RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 AGAP5A6NIR3 686 aa12.52□□□□□ -0.41
TPM4-202ENST00000344824 FAM90A27PA6NNH2 459 aa12.52□□□□□ -0.41
TPM4-202ENST00000344824 ADAM10O14672 748 aa12.52□□□□□ -0.41
TPM4-202ENST00000344824 GMFGO60234 142 aa12.52□□□□□ -0.41
TPM4-202ENST00000344824 UGT2B17O75795 530 aa12.52□□□□□ -0.41
TPM4-202ENST00000344824 GPIP06744 558 aa12.52□□□□□ -0.41
TPM4-202ENST00000344824 DBIP07108 87 aaKnown RBP12.52□□□□□ -0.41
TPM4-202ENST00000344824 HPGDP15428 266 aa12.52□□□□□ -0.41
TPM4-202ENST00000344824 ACVR2AP27037 513 aa12.52□□□□□ -0.41
TPM4-202ENST00000344824 GCKP35557 465 aa12.52□□□□□ -0.41
TPM4-202ENST00000344824 OR1E2P47887 323 aa12.52□□□□□ -0.41
TPM4-202ENST00000344824 ATP12AP54707 1039 aa12.52□□□□□ -0.41
TPM4-202ENST00000344824 NUP107P57740 925 aa12.52□□□□□ -0.41
TPM4-202ENST00000344824 SELENOWP63302 87 aa12.52□□□□□ -0.41
TPM4-202ENST00000344824 CHRNB3Q05901 458 aa12.52□□□□□ -0.41
TPM4-202ENST00000344824 LARS2Q15031 903 aaKnown RBP12.52□□□□□ -0.41
TPM4-202ENST00000344824 DUSP7Q16829 419 aa12.52□□□□□ -0.41
TPM4-202ENST00000344824 TMEM211Q6ICI0 200 aa12.52□□□□□ -0.41
TPM4-202ENST00000344824 TMEM81Q6P7N7 255 aa12.52□□□□□ -0.41
TPM4-202ENST00000344824 ZNF836Q6ZNA1 936 aa12.52□□□□□ -0.41
TPM4-202ENST00000344824 MARVELD2Q8N4S9 558 aa12.52□□□□□ -0.41
TPM4-202ENST00000344824 OR4C3Q8NH37 302 aa12.52□□□□□ -0.41
TPM4-202ENST00000344824 VANGL1Q8TAA9 524 aaPredicted RBP12.52□□□□□ -0.41
TPM4-202ENST00000344824 CA5BP1Q8WTZ4 195 aa12.52□□□□□ -0.41
TPM4-202ENST00000344824 PHF10Q8WUB8 498 aaKnown RBP12.52□□□□□ -0.41
TPM4-202ENST00000344824 PROX1Q92786 737 aa12.52□□□□□ -0.41
TPM4-202ENST00000344824 SLCO4A1Q96BD0 722 aa12.52□□□□□ -0.41
TPM4-202ENST00000344824 PINK1Q9BXM7 581 aa12.52□□□□□ -0.41
TPM4-202ENST00000344824 RSPO3Q9BXY4 272 aaPredicted RBP12.52□□□□□ -0.41
TPM4-202ENST00000344824 UBQLN3Q9H347 655 aa12.52□□□□□ -0.41
TPM4-202ENST00000344824 S100A14Q9HCY8 104 aa12.52□□□□□ -0.41
TPM4-202ENST00000344824 ACKR4Q9NPB9 350 aa12.52□□□□□ -0.41
TPM4-202ENST00000344824 SLC13A4Q9UKG4 626 aa12.52□□□□□ -0.41
TPM4-202ENST00000344824 ZNF232Q9UNY5 417 aa12.52□□□□□ -0.41
TPM4-202ENST00000344824 IFT52Q9Y366 437 aa12.52□□□□□ -0.41
TPM4-202ENST00000344824 SH3GLB1Q9Y371 365 aa12.52□□□□□ -0.41
TPM4-202ENST00000344824 TMEM229AB2RXF0 380 aa12.51□□□□□ -0.41
TPM4-202ENST00000344824 hCG_2039718K7EN88 272 aa12.51□□□□□ -0.41
TPM4-202ENST00000344824 M0R3H8 397 aa12.51□□□□□ -0.41
TPM4-202ENST00000344824 FRS3O43559 492 aa12.51□□□□□ -0.41
TPM4-202ENST00000344824 FKBP6O75344 327 aa12.51□□□□□ -0.41
TPM4-202ENST00000344824 TIPRLO75663 272 aa12.51□□□□□ -0.41
TPM4-202ENST00000344824 CLDN14O95500 239 aa12.51□□□□□ -0.41
TPM4-202ENST00000344824 OXSR1O95747 527 aaPredicted RBP12.51□□□□□ -0.41
TPM4-202ENST00000344824 BAG2O95816 211 aa12.51□□□□□ -0.41
TPM4-202ENST00000344824 HPNP05981 417 aa12.51□□□□□ -0.41
TPM4-202ENST00000344824 FESP07332 822 aa12.51□□□□□ -0.41
TPM4-202ENST00000344824 UMPSP11172 480 aa12.51□□□□□ -0.41
TPM4-202ENST00000344824 RPS4Y1P22090 263 aaKnown RBP12.51□□□□□ -0.41
TPM4-202ENST00000344824 GRNP28799 593 aaKnown RBP12.51□□□□□ -0.41
TPM4-202ENST00000344824 SLC7A1P30825 629 aa12.51□□□□□ -0.41
TPM4-202ENST00000344824 KCNJ5P48544 419 aa12.51□□□□□ -0.41
TPM4-202ENST00000344824 CLK3P49761 638 aaKnown RBP12.51□□□□□ -0.41
TPM4-202ENST00000344824 PMPCAQ10713 525 aa12.51□□□□□ -0.41
TPM4-202ENST00000344824 RCN1Q15293 331 aa12.51□□□□□ -0.41
TPM4-202ENST00000344824 LIN52Q52LA3 116 aa12.51□□□□□ -0.41
TPM4-202ENST00000344824 IFI44LQ53G44 452 aa12.51□□□□□ -0.41
TPM4-202ENST00000344824 C1orf185Q5T7R7 199 aa12.51□□□□□ -0.41
TPM4-202ENST00000344824 XKRXQ6PP77 449 aa12.51□□□□□ -0.41
TPM4-202ENST00000344824 B3GNT6Q6ZMB0 384 aa12.51□□□□□ -0.41
TPM4-202ENST00000344824 COMTD1Q86VU5 262 aa12.51□□□□□ -0.41
TPM4-202ENST00000344824 PLCZ1Q86YW0 608 aa12.51□□□□□ -0.41
TPM4-202ENST00000344824 C10orf67Q8IYJ2 551 aa12.51□□□□□ -0.41
TPM4-202ENST00000344824 RASSF5Q8WWW0 418 aa12.51□□□□□ -0.41
TPM4-202ENST00000344824 RND1Q92730 232 aa12.51□□□□□ -0.41
TPM4-202ENST00000344824 TBL1XR1Q9BZK7 514 aa12.51□□□□□ -0.41
TPM4-202ENST00000344824 RLIMQ9NVW2 624 aa12.51□□□□□ -0.41
TPM4-202ENST00000344824 FBXL2Q9UKC9 423 aa12.51□□□□□ -0.41
TPM4-202ENST00000344824 BAG5Q9UL15 447 aa12.51□□□□□ -0.41
TPM4-202ENST00000344824 RPH3AQ9Y2J0 694 aaPredicted RBP12.51□□□□□ -0.41
TPM4-202ENST00000344824 AP4S1Q9Y587 144 aa12.51□□□□□ -0.41
TPM4-202ENST00000344824 HCFC1P51610 2035 aa12.5□□□□□ -0.41
TPM4-202ENST00000344824 SCDO00767 359 aa12.5□□□□□ -0.41
TPM4-202ENST00000344824 WDR1O75083 606 aa12.5□□□□□ -0.41
TPM4-202ENST00000344824 CBR3O75828 277 aa12.5□□□□□ -0.41
TPM4-202ENST00000344824 CYP7B1O75881 506 aa12.5□□□□□ -0.41
TPM4-202ENST00000344824 KCNJ10P78508 379 aa12.5□□□□□ -0.41
TPM4-202ENST00000344824 CRYZQ08257 329 aaKnown RBP12.5□□□□□ -0.41
TPM4-202ENST00000344824 CDSNQ15517 529 aa12.5□□□□□ -0.41
TPM4-202ENST00000344824 NDUFAF6Q330K2 333 aa12.5□□□□□ -0.41
TPM4-202ENST00000344824 MRPL2Q5T653 305 aaKnown RBP12.5□□□□□ -0.41
TPM4-202ENST00000344824 ZFP1Q6P2D0 407 aa12.5□□□□□ -0.41
TPM4-202ENST00000344824 MARCH3Q86UD3 253 aa12.5□□□□□ -0.41
TPM4-202ENST00000344824 CARM1Q86X55 608 aa12.5□□□□□ -0.41
TPM4-202ENST00000344824 CCDC71Q8IV32 467 aaPredicted RBP12.5□□□□□ -0.41
TPM4-202ENST00000344824 CLIP4Q8N3C7 705 aa12.5□□□□□ -0.41
TPM4-202ENST00000344824 WDSUB1Q8N9V3 476 aa12.5□□□□□ -0.41
TPM4-202ENST00000344824 ZNF527Q8NB42 609 aa12.5□□□□□ -0.41
TPM4-202ENST00000344824 GEMIN6Q8WXD5 167 aaKnown RBP12.5□□□□□ -0.41
TPM4-202ENST00000344824 ARSGQ96EG1 525 aa12.5□□□□□ -0.41
TPM4-202ENST00000344824 DTNBP1Q96EV8 351 aa12.5□□□□□ -0.41
TPM4-202ENST00000344824 CHID1Q9BWS9 393 aa12.5□□□□□ -0.41
TPM4-202ENST00000344824 DSN1Q9H410 356 aa12.5□□□□□ -0.41
TPM4-202ENST00000344824 UBQLN4Q9NRR5 601 aa12.5□□□□□ -0.41
TPM4-202ENST00000344824 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.5□□□□□ -0.41
TPM4-202ENST00000344824 CCM2LQ9NUG4 571 aaPredicted RBP12.5□□□□□ -0.41
TPM4-202ENST00000344824 RNF6Q9Y252 685 aa12.5□□□□□ -0.41
TPM4-202ENST00000344824 FAM215AQ9Y5M1 114 aa12.5□□□□□ -0.41
TPM4-202ENST00000344824 NPIPB9F8W1W9 429 aa12.49□□□□□ -0.41
TPM4-202ENST00000344824 H3BNX3 289 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms