RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 HAVCR2Q8TDQ0 301 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 CDKN2AIPNLQ96HQ2 116 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 KATNBL1Q9H079 304 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 ISG20L2Q9H9L3 353 aaKnown RBP9.91□□□□□ -0.82
CAPN3-203ENST00000349748 TLR8Q9NR97 1041 aaKnown RBP9.91□□□□□ -0.82
CAPN3-203ENST00000349748 ENPP4Q9Y6X5 453 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 TRAV14DV4A0A0A6YYC5 116 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 TMEM272A0A1B0GTI8 110 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 KANTRA0A1W2PQU2 76 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 TRBC2A0A5B9 178 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 TMEM189-UBE2V1I3L0A0 370 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 PYCARD-AS1I3L0S3 204 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 SULT2B1O00204 365 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 PGRMC2O15173 223 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 EFCAB14O75071 495 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 ACKR3P25106 362 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 HGFACQ04756 655 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 TNFRSF9Q07011 255 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 NAE1Q13564 534 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 ZNF805Q5CZA5 627 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 ARSIQ5FYB1 569 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 CTSL3PQ5NE16 218 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 SBSNQ6UWP8 590 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 GPRIN1Q7Z2K8 1008 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 LRRC52Q8N7C0 313 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 OR52I2Q8NH67 350 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 ZNF296Q8WUU4 475 aaPredicted RBP9.9□□□□□ -0.82
CAPN3-203ENST00000349748 SMIM4Q8WVI0 70 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 TEAD3Q99594 435 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 MRPS30Q9NP92 439 aaKnown RBP9.9□□□□□ -0.82
CAPN3-203ENST00000349748 STOX2Q9P2F5 926 aaPredicted RBP9.9□□□□□ -0.82
CAPN3-203ENST00000349748 ZDHHC8Q9ULC8 765 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 A0A0G2JK05 382 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 A0A1W2PPK0 400 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 H7C1Q1 480 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 IMPA2O14732 288 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 RGS9O75916 674 aaPredicted RBP9.9□□□□□ -0.82
CAPN3-203ENST00000349748 MT-ND4LP03901 98 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 S100A2P29034 98 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 CCND3P30281 292 aaPredicted RBP9.9□□□□□ -0.82
CAPN3-203ENST00000349748 AHRP35869 848 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 CSNK1EP49674 416 aaKnown RBP9.9□□□□□ -0.82
CAPN3-203ENST00000349748 RAB40BQ12829 278 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 ZNF239Q16600 458 aaKnown RBP9.9□□□□□ -0.82
CAPN3-203ENST00000349748 DUSP28Q4G0W2 176 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 ZNF467Q7Z7K2 595 aaPredicted RBP9.9□□□□□ -0.82
CAPN3-203ENST00000349748 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.9□□□□□ -0.82
CAPN3-203ENST00000349748 LRRC18Q8N456 261 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 LINC01465Q8N7H1 131 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 ZNF248Q8NDW4 579 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 OR2L5Q8NG80 312 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 GEMIN6Q8WXD5 167 aaKnown RBP9.9□□□□□ -0.82
CAPN3-203ENST00000349748 OSTF1Q92882 214 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 NECAB3Q96P71 396 aaPredicted RBP9.9□□□□□ -0.82
CAPN3-203ENST00000349748 TMEM138Q9NPI0 162 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 RPS10P5Q9NQ39 176 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 SIRT7Q9NRC8 400 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 GPATCH2Q9NW75 528 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 MAP4K5Q9Y4K4 846 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 ZSWIM8A7E2V4 1837 aa9.9□□□□□ -0.82
CAPN3-203ENST00000349748 EREGO14944 169 aa9.9□□□□□ -0.83
CAPN3-203ENST00000349748 LGALS2P05162 132 aa9.9□□□□□ -0.83
CAPN3-203ENST00000349748 GKN3PP0CG01 181 aa9.9□□□□□ -0.83
CAPN3-203ENST00000349748 PKMP14618 531 aaKnown RBP9.9□□□□□ -0.83
CAPN3-203ENST00000349748 TBXA2RP21731 343 aa9.9□□□□□ -0.83
CAPN3-203ENST00000349748 PAX6P26367 422 aa9.9□□□□□ -0.83
CAPN3-203ENST00000349748 PITPNAQ00169 270 aa9.9□□□□□ -0.83
CAPN3-203ENST00000349748 MTAPQ13126 283 aa9.9□□□□□ -0.83
CAPN3-203ENST00000349748 SCARB2Q14108 478 aa9.9□□□□□ -0.83
CAPN3-203ENST00000349748 MAJINQ3KP22 176 aa9.9□□□□□ -0.83
CAPN3-203ENST00000349748 LRRC37A5PQ49AS3 106 aa9.9□□□□□ -0.83
CAPN3-203ENST00000349748 FBXO47Q5MNV8 452 aa9.9□□□□□ -0.83
CAPN3-203ENST00000349748 FAM69AQ5T7M9 428 aa9.9□□□□□ -0.83
CAPN3-203ENST00000349748 KIAA1161Q6NSJ0 714 aa9.9□□□□□ -0.83
CAPN3-203ENST00000349748 TSSK4Q6SA08 328 aa9.9□□□□□ -0.83
CAPN3-203ENST00000349748 SMARCD3Q6STE5 483 aa9.9□□□□□ -0.83
CAPN3-203ENST00000349748 UNQ6126/PRO20091Q6UXV3 157 aa9.9□□□□□ -0.83
CAPN3-203ENST00000349748 RNF165Q6ZSG1 346 aa9.9□□□□□ -0.83
CAPN3-203ENST00000349748 SYT12Q8IV01 421 aa9.9□□□□□ -0.83
CAPN3-203ENST00000349748 OR2AK2Q8NG84 335 aa9.9□□□□□ -0.83
CAPN3-203ENST00000349748 OR6X1Q8NH79 312 aa9.9□□□□□ -0.83
CAPN3-203ENST00000349748 ZNF354BQ96LW1 612 aa9.9□□□□□ -0.83
CAPN3-203ENST00000349748 MGME1Q9BQP7 344 aa9.9□□□□□ -0.83
CAPN3-203ENST00000349748 CHST5Q9GZS9 411 aa9.9□□□□□ -0.83
CAPN3-203ENST00000349748 FGF20Q9NP95 211 aaPredicted RBP9.9□□□□□ -0.83
CAPN3-203ENST00000349748 WWOXQ9NZC7 414 aa9.9□□□□□ -0.83
CAPN3-203ENST00000349748 RCC2Q9P258 522 aaKnown RBP9.9□□□□□ -0.83
CAPN3-203ENST00000349748 EXOSC1Q9Y3B2 195 aaKnown RBP9.9□□□□□ -0.83
CAPN3-203ENST00000349748 TSTD3H0UI37 97 aa9.89□□□□□ -0.83
CAPN3-203ENST00000349748 INHAP05111 366 aa9.89□□□□□ -0.83
CAPN3-203ENST00000349748 PRPS2P11908 318 aa9.89□□□□□ -0.83
CAPN3-203ENST00000349748 ZNF25P17030 456 aaPredicted RBP9.89□□□□□ -0.83
CAPN3-203ENST00000349748 RAB5AP20339 215 aa9.89□□□□□ -0.83
CAPN3-203ENST00000349748 DCTDP32321 178 aa9.89□□□□□ -0.83
CAPN3-203ENST00000349748 PKIAP61925 76 aa9.89□□□□□ -0.83
CAPN3-203ENST00000349748 ACVR1Q04771 509 aa9.89□□□□□ -0.83
CAPN3-203ENST00000349748 PDZD11Q5EBL8 140 aa9.89□□□□□ -0.83
CAPN3-203ENST00000349748 PSAPL1Q6NUJ1 521 aa9.89□□□□□ -0.83
CAPN3-203ENST00000349748 PRICKLE2Q7Z3G6 844 aa9.89□□□□□ -0.83
CAPN3-203ENST00000349748 LRRTM4Q86VH4 590 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms