RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 LEF1Q9UJU2 399 aaPredicted RBP14.16□□□□□ -0.14
TSPAN4-201ENST00000346501 PRDM4Q9UKN5 801 aa14.16□□□□□ -0.14
TSPAN4-201ENST00000346501 PCDHB14Q9Y5E9 798 aa14.16□□□□□ -0.14
TSPAN4-201ENST00000346501 A0A0G2JPF8 293 aa14.15□□□□□ -0.14
TSPAN4-201ENST00000346501 A0A0J9YW62 118 aa14.15□□□□□ -0.14
TSPAN4-201ENST00000346501 A8MXE2 369 aa14.15□□□□□ -0.14
TSPAN4-201ENST00000346501 HNRNPCL2B2RXH8 293 aa14.15□□□□□ -0.14
TSPAN4-201ENST00000346501 HNRNPCL3B7ZW38 293 aa14.15□□□□□ -0.14
TSPAN4-201ENST00000346501 ANGPT2O15123 496 aa14.15□□□□□ -0.14
TSPAN4-201ENST00000346501 HNRNPCL1O60812 293 aaKnown RBP14.15□□□□□ -0.14
TSPAN4-201ENST00000346501 CHRM4P08173 479 aa14.15□□□□□ -0.14
TSPAN4-201ENST00000346501 VIMP08670 466 aaKnown RBP14.15□□□□□ -0.14
TSPAN4-201ENST00000346501 HNRNPCL4P0DMR1 293 aa14.15□□□□□ -0.14
TSPAN4-201ENST00000346501 TFPIP10646 304 aa14.15□□□□□ -0.14
TSPAN4-201ENST00000346501 NID1P14543 1247 aa14.15□□□□□ -0.14
TSPAN4-201ENST00000346501 DLX5P56178 289 aa14.15□□□□□ -0.14
TSPAN4-201ENST00000346501 SESN3P58005 492 aa14.15□□□□□ -0.14
TSPAN4-201ENST00000346501 COPZ1P61923 177 aa14.15□□□□□ -0.14
TSPAN4-201ENST00000346501 FUT5Q11128 374 aa14.15□□□□□ -0.14
TSPAN4-201ENST00000346501 RNPS1Q15287 305 aaKnown RBP14.15□□□□□ -0.14
TSPAN4-201ENST00000346501 RGNQ15493 299 aa14.15□□□□□ -0.14
TSPAN4-201ENST00000346501 TOMM34Q15785 309 aaPredicted RBP14.15□□□□□ -0.14
TSPAN4-201ENST00000346501 MAPK14Q16539 360 aa14.15□□□□□ -0.14
TSPAN4-201ENST00000346501 GRINAQ7Z429 371 aa14.15□□□□□ -0.14
TSPAN4-201ENST00000346501 ZZZ3Q8IYH5 903 aa14.15□□□□□ -0.14
TSPAN4-201ENST00000346501 SLC43A2Q8N370 569 aa14.15□□□□□ -0.14
TSPAN4-201ENST00000346501 ZHX1-C8orf76Q96EF9 292 aa14.15□□□□□ -0.14
TSPAN4-201ENST00000346501 AURKBQ96GD4 344 aaPredicted RBP14.15□□□□□ -0.14
TSPAN4-201ENST00000346501 ADGRG7Q96K78 797 aa14.15□□□□□ -0.14
TSPAN4-201ENST00000346501 LURAP1Q96LR2 239 aa14.15□□□□□ -0.14
TSPAN4-201ENST00000346501 TACO1Q9BSH4 297 aaKnown RBP14.15□□□□□ -0.14
TSPAN4-201ENST00000346501 PAIP1Q9H074 479 aaKnown RBP14.15□□□□□ -0.14
TSPAN4-201ENST00000346501 ELOVL5Q9NYP7 299 aa14.15□□□□□ -0.14
TSPAN4-201ENST00000346501 IFT52Q9Y366 437 aa14.15□□□□□ -0.14
TSPAN4-201ENST00000346501 A0A1W2PP18 115 aa14.14□□□□□ -0.15
TSPAN4-201ENST00000346501 ATP8B1O43520 1251 aa14.14□□□□□ -0.15
TSPAN4-201ENST00000346501 TNFSF13O75888 250 aa14.14□□□□□ -0.15
TSPAN4-201ENST00000346501 CD8BP10966 210 aa14.14□□□□□ -0.15
TSPAN4-201ENST00000346501 CSNK2A1P68400 391 aaPredicted RBP14.14□□□□□ -0.15
TSPAN4-201ENST00000346501 CTU2Q2VPK5 515 aaKnown RBP14.14□□□□□ -0.15
TSPAN4-201ENST00000346501 GTDC1Q4AE62 458 aa14.14□□□□□ -0.15
TSPAN4-201ENST00000346501 TMEM201Q5SNT2 666 aa14.14□□□□□ -0.15
TSPAN4-201ENST00000346501 PRAMEF8Q5VWM4 474 aa14.14□□□□□ -0.15
TSPAN4-201ENST00000346501 PRAMEF7Q5VXH5 474 aa14.14□□□□□ -0.15
TSPAN4-201ENST00000346501 KRT73Q86Y46 540 aa14.14□□□□□ -0.15
TSPAN4-201ENST00000346501 FAM71CQ8NEG0 241 aa14.14□□□□□ -0.15
TSPAN4-201ENST00000346501 OR6K3Q8NGY3 331 aa14.14□□□□□ -0.15
TSPAN4-201ENST00000346501 OR52P1PQ8NH57 321 aa14.14□□□□□ -0.15
TSPAN4-201ENST00000346501 TSPEARQ8WU66 669 aa14.14□□□□□ -0.15
TSPAN4-201ENST00000346501 STARD4Q96DR4 205 aa14.14□□□□□ -0.15
TSPAN4-201ENST00000346501 OR5B2Q96R09 309 aa14.14□□□□□ -0.15
TSPAN4-201ENST00000346501 NPAS1Q99742 590 aa14.14□□□□□ -0.15
TSPAN4-201ENST00000346501 QRSL1Q9H0R6 528 aaKnown RBP14.14□□□□□ -0.15
TSPAN4-201ENST00000346501 SLC6A13Q9NSD5 602 aa14.14□□□□□ -0.15
TSPAN4-201ENST00000346501 GALNT8Q9NY28 637 aa14.14□□□□□ -0.15
TSPAN4-201ENST00000346501 NDUFAF1Q9Y375 327 aa14.14□□□□□ -0.15
TSPAN4-201ENST00000346501 CENPVL1A0A0U1RR11 272 aa14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 CFAP73A6NFT4 308 aa14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 ENO4A6NNW6 628 aa14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 ETV2O00321 342 aaPredicted RBP14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 DNAJA2O60884 412 aa14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 AQP8O94778 261 aa14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 GOSR1O95249 250 aa14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 TFPTP0C1Z6 253 aa14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 EPXP11678 715 aa14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 POU2F1P14859 743 aa14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 KIR2DL2P43627 348 aaPredicted RBP14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 IDH2P48735 452 aaKnown RBP14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 ARFIP2P53365 341 aa14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 RAC3P60763 192 aa14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 ZNF239Q16600 458 aaKnown RBP14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 LRIF1Q5T3J3 769 aa14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 GCNT6Q5T4J0 391 aa14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 MRPL2Q5T653 305 aaKnown RBP14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 VWA1Q6PCB0 445 aa14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 PLEKHM3Q6ZWE6 761 aa14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 ZNF550Q7Z398 422 aa14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 BTLAQ7Z6A9 289 aa14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 HMGN2P46Q86SG4 172 aa14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 MED12LQ86YW9 2145 aa14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 FUNDC1Q8IVP5 155 aa14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 BBS10Q8TAM1 723 aa14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 SLC38A5Q8WUX1 472 aa14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 ZG16BQ96DA0 208 aa14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 TMEM19Q96HH6 336 aa14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 SPATA5L1Q9BVQ7 753 aa14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 GP6Q9HCN6 339 aa14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 ZNF446Q9NWS9 450 aa14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 CRIM1Q9NZV1 1036 aa14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 CHRNA9Q9UGM1 479 aa14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 KIAA1549Q9HCM3 1950 aa14.13□□□□□ -0.15
TSPAN4-201ENST00000346501 PRAMEF27A3QJZ7 478 aa14.12□□□□□ -0.15
TSPAN4-201ENST00000346501 SULT2B1O00204 365 aa14.12□□□□□ -0.15
TSPAN4-201ENST00000346501 SS18L1O75177 396 aaPredicted RBP14.12□□□□□ -0.15
TSPAN4-201ENST00000346501 PRKD3O94806 890 aa14.12□□□□□ -0.15
TSPAN4-201ENST00000346501 NTN1O95631 604 aa14.12□□□□□ -0.15
TSPAN4-201ENST00000346501 THBS1P07996 1170 aa14.12□□□□□ -0.15
TSPAN4-201ENST00000346501 IL11P20809 199 aa14.12□□□□□ -0.15
TSPAN4-201ENST00000346501 ENPP1P22413 925 aa14.12□□□□□ -0.15
TSPAN4-201ENST00000346501 CD79BP40259 229 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms