RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 ZFYVE26Q68DK2 2539 aa17.25■□□□□ 0.35
CHMP4A-201ENST00000347519 A0A0B4J2E0 115 aa17.25■□□□□ 0.35
CHMP4A-201ENST00000347519 A0A1B0GX12 115 aa17.25■□□□□ 0.35
CHMP4A-201ENST00000347519 TRAPPC13A5PLN9 417 aa17.25■□□□□ 0.35
CHMP4A-201ENST00000347519 OR5F1O95221 314 aa17.25■□□□□ 0.35
CHMP4A-201ENST00000347519 PGCP20142 388 aa17.25■□□□□ 0.35
CHMP4A-201ENST00000347519 PTNP21246 168 aa17.25■□□□□ 0.35
CHMP4A-201ENST00000347519 SESN3P58005 492 aa17.25■□□□□ 0.35
CHMP4A-201ENST00000347519 LSM11P83369 360 aaKnown RBP eCLIP17.25■□□□□ 0.35
CHMP4A-201ENST00000347519 PMP22Q01453 160 aa17.25■□□□□ 0.35
CHMP4A-201ENST00000347519 LAPTM4AQ15012 233 aa17.25■□□□□ 0.35
CHMP4A-201ENST00000347519 PLPPR5Q32ZL2 321 aa17.25■□□□□ 0.35
CHMP4A-201ENST00000347519 CYP4Z1Q86W10 505 aa17.25■□□□□ 0.35
CHMP4A-201ENST00000347519 NKAIN4Q8IVV8 208 aa17.25■□□□□ 0.35
CHMP4A-201ENST00000347519 OFCC1Q8IZS5 231 aa17.25■□□□□ 0.35
CHMP4A-201ENST00000347519 OR4C15Q8NGM1 316 aa17.25■□□□□ 0.35
CHMP4A-201ENST00000347519 ZNF563Q8TA94 476 aa17.25■□□□□ 0.35
CHMP4A-201ENST00000347519 POC1BQ8TC44 478 aa17.25■□□□□ 0.35
CHMP4A-201ENST00000347519 C3orf49Q96BT1 292 aa17.25■□□□□ 0.35
CHMP4A-201ENST00000347519 FUZQ9BT04 418 aa17.25■□□□□ 0.35
CHMP4A-201ENST00000347519 SLC7A7Q9UM01 511 aa17.25■□□□□ 0.35
CHMP4A-201ENST00000347519 C15orf41Q9Y2V0 281 aa17.25■□□□□ 0.35
CHMP4A-201ENST00000347519 PCDHGB7Q9Y5F8 929 aa17.25■□□□□ 0.35
CHMP4A-201ENST00000347519 LYVE1Q9Y5Y7 322 aa17.25■□□□□ 0.35
CHMP4A-201ENST00000347519 U3KQV3 271 aa17.25■□□□□ 0.35
CHMP4A-201ENST00000347519 NBEAQ8NFP9 2946 aa17.24■□□□□ 0.35
CHMP4A-201ENST00000347519 TRAV17A0A0B4J275 112 aa17.24■□□□□ 0.35
CHMP4A-201ENST00000347519 TRBV4-1A0A0J9YWV2 114 aa17.24■□□□□ 0.35
CHMP4A-201ENST00000347519 DEAF1O75398 565 aaPredicted RBP17.24■□□□□ 0.35
CHMP4A-201ENST00000347519 H1F0P07305 194 aaKnown RBP17.24■□□□□ 0.35
CHMP4A-201ENST00000347519 FCGR1AP12314 374 aa17.24■□□□□ 0.35
CHMP4A-201ENST00000347519 PRKCAP17252 672 aa17.24■□□□□ 0.35
CHMP4A-201ENST00000347519 LIMS1P48059 325 aa17.24■□□□□ 0.35
CHMP4A-201ENST00000347519 WBP2NLQ6ICG8 309 aa17.24■□□□□ 0.35
CHMP4A-201ENST00000347519 ZNF613Q6PF04 617 aa17.24■□□□□ 0.35
CHMP4A-201ENST00000347519 Q6ZS92 163 aa17.24■□□□□ 0.35
CHMP4A-201ENST00000347519 HS3ST5Q8IZT8 346 aa17.24■□□□□ 0.35
CHMP4A-201ENST00000347519 TMEM178AQ8NBL3 297 aa17.24■□□□□ 0.35
CHMP4A-201ENST00000347519 OR5M1Q8NGP8 315 aa17.24■□□□□ 0.35
CHMP4A-201ENST00000347519 TM9SF4Q92544 642 aa17.24■□□□□ 0.35
CHMP4A-201ENST00000347519 FNDC11Q9BVV2 318 aa17.24■□□□□ 0.35
CHMP4A-201ENST00000347519 ADAM19Q9H013 955 aa17.24■□□□□ 0.35
CHMP4A-201ENST00000347519 UBQLN3Q9H347 655 aa17.24■□□□□ 0.35
CHMP4A-201ENST00000347519 ZNF71Q9NQZ8 489 aaPredicted RBP17.24■□□□□ 0.35
CHMP4A-201ENST00000347519 BOKQ9UMX3 212 aaPredicted RBP17.24■□□□□ 0.35
CHMP4A-201ENST00000347519 LHX6Q9UPM6 363 aa17.24■□□□□ 0.35
CHMP4A-201ENST00000347519 MAGED1Q9Y5V3 778 aaPredicted RBP17.24■□□□□ 0.35
CHMP4A-201ENST00000347519 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.23■□□□□ 0.35
CHMP4A-201ENST00000347519 GNGT2O14610 69 aa17.23■□□□□ 0.35
CHMP4A-201ENST00000347519 ZIC3O60481 467 aa17.23■□□□□ 0.35
CHMP4A-201ENST00000347519 DPM1O60762 260 aa17.23■□□□□ 0.35
CHMP4A-201ENST00000347519 GLSO94925 669 aaPredicted RBP17.23■□□□□ 0.35
CHMP4A-201ENST00000347519 GADD45GO95257 159 aa17.23■□□□□ 0.35
CHMP4A-201ENST00000347519 GP1BBP13224 206 aa17.23■□□□□ 0.35
CHMP4A-201ENST00000347519 ELAVL4P26378 380 aaKnown RBP17.23■□□□□ 0.35
CHMP4A-201ENST00000347519 SLC1A3P43003 542 aa17.23■□□□□ 0.35
CHMP4A-201ENST00000347519 COPZ1P61923 177 aa17.23■□□□□ 0.35
CHMP4A-201ENST00000347519 FOXF1Q12946 379 aa17.23■□□□□ 0.35
CHMP4A-201ENST00000347519 SEC23BQ15437 767 aa17.23■□□□□ 0.35
CHMP4A-201ENST00000347519 EXOC3L2Q2M3D2 409 aa17.23■□□□□ 0.35
CHMP4A-201ENST00000347519 RNFT1Q5M7Z0 435 aa17.23■□□□□ 0.35
CHMP4A-201ENST00000347519 ANKRD34AQ69YU3 496 aa17.23■□□□□ 0.35
CHMP4A-201ENST00000347519 ASB18Q6ZVZ8 466 aa17.23■□□□□ 0.35
CHMP4A-201ENST00000347519 ATG4DQ86TL0 474 aaPredicted RBP17.23■□□□□ 0.35
CHMP4A-201ENST00000347519 EXD3Q8N9H8 876 aa17.23■□□□□ 0.35
CHMP4A-201ENST00000347519 CENPNQ96H22 339 aaPredicted RBP17.23■□□□□ 0.35
CHMP4A-201ENST00000347519 TTTY12Q9BZ98 90 aa17.23■□□□□ 0.35
CHMP4A-201ENST00000347519 POLR2J2Q9GZM3 115 aaKnown RBP17.23■□□□□ 0.35
CHMP4A-201ENST00000347519 POLR2J3Q9H1A7 115 aaKnown RBP17.23■□□□□ 0.35
CHMP4A-201ENST00000347519 RPS6KB2Q9UBS0 482 aa17.23■□□□□ 0.35
CHMP4A-201ENST00000347519 SAMHD1Q9Y3Z3 626 aaKnown RBP17.23■□□□□ 0.35
CHMP4A-201ENST00000347519 PCDHGB6Q9Y5F9 930 aa17.23■□□□□ 0.35
CHMP4A-201ENST00000347519 SAC3D1A6NKF1 404 aa17.22■□□□□ 0.35
CHMP4A-201ENST00000347519 FAM166BA8MTA8 275 aa17.22■□□□□ 0.35
CHMP4A-201ENST00000347519 KLRC4-KLRK1H3BQV0 150 aa17.22■□□□□ 0.35
CHMP4A-201ENST00000347519 TNFRSF11BO00300 401 aa17.22■□□□□ 0.35
CHMP4A-201ENST00000347519 ETV2O00321 342 aaPredicted RBP17.22■□□□□ 0.35
CHMP4A-201ENST00000347519 EFNA2O43921 213 aa17.22■□□□□ 0.35
CHMP4A-201ENST00000347519 CBR3O75828 277 aa17.22■□□□□ 0.35
CHMP4A-201ENST00000347519 HK1P19367 917 aa17.22■□□□□ 0.35
CHMP4A-201ENST00000347519 DPP4P27487 766 aa17.22■□□□□ 0.35
CHMP4A-201ENST00000347519 TACR3P29371 465 aa17.22■□□□□ 0.35
CHMP4A-201ENST00000347519 HMGA2P52926 109 aa17.22■□□□□ 0.35
CHMP4A-201ENST00000347519 DLX5P56178 289 aa17.22■□□□□ 0.35
CHMP4A-201ENST00000347519 ST3GAL3Q11203 375 aa17.22■□□□□ 0.35
CHMP4A-201ENST00000347519 ZNF169Q14929 603 aaPredicted RBP17.22■□□□□ 0.35
CHMP4A-201ENST00000347519 ALG10BQ5I7T1 473 aa17.22■□□□□ 0.35
CHMP4A-201ENST00000347519 PODNL1Q6PEZ8 512 aa17.22■□□□□ 0.35
CHMP4A-201ENST00000347519 TBPL2Q6SJ96 375 aa17.22■□□□□ 0.35
CHMP4A-201ENST00000347519 EPHX4Q8IUS5 362 aa17.22■□□□□ 0.35
CHMP4A-201ENST00000347519 TMEM251Q8N6I4 163 aa17.22■□□□□ 0.35
CHMP4A-201ENST00000347519 ZFP62Q8NB50 900 aaPredicted RBP17.22■□□□□ 0.35
CHMP4A-201ENST00000347519 ICA1LQ8NDH6 482 aa17.22■□□□□ 0.35
CHMP4A-201ENST00000347519 RNF217Q8TC41 542 aa17.22■□□□□ 0.35
CHMP4A-201ENST00000347519 SLC7A13Q8TCU3 470 aa17.22■□□□□ 0.35
CHMP4A-201ENST00000347519 UBL7Q96S82 380 aaPredicted RBP17.22■□□□□ 0.35
CHMP4A-201ENST00000347519 ZNF703Q9H7S9 590 aaPredicted RBP17.22■□□□□ 0.35
CHMP4A-201ENST00000347519 PTGES2Q9H7Z7 377 aa17.22■□□□□ 0.35
CHMP4A-201ENST00000347519 REEP1Q9H902 201 aa17.22■□□□□ 0.35
CHMP4A-201ENST00000347519 C6orf203Q9P0P8 240 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms