RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 KLF11O14901 512 aa10.02□□□□□ -0.81
RTN3-204ENST00000354497 ZIC3O60481 467 aa10.02□□□□□ -0.81
RTN3-204ENST00000354497 CD3EP07766 207 aa10.02□□□□□ -0.81
RTN3-204ENST00000354497 SRD5A1P18405 259 aa10.02□□□□□ -0.81
RTN3-204ENST00000354497 GRK2P25098 689 aa10.02□□□□□ -0.81
RTN3-204ENST00000354497 BSGP35613 385 aa10.02□□□□□ -0.81
RTN3-204ENST00000354497 KRT20P35900 424 aa10.02□□□□□ -0.81
RTN3-204ENST00000354497 CTBP2P56545 445 aa10.02□□□□□ -0.81
RTN3-204ENST00000354497 B3GALT5-AS1P59052 145 aa10.02□□□□□ -0.81
RTN3-204ENST00000354497 BAMBIQ13145 260 aa10.02□□□□□ -0.81
RTN3-204ENST00000354497 IKZF1Q13422 519 aa10.02□□□□□ -0.81
RTN3-204ENST00000354497 CTU2Q2VPK5 515 aaKnown RBP10.02□□□□□ -0.81
RTN3-204ENST00000354497 C1orf146Q5VVC0 180 aa10.02□□□□□ -0.81
RTN3-204ENST00000354497 MRM1Q6IN84 353 aaKnown RBP10.02□□□□□ -0.81
RTN3-204ENST00000354497 GRHL2Q6ISB3 625 aa10.02□□□□□ -0.81
RTN3-204ENST00000354497 FAM111BQ6SJ93 734 aa10.02□□□□□ -0.81
RTN3-204ENST00000354497 STAC2Q6ZMT1 411 aa10.02□□□□□ -0.81
RTN3-204ENST00000354497 CCDC25Q86WR0 208 aa10.02□□□□□ -0.81
RTN3-204ENST00000354497 ZNF619Q8N2I2 560 aa10.02□□□□□ -0.81
RTN3-204ENST00000354497 ARIH2OSQ8N7S6 290 aa10.02□□□□□ -0.81
RTN3-204ENST00000354497 HPS1Q92902 700 aa10.02□□□□□ -0.81
RTN3-204ENST00000354497 VPS33AQ96AX1 596 aa10.02□□□□□ -0.81
RTN3-204ENST00000354497 OPALINQ96PE5 141 aa10.02□□□□□ -0.81
RTN3-204ENST00000354497 ADOQ96SZ5 270 aa10.02□□□□□ -0.81
RTN3-204ENST00000354497 BCL7BQ9BQE9 202 aa10.02□□□□□ -0.81
RTN3-204ENST00000354497 YTHDF1Q9BYJ9 559 aaKnown RBP10.02□□□□□ -0.81
RTN3-204ENST00000354497 ARMC7Q9H6L4 198 aa10.02□□□□□ -0.81
RTN3-204ENST00000354497 PLAC1Q9HBJ0 212 aa10.02□□□□□ -0.81
RTN3-204ENST00000354497 OPTCQ9UBM4 332 aa10.02□□□□□ -0.81
RTN3-204ENST00000354497 POU2F3Q9UKI9 436 aa10.02□□□□□ -0.81
RTN3-204ENST00000354497 ZNF175Q9Y473 711 aa10.02□□□□□ -0.81
RTN3-204ENST00000354497 HNRNPCL2B2RXH8 293 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 SUPT3HB4E1H0 165 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 H3BNH8 94 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 PHGDHO43175 533 aaKnown RBP10.01□□□□□ -0.81
RTN3-204ENST00000354497 TNFRSF21O75509 655 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 DANCRP0C864 163 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 FCGR2AP12318 317 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 CPMP14384 443 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 PTNP21246 168 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 PTX3P26022 381 aaPredicted RBP10.01□□□□□ -0.81
RTN3-204ENST00000354497 IL12BP29460 328 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 RCVRNP35243 200 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 HAAOP46952 286 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 NUDT6P53370 316 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 PLTPP55058 493 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 TMBIM6P55061 237 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 CLDN15P56746 228 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 CLDN20P56880 219 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 GTF2IRD2BQ6EKJ0 949 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 CORO6Q6QEF8 472 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 CLEC2AQ6UVW9 174 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 GTF2IRD2Q86UP8 949 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 TRABD2AQ86V40 505 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 OR52R1Q8NGF1 315 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 OR6K3Q8NGY3 331 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 ENKURQ8TC29 256 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 C12orf43Q96C57 262 aaKnown RBP10.01□□□□□ -0.81
RTN3-204ENST00000354497 DSN1Q9H410 356 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 CHODLQ9H9P2 273 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 FOLH1BQ9HBA9 442 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 POPDC3Q9HBV1 291 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 SMYD2Q9NRG4 433 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 FARSBQ9NSD9 589 aaKnown RBP10.01□□□□□ -0.81
RTN3-204ENST00000354497 PPP1R14DQ9NXH3 145 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 PPP4R1LQ9P1A2 415 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 PLLPQ9Y342 182 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 ZNF337Q9Y3M9 751 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 AP4B1Q9Y6B7 739 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 EXPH5Q8NEV8 1989 aa10.01□□□□□ -0.81
RTN3-204ENST00000354497 DNALI1O14645 258 aaPredicted RBP10□□□□□ -0.81
RTN3-204ENST00000354497 TM9SF1O15321 606 aa10□□□□□ -0.81
RTN3-204ENST00000354497 SPRY1O43609 319 aaPredicted RBP10□□□□□ -0.81
RTN3-204ENST00000354497 DLX3O60479 287 aa10□□□□□ -0.81
RTN3-204ENST00000354497 ERAL1O75616 437 aaKnown RBP10□□□□□ -0.81
RTN3-204ENST00000354497 AQP8O94778 261 aa10□□□□□ -0.81
RTN3-204ENST00000354497 BAG2O95816 211 aa10□□□□□ -0.81
RTN3-204ENST00000354497 CD1DP15813 335 aa10□□□□□ -0.81
RTN3-204ENST00000354497 IMPDH1P20839 514 aa10□□□□□ -0.81
RTN3-204ENST00000354497 S1PR1P21453 382 aa10□□□□□ -0.81
RTN3-204ENST00000354497 FEN1P39748 380 aaKnown RBP10□□□□□ -0.81
RTN3-204ENST00000354497 PIK3CBP42338 1070 aa10□□□□□ -0.81
RTN3-204ENST00000354497 DSCR4P56555 118 aaPredicted RBP10□□□□□ -0.81
RTN3-204ENST00000354497 STX5Q13190 355 aa10□□□□□ -0.81
RTN3-204ENST00000354497 ZNF672Q499Z4 452 aaPredicted RBP10□□□□□ -0.81
RTN3-204ENST00000354497 CDKL4Q5MAI5 379 aa10□□□□□ -0.81
RTN3-204ENST00000354497 CYB5R2Q6BCY4 276 aa10□□□□□ -0.81
RTN3-204ENST00000354497 ADAM5Q6NVV9 412 aa10□□□□□ -0.81
RTN3-204ENST00000354497 AKAP14Q86UN6 197 aa10□□□□□ -0.81
RTN3-204ENST00000354497 PQLC1Q8N2U9 271 aa10□□□□□ -0.81
RTN3-204ENST00000354497 ANKRD42Q8N9B4 389 aa10□□□□□ -0.81
RTN3-204ENST00000354497 KBTBD8Q8NFY9 601 aa10□□□□□ -0.81
RTN3-204ENST00000354497 PNPT1Q8TCS8 783 aaKnown RBP10□□□□□ -0.81
RTN3-204ENST00000354497 GRK7Q8WTQ7 553 aa10□□□□□ -0.81
RTN3-204ENST00000354497 ROBO4Q8WZ75 1007 aa10□□□□□ -0.81
RTN3-204ENST00000354497 S100PBPQ96BU1 408 aa10□□□□□ -0.81
RTN3-204ENST00000354497 TNFRSF13CQ96RJ3 184 aa10□□□□□ -0.81
RTN3-204ENST00000354497 TRAF4Q9BUZ4 470 aaPredicted RBP10□□□□□ -0.81
RTN3-204ENST00000354497 ZNF717Q9BY31 904 aaPredicted RBP10□□□□□ -0.81
RTN3-204ENST00000354497 PLA2G12AQ9BZM1 189 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms