RNA–Protein interactions for RNA: ENST00000347055.3

KRCC1-201, Transcript of lysine rich coiled-coil 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRCC1, Length 1,753 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1-201ENST00000347055 MTG2Q9H4K7 406 aa16.87■□□□□ 0.29
KRCC1-201ENST00000347055 NRIP3Q9NQ35 241 aa16.87■□□□□ 0.29
KRCC1-201ENST00000347055 PRDM7Q9NQW5 492 aa16.87■□□□□ 0.29
KRCC1-201ENST00000347055 PCDH10Q9P2E7 1040 aa16.87■□□□□ 0.29
KRCC1-201ENST00000347055 TBC1D3EA0A087X179 549 aa16.87■□□□□ 0.29
KRCC1-201ENST00000347055 OR2M5A3KFT3 312 aa16.87■□□□□ 0.29
KRCC1-201ENST00000347055 GPR89AB7ZAQ6 455 aa16.87■□□□□ 0.29
KRCC1-201ENST00000347055 KPNA3O00505 521 aaPredicted RBP16.87■□□□□ 0.29
KRCC1-201ENST00000347055 GPR89BP0CG08 455 aa16.87■□□□□ 0.29
KRCC1-201ENST00000347055 SNRPBP14678 240 aaKnown RBP16.87■□□□□ 0.29
KRCC1-201ENST00000347055 GJA1P17302 382 aa16.87■□□□□ 0.29
KRCC1-201ENST00000347055 NFYAP23511 347 aaPredicted RBP16.87■□□□□ 0.29
KRCC1-201ENST00000347055 ATP5A1P25705 553 aaKnown RBP16.87■□□□□ 0.29
KRCC1-201ENST00000347055 MAT2AP31153 395 aaKnown RBP16.87■□□□□ 0.29
KRCC1-201ENST00000347055 MAP2K6P52564 334 aa16.87■□□□□ 0.29
KRCC1-201ENST00000347055 FXYD6P3P58550 94 aa16.87■□□□□ 0.29
KRCC1-201ENST00000347055 EEF1A1P68104 462 aaKnown RBP16.87■□□□□ 0.29
KRCC1-201ENST00000347055 CAP1Q01518 475 aa16.87■□□□□ 0.29
KRCC1-201ENST00000347055 CDK5R1Q15078 307 aa16.87■□□□□ 0.29
KRCC1-201ENST00000347055 UAP1L1Q3KQV9 507 aa16.87■□□□□ 0.29
KRCC1-201ENST00000347055 UNQ9370/PRO34162Q6UXP9 181 aa16.87■□□□□ 0.29
KRCC1-201ENST00000347055 C2orf73Q8N5S3 287 aaPredicted RBP16.87■□□□□ 0.29
KRCC1-201ENST00000347055 ACOT4Q8N9L9 421 aa16.87■□□□□ 0.29
KRCC1-201ENST00000347055 C17orf47Q8NEP4 570 aa16.87■□□□□ 0.29
KRCC1-201ENST00000347055 SMPDL3BQ92485 455 aa16.87■□□□□ 0.29
KRCC1-201ENST00000347055 ZNF681Q96N22 645 aa16.87■□□□□ 0.29
KRCC1-201ENST00000347055 DDOQ99489 341 aa16.87■□□□□ 0.29
KRCC1-201ENST00000347055 PELOQ9BRX2 385 aaKnown RBP16.87■□□□□ 0.29
KRCC1-201ENST00000347055 AICDAQ9GZX7 198 aa16.87■□□□□ 0.29
KRCC1-201ENST00000347055 PRDM9Q9NQV7 894 aa16.87■□□□□ 0.29
KRCC1-201ENST00000347055 C14orf105Q9NVL8 296 aa16.87■□□□□ 0.29
KRCC1-201ENST00000347055 PIPOXQ9P0Z9 390 aa16.87■□□□□ 0.29
KRCC1-201ENST00000347055 ZNF780BQ9Y6R6 833 aa16.87■□□□□ 0.29
KRCC1-201ENST00000347055 LRRK1Q38SD2 2015 aa16.86■□□□□ 0.29
KRCC1-201ENST00000347055 A0A1B0GVC2 190 aa16.86■□□□□ 0.29
KRCC1-201ENST00000347055 A0A1B0GW55 424 aa16.86■□□□□ 0.29
KRCC1-201ENST00000347055 A6NIN4 97 aa16.86■□□□□ 0.29
KRCC1-201ENST00000347055 J3QLW9 94 aa16.86■□□□□ 0.29
KRCC1-201ENST00000347055 LCMT2O60294 686 aaKnown RBP16.86■□□□□ 0.29
KRCC1-201ENST00000347055 CREBL2O60519 120 aaPredicted RBP16.86■□□□□ 0.29
KRCC1-201ENST00000347055 GALR3O60755 368 aaPredicted RBP16.86■□□□□ 0.29
KRCC1-201ENST00000347055 KRT33AO76009 404 aa16.86■□□□□ 0.29
KRCC1-201ENST00000347055 IFNGP01579 166 aa16.86■□□□□ 0.29
KRCC1-201ENST00000347055 RAB40ALP0C0E4 278 aa16.86■□□□□ 0.29
KRCC1-201ENST00000347055 DUX4L2P0CJ85 424 aa16.86■□□□□ 0.29
KRCC1-201ENST00000347055 DUX4L3P0CJ86 424 aa16.86■□□□□ 0.29
KRCC1-201ENST00000347055 DUX4L4P0CJ87 422 aa16.86■□□□□ 0.29
KRCC1-201ENST00000347055 DUX4L5P0CJ88 424 aa16.86■□□□□ 0.29
KRCC1-201ENST00000347055 DUX4L6P0CJ89 424 aa16.86■□□□□ 0.29
KRCC1-201ENST00000347055 DUX4L7P0CJ90 424 aa16.86■□□□□ 0.29
KRCC1-201ENST00000347055 ZNF19P17023 458 aa16.86■□□□□ 0.29
KRCC1-201ENST00000347055 TEAD1P28347 426 aa16.86■□□□□ 0.29
KRCC1-201ENST00000347055 MC3RP41968 323 aa16.86■□□□□ 0.29
KRCC1-201ENST00000347055 ZNF136P52737 540 aa16.86■□□□□ 0.29
KRCC1-201ENST00000347055 ST8SIA6P61647 398 aa16.86■□□□□ 0.29
KRCC1-201ENST00000347055 GGTLC2Q14390 218 aa16.86■□□□□ 0.29
KRCC1-201ENST00000347055 ZNF626Q68DY1 528 aa16.86■□□□□ 0.29
KRCC1-201ENST00000347055 RPL22L1Q6P5R6 122 aaKnown RBP16.86■□□□□ 0.29
KRCC1-201ENST00000347055 ZNF836Q6ZNA1 936 aa16.86■□□□□ 0.29
KRCC1-201ENST00000347055 HMGN2P46Q86SG4 172 aa16.86■□□□□ 0.29
KRCC1-201ENST00000347055 SP7Q8TDD2 431 aaPredicted RBP16.86■□□□□ 0.29
KRCC1-201ENST00000347055 TMEM239Q8WW34 195 aa16.86■□□□□ 0.29
KRCC1-201ENST00000347055 RAB40AQ8WXH6 277 aa16.86■□□□□ 0.29
KRCC1-201ENST00000347055 AUTS2Q8WXX7 1259 aa16.86■□□□□ 0.29
KRCC1-201ENST00000347055 ST8SIA4Q92187 359 aa16.86■□□□□ 0.29
KRCC1-201ENST00000347055 NSMAFQ92636 917 aa16.86■□□□□ 0.29
KRCC1-201ENST00000347055 PTP4A1Q93096 173 aa16.86■□□□□ 0.29
KRCC1-201ENST00000347055 TBX5Q99593 518 aa16.86■□□□□ 0.29
KRCC1-201ENST00000347055 MGAT4CQ9UBM8 478 aa16.86■□□□□ 0.29
KRCC1-201ENST00000347055 DUX4Q9UBX2 424 aa16.86■□□□□ 0.29
KRCC1-201ENST00000347055 PPIEQ9UNP9 301 aaKnown RBP16.86■□□□□ 0.29
KRCC1-201ENST00000347055 TGM5O43548 720 aa16.85■□□□□ 0.29
KRCC1-201ENST00000347055 SYPP08247 313 aa16.85■□□□□ 0.29
KRCC1-201ENST00000347055 FGF2P09038 288 aa16.85■□□□□ 0.29
KRCC1-201ENST00000347055 CLTBP09497 229 aa16.85■□□□□ 0.29
KRCC1-201ENST00000347055 RPS4Y1P22090 263 aaKnown RBP16.85■□□□□ 0.29
KRCC1-201ENST00000347055 PDX1P52945 283 aa16.85■□□□□ 0.29
KRCC1-201ENST00000347055 ZNF273Q14593 569 aa16.85■□□□□ 0.29
KRCC1-201ENST00000347055 ZSWIM7Q19AV6 140 aa16.85■□□□□ 0.29
KRCC1-201ENST00000347055 LY6G5CQ5SRR4 150 aa16.85■□□□□ 0.29
KRCC1-201ENST00000347055 MFSD12Q6NUT3 480 aa16.85■□□□□ 0.29
KRCC1-201ENST00000347055 ARHGAP11AQ6P4F7 1023 aa16.85■□□□□ 0.29
KRCC1-201ENST00000347055 CHMP1BQ7LBR1 199 aa16.85■□□□□ 0.29
KRCC1-201ENST00000347055 NRROSQ86YC3 692 aa16.85■□□□□ 0.29
KRCC1-201ENST00000347055 BEST4Q8NFU0 473 aa16.85■□□□□ 0.29
KRCC1-201ENST00000347055 ZNF671Q8TAW3 534 aa16.85■□□□□ 0.29
KRCC1-201ENST00000347055 THAP4Q8WY91 577 aa16.85■□□□□ 0.29
KRCC1-201ENST00000347055 SGTBQ96EQ0 304 aa16.85■□□□□ 0.29
KRCC1-201ENST00000347055 ELMOD3Q96FG2 381 aa16.85■□□□□ 0.29
KRCC1-201ENST00000347055 OR6C2Q9NZP2 312 aa16.85■□□□□ 0.29
KRCC1-201ENST00000347055 CCL26Q9Y258 94 aa16.85■□□□□ 0.29
KRCC1-201ENST00000347055 ATG4BQ9Y4P1 393 aa16.85■□□□□ 0.29
KRCC1-201ENST00000347055 IRAK3Q9Y616 596 aa16.85■□□□□ 0.29
KRCC1-201ENST00000347055 MCRIP1C9JLW8 97 aa16.84■□□□□ 0.29
KRCC1-201ENST00000347055 TSPAN4O14817 238 aa16.84■□□□□ 0.29
KRCC1-201ENST00000347055 RP2O75695 350 aa16.84■□□□□ 0.29
KRCC1-201ENST00000347055 ZIC2O95409 532 aaPredicted RBP16.84■□□□□ 0.29
KRCC1-201ENST00000347055 DBIP07108 87 aaKnown RBP16.84■□□□□ 0.29
KRCC1-201ENST00000347055 NMBP08949 121 aa16.84■□□□□ 0.29
KRCC1-201ENST00000347055 SLC35G4P0C7Q5 338 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms