RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 UCKL1Q9NWZ5 548 aa19.7■□□□□ 0.74
PTPN18-202ENST00000347849 EXTL2Q9UBQ6 330 aa19.7■□□□□ 0.74
PTPN18-202ENST00000347849 A0A0A6YYC8 382 aaPredicted RBP19.69■□□□□ 0.74
PTPN18-202ENST00000347849 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.69■□□□□ 0.74
PTPN18-202ENST00000347849 I3L1I5 382 aaPredicted RBP19.69■□□□□ 0.74
PTPN18-202ENST00000347849 ZNF10P21506 573 aaPredicted RBP19.69■□□□□ 0.74
PTPN18-202ENST00000347849 BCKDHBP21953 392 aa19.69■□□□□ 0.74
PTPN18-202ENST00000347849 PTBP1P26599 531 aaKnown RBP eCLIP19.69■□□□□ 0.746e-8■■■■■ 44.3
PTPN18-202ENST00000347849 TRHRP34981 398 aaPredicted RBP19.69■□□□□ 0.74
PTPN18-202ENST00000347849 NUDT1P36639 197 aa19.69■□□□□ 0.74
PTPN18-202ENST00000347849 WDR45BQ5MNZ6 344 aa19.69■□□□□ 0.74
PTPN18-202ENST00000347849 IDNKQ5T6J7 187 aa19.69■□□□□ 0.74
PTPN18-202ENST00000347849 CDC73Q6P1J9 531 aa19.69■□□□□ 0.74
PTPN18-202ENST00000347849 SPRYD4Q8WW59 207 aaPredicted RBP19.69■□□□□ 0.74
PTPN18-202ENST00000347849 ANKRD9Q96BM1 317 aaPredicted RBP19.69■□□□□ 0.74
PTPN18-202ENST00000347849 PINK1Q9BXM7 581 aa19.69■□□□□ 0.74
PTPN18-202ENST00000347849 LEUTXA8MZ59 168 aa19.69■□□□□ 0.74
PTPN18-202ENST00000347849 KDM4EB2RXH2 506 aaPredicted RBP19.69■□□□□ 0.74
PTPN18-202ENST00000347849 CASC3O15234 703 aaKnown RBP19.69■□□□□ 0.74
PTPN18-202ENST00000347849 LANCL1O43813 399 aa19.69■□□□□ 0.74
PTPN18-202ENST00000347849 PAHP00439 452 aa19.69■□□□□ 0.74
PTPN18-202ENST00000347849 NT5EP21589 574 aa19.69■□□□□ 0.74
PTPN18-202ENST00000347849 ATP6V1E1P36543 226 aa19.69■□□□□ 0.74
PTPN18-202ENST00000347849 GFERP55789 205 aa19.69■□□□□ 0.74
PTPN18-202ENST00000347849 GPR176Q14439 515 aa19.69■□□□□ 0.74
PTPN18-202ENST00000347849 ESCO2Q56NI9 601 aa19.69■□□□□ 0.74
PTPN18-202ENST00000347849 SLC30A6Q6NXT4 461 aa19.69■□□□□ 0.74
PTPN18-202ENST00000347849 PHF21AQ96BD5 680 aa19.69■□□□□ 0.74
PTPN18-202ENST00000347849 FAM46AQ96IP4 442 aaKnown RBP19.69■□□□□ 0.74
PTPN18-202ENST00000347849 MAP6Q96JE9 813 aa19.69■□□□□ 0.74
PTPN18-202ENST00000347849 SPATA5L1Q9BVQ7 753 aa19.69■□□□□ 0.74
PTPN18-202ENST00000347849 MAT2BQ9NZL9 334 aa19.69■□□□□ 0.74
PTPN18-202ENST00000347849 DMDP11532 3685 aa19.68■□□□□ 0.74
PTPN18-202ENST00000347849 A0A0A6YYJ9 748 aa19.68■□□□□ 0.74
PTPN18-202ENST00000347849 A0A1B0GVC2 190 aa19.68■□□□□ 0.74
PTPN18-202ENST00000347849 A6NIN4 97 aa19.68■□□□□ 0.74
PTPN18-202ENST00000347849 GTPBP1O00178 669 aaKnown RBP19.68■□□□□ 0.74
PTPN18-202ENST00000347849 GPR75O95800 540 aa19.68■□□□□ 0.74
PTPN18-202ENST00000347849 CSNK1EP49674 416 aaKnown RBP19.68■□□□□ 0.74
PTPN18-202ENST00000347849 STARD6P59095 220 aa19.68■□□□□ 0.74
PTPN18-202ENST00000347849 MGAT2Q10469 447 aa19.68■□□□□ 0.74
PTPN18-202ENST00000347849 RIN1Q13671 783 aa19.68■□□□□ 0.74
PTPN18-202ENST00000347849 GNA13Q14344 377 aa19.68■□□□□ 0.74
PTPN18-202ENST00000347849 ELOCQ15369 112 aa19.68■□□□□ 0.74
PTPN18-202ENST00000347849 KLBQ86Z14 1044 aa19.68■□□□□ 0.74
PTPN18-202ENST00000347849 TIGD4Q8IY51 512 aa19.68■□□□□ 0.74
PTPN18-202ENST00000347849 CREB3L1Q96BA8 519 aa19.68■□□□□ 0.74
PTPN18-202ENST00000347849 ADAM30Q9UKF2 790 aa19.68■□□□□ 0.74
PTPN18-202ENST00000347849 AKAP8O43823 692 aaKnown RBP19.68■□□□□ 0.74
PTPN18-202ENST00000347849 CDC123O75794 336 aaPredicted RBP19.68■□□□□ 0.74
PTPN18-202ENST00000347849 FASLGP48023 281 aa19.68■□□□□ 0.74
PTPN18-202ENST00000347849 TAS2R41P59536 307 aa19.68■□□□□ 0.74
PTPN18-202ENST00000347849 MAT1AQ00266 395 aaKnown RBP19.68■□□□□ 0.74
PTPN18-202ENST00000347849 ERV3-1Q14264 604 aa19.68■□□□□ 0.74
PTPN18-202ENST00000347849 NKAIN2Q5VXU1 208 aa19.68■□□□□ 0.74
PTPN18-202ENST00000347849 SLC38A6Q8IZM9 456 aa19.68■□□□□ 0.74
PTPN18-202ENST00000347849 C9orf62Q8N4C0 152 aa19.68■□□□□ 0.74
PTPN18-202ENST00000347849 ZNF655Q8N720 491 aaPredicted RBP19.68■□□□□ 0.74
PTPN18-202ENST00000347849 C1orf216Q8TAB5 229 aa19.68■□□□□ 0.74
PTPN18-202ENST00000347849 GNPDA2Q8TDQ7 276 aa19.68■□□□□ 0.74
PTPN18-202ENST00000347849 ARSGQ96EG1 525 aa19.68■□□□□ 0.74
PTPN18-202ENST00000347849 TRAF4Q9BUZ4 470 aaPredicted RBP19.68■□□□□ 0.74
PTPN18-202ENST00000347849 ATP13A2Q9NQ11 1180 aa19.68■□□□□ 0.74
PTPN18-202ENST00000347849 HCN3Q9P1Z3 774 aa19.68■□□□□ 0.74
PTPN18-202ENST00000347849 IL20RAQ9UHF4 553 aa19.68■□□□□ 0.74
PTPN18-202ENST00000347849 C19orf53Q9UNZ5 99 aaPredicted RBP19.68■□□□□ 0.74
PTPN18-202ENST00000347849 LIPT1Q9Y234 373 aa19.68■□□□□ 0.74
PTPN18-202ENST00000347849 SPAG17Q6Q759 2223 aa19.68■□□□□ 0.74
PTPN18-202ENST00000347849 CPSF4LA6NMK7 179 aaKnown RBP19.67■□□□□ 0.74
PTPN18-202ENST00000347849 CHST10O43529 356 aa19.67■□□□□ 0.74
PTPN18-202ENST00000347849 ATP1B1P05026 303 aa19.67■□□□□ 0.74
PTPN18-202ENST00000347849 DSG2Q14126 1118 aa19.67■□□□□ 0.74
PTPN18-202ENST00000347849 FCN2Q15485 313 aa19.67■□□□□ 0.74
PTPN18-202ENST00000347849 PRICKLE4Q2TBC4 344 aa19.67■□□□□ 0.74
PTPN18-202ENST00000347849 TMEM91Q6ZNR0 172 aa19.67■□□□□ 0.74
PTPN18-202ENST00000347849 RRM2BQ7LG56 351 aa19.67■□□□□ 0.74
PTPN18-202ENST00000347849 KLHL36Q8N4N3 616 aa19.67■□□□□ 0.74
PTPN18-202ENST00000347849 POGLUT1Q8NBL1 392 aa19.67■□□□□ 0.74
PTPN18-202ENST00000347849 SECISBP2Q96T21 854 aaKnown RBP19.67■□□□□ 0.74
PTPN18-202ENST00000347849 CDX2Q99626 313 aaPredicted RBP19.67■□□□□ 0.74
PTPN18-202ENST00000347849 COQ7Q99807 217 aa19.67■□□□□ 0.74
PTPN18-202ENST00000347849 SEMA4GQ9NTN9 838 aa19.67■□□□□ 0.74
PTPN18-202ENST00000347849 NPIPA5A0A0B4J1W7 369 aa19.67■□□□□ 0.74
PTPN18-202ENST00000347849 NPIPA7E9PJI5 369 aa19.67■□□□□ 0.74
PTPN18-202ENST00000347849 TGFBR3LH3BV60 316 aa19.67■□□□□ 0.74
PTPN18-202ENST00000347849 NPIPA8P0DM63 369 aa19.67■□□□□ 0.74
PTPN18-202ENST00000347849 PTNP21246 168 aa19.67■□□□□ 0.74
PTPN18-202ENST00000347849 CAPZBP47756 277 aa19.67■□□□□ 0.74
PTPN18-202ENST00000347849 MAPK14Q16539 360 aa19.67■□□□□ 0.74
PTPN18-202ENST00000347849 MANEAQ5SRI9 462 aa19.67■□□□□ 0.74
PTPN18-202ENST00000347849 PRAMEF8Q5VWM4 474 aa19.67■□□□□ 0.74
PTPN18-202ENST00000347849 PRAMEF7Q5VXH5 474 aa19.67■□□□□ 0.74
PTPN18-202ENST00000347849 MRGPREQ86SM8 312 aa19.67■□□□□ 0.74
PTPN18-202ENST00000347849 NR2C2APQ86WQ0 139 aa19.67■□□□□ 0.74
PTPN18-202ENST00000347849 BBS1Q8NFJ9 593 aa19.67■□□□□ 0.74
PTPN18-202ENST00000347849 DNAJA4Q8WW22 397 aaPredicted RBP19.67■□□□□ 0.74
PTPN18-202ENST00000347849 ART5Q96L15 291 aa19.67■□□□□ 0.74
PTPN18-202ENST00000347849 PTGFRNQ9P2B2 879 aa19.67■□□□□ 0.74
PTPN18-202ENST00000347849 MRPS17Q9Y2R5 130 aaKnown RBP19.67■□□□□ 0.74
PTPN18-202ENST00000347849 PCDH15Q96QU1 1955 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms