RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 ROBO4Q8WZ75 1007 aa12.9□□□□□ -0.34
HMGN3-202ENST00000344726 VPS33AQ96AX1 596 aa12.9□□□□□ -0.34
HMGN3-202ENST00000344726 MRGPRX4Q96LA9 322 aa12.9□□□□□ -0.34
HMGN3-202ENST00000344726 DACH2Q96NX9 599 aa12.9□□□□□ -0.34
HMGN3-202ENST00000344726 FOXC2Q99958 501 aa12.9□□□□□ -0.34
HMGN3-202ENST00000344726 EBF4Q9BQW3 602 aa12.9□□□□□ -0.34
HMGN3-202ENST00000344726 PRRG4Q9BZD6 226 aa12.9□□□□□ -0.34
HMGN3-202ENST00000344726 SLC38A1Q9H2H9 487 aa12.9□□□□□ -0.34
HMGN3-202ENST00000344726 POLE3Q9NRF9 147 aa12.9□□□□□ -0.34
HMGN3-202ENST00000344726 PAQR5Q9NXK6 330 aaPredicted RBP12.9□□□□□ -0.34
HMGN3-202ENST00000344726 MCTS1Q9ULC4 181 aaKnown RBP12.9□□□□□ -0.34
HMGN3-202ENST00000344726 TESMINQ9Y4I5 508 aa12.9□□□□□ -0.34
HMGN3-202ENST00000344726 RFXANKO14593 260 aa12.89□□□□□ -0.35
HMGN3-202ENST00000344726 SS18L1O75177 396 aaPredicted RBP12.89□□□□□ -0.35
HMGN3-202ENST00000344726 SYNGR4O95473 234 aa12.89□□□□□ -0.35
HMGN3-202ENST00000344726 CD79BP40259 229 aa12.89□□□□□ -0.35
HMGN3-202ENST00000344726 IDH3AP50213 366 aa12.89□□□□□ -0.35
HMGN3-202ENST00000344726 POLR2JP52435 117 aaKnown RBP12.89□□□□□ -0.35
HMGN3-202ENST00000344726 CARD18P57730 90 aa12.89□□□□□ -0.35
HMGN3-202ENST00000344726 LRRC74AQ0VAA2 488 aa12.89□□□□□ -0.35
HMGN3-202ENST00000344726 ZNF239Q16600 458 aaKnown RBP12.89□□□□□ -0.35
HMGN3-202ENST00000344726 TIGD2Q4W5G0 525 aa12.89□□□□□ -0.35
HMGN3-202ENST00000344726 EIF3MQ7L2H7 374 aaKnown RBP12.89□□□□□ -0.35
HMGN3-202ENST00000344726 HDXQ7Z353 690 aa12.89□□□□□ -0.35
HMGN3-202ENST00000344726 AURKBQ96GD4 344 aaPredicted RBP12.89□□□□□ -0.35
HMGN3-202ENST00000344726 GMPPAQ96IJ6 420 aaPredicted RBP12.89□□□□□ -0.35
HMGN3-202ENST00000344726 TRNT1Q96Q11 434 aaKnown RBP12.89□□□□□ -0.35
HMGN3-202ENST00000344726 PROCRQ9UNN8 238 aa12.89□□□□□ -0.35
HMGN3-202ENST00000344726 A0A1W2PNR3 127 aa12.88□□□□□ -0.35
HMGN3-202ENST00000344726 SASH3O75995 380 aa12.88□□□□□ -0.35
HMGN3-202ENST00000344726 ATE1O95260 518 aa12.88□□□□□ -0.35
HMGN3-202ENST00000344726 CD1EP15812 388 aa12.88□□□□□ -0.35
HMGN3-202ENST00000344726 PCYT1AP49585 367 aa12.88□□□□□ -0.35
HMGN3-202ENST00000344726 SESN3P58005 492 aa12.88□□□□□ -0.35
HMGN3-202ENST00000344726 SELENBP1Q13228 472 aa12.88□□□□□ -0.35
HMGN3-202ENST00000344726 PDSS1Q5T2R2 415 aa12.88□□□□□ -0.35
HMGN3-202ENST00000344726 FUNDC1Q8IVP5 155 aa12.88□□□□□ -0.35
HMGN3-202ENST00000344726 MIER2Q8N344 545 aa12.88□□□□□ -0.35
HMGN3-202ENST00000344726 OR6K3Q8NGY3 331 aa12.88□□□□□ -0.35
HMGN3-202ENST00000344726 RNF128Q8TEB7 428 aa12.88□□□□□ -0.35
HMGN3-202ENST00000344726 ABHD3Q8WU67 409 aa12.88□□□□□ -0.35
HMGN3-202ENST00000344726 OIT3Q8WWZ8 545 aa12.88□□□□□ -0.35
HMGN3-202ENST00000344726 ST8SIA1Q92185 356 aa12.88□□□□□ -0.35
HMGN3-202ENST00000344726 WFIKKN1Q96NZ8 548 aa12.88□□□□□ -0.35
HMGN3-202ENST00000344726 TCF7L2Q9NQB0 619 aa12.88□□□□□ -0.35
HMGN3-202ENST00000344726 PLSCR4Q9NRQ2 329 aa12.88□□□□□ -0.35
HMGN3-202ENST00000344726 KLHL28Q9NXS3 571 aa12.88□□□□□ -0.35
HMGN3-202ENST00000344726 C6orf203Q9P0P8 240 aaPredicted RBP12.88□□□□□ -0.35
HMGN3-202ENST00000344726 SLC35A3Q9Y2D2 325 aa12.88□□□□□ -0.35
HMGN3-202ENST00000344726 NF1P21359 2839 aa12.87□□□□□ -0.35
HMGN3-202ENST00000344726 IGHV3-15A0A0B4J1V0 119 aa12.87□□□□□ -0.35
HMGN3-202ENST00000344726 FAM234BA2RU67 622 aa12.87□□□□□ -0.35
HMGN3-202ENST00000344726 AGAP5A6NIR3 686 aa12.87□□□□□ -0.35
HMGN3-202ENST00000344726 DEFB108AA8MXU0 73 aa12.87□□□□□ -0.35
HMGN3-202ENST00000344726 HMGB1P1B2RPK0 211 aaPredicted RBP12.87□□□□□ -0.35
HMGN3-202ENST00000344726 TGDSO95455 350 aa12.87□□□□□ -0.35
HMGN3-202ENST00000344726 PLGP00747 810 aaPredicted RBP12.87□□□□□ -0.35
HMGN3-202ENST00000344726 ZCCHC18P0CG32 403 aa12.87□□□□□ -0.35
HMGN3-202ENST00000344726 ETFAP13804 333 aa12.87□□□□□ -0.35
HMGN3-202ENST00000344726 POU2F1P14859 743 aa12.87□□□□□ -0.35
HMGN3-202ENST00000344726 HOXB9P17482 250 aaPredicted RBP12.87□□□□□ -0.35
HMGN3-202ENST00000344726 PGCP20142 388 aa12.87□□□□□ -0.35
HMGN3-202ENST00000344726 KLK2P20151 261 aa12.87□□□□□ -0.35
HMGN3-202ENST00000344726 RPS4Y1P22090 263 aaKnown RBP12.87□□□□□ -0.35
HMGN3-202ENST00000344726 AGTR1P30556 359 aa12.87□□□□□ -0.35
HMGN3-202ENST00000344726 UGT2B10P36537 528 aa12.87□□□□□ -0.35
HMGN3-202ENST00000344726 MRPL19P49406 292 aaKnown RBP12.87□□□□□ -0.35
HMGN3-202ENST00000344726 PPP2R2AP63151 447 aa12.87□□□□□ -0.35
HMGN3-202ENST00000344726 KCNJ10P78508 379 aa12.87□□□□□ -0.35
HMGN3-202ENST00000344726 HPCAP84074 193 aa12.87□□□□□ -0.35
HMGN3-202ENST00000344726 LRRC74BQ6ZQY2 392 aa12.87□□□□□ -0.35
HMGN3-202ENST00000344726 MSANTD1Q6ZTZ1 278 aa12.87□□□□□ -0.35
HMGN3-202ENST00000344726 PLEKHM3Q6ZWE6 761 aa12.87□□□□□ -0.35
HMGN3-202ENST00000344726 ZNF550Q7Z398 422 aa12.87□□□□□ -0.35
HMGN3-202ENST00000344726 CNOT9Q92600 299 aaKnown RBP12.87□□□□□ -0.35
HMGN3-202ENST00000344726 GTF2H4Q92759 462 aa12.87□□□□□ -0.35
HMGN3-202ENST00000344726 CPNE4Q96A23 557 aaPredicted RBP12.87□□□□□ -0.35
HMGN3-202ENST00000344726 VIPAS39Q9H9C1 493 aa12.87□□□□□ -0.35
HMGN3-202ENST00000344726 TPT1P8Q9HAU6 139 aa12.87□□□□□ -0.35
HMGN3-202ENST00000344726 ACER3Q9NUN7 267 aa12.87□□□□□ -0.35
HMGN3-202ENST00000344726 ELOVL5Q9NYP7 299 aa12.87□□□□□ -0.35
HMGN3-202ENST00000344726 LIPT1Q9Y234 373 aa12.87□□□□□ -0.35
HMGN3-202ENST00000344726 EMC9Q9Y3B6 208 aa12.87□□□□□ -0.35
HMGN3-202ENST00000344726 SETD2Q9BYW2 2564 aaPredicted RBP12.86□□□□□ -0.35
HMGN3-202ENST00000344726 ACANP16112 2415 aa12.86□□□□□ -0.35
HMGN3-202ENST00000344726 GJE1A6NN92 205 aa12.86□□□□□ -0.35
HMGN3-202ENST00000344726 AP3D1O14617 1153 aa12.86□□□□□ -0.35
HMGN3-202ENST00000344726 POLR3GO15318 223 aaPredicted RBP12.86□□□□□ -0.35
HMGN3-202ENST00000344726 KRT75O95678 551 aa12.86□□□□□ -0.35
HMGN3-202ENST00000344726 ENPP1P22413 925 aa12.86□□□□□ -0.35
HMGN3-202ENST00000344726 RYKP34925 604 aa12.86□□□□□ -0.35
HMGN3-202ENST00000344726 KCNJ5P48544 419 aa12.86□□□□□ -0.35
HMGN3-202ENST00000344726 AQP5P55064 265 aa12.86□□□□□ -0.35
HMGN3-202ENST00000344726 CTBP2P56545 445 aa12.86□□□□□ -0.35
HMGN3-202ENST00000344726 TXNL4AP83876 142 aaKnown RBP12.86□□□□□ -0.35
HMGN3-202ENST00000344726 MERTKQ12866 999 aa12.86□□□□□ -0.35
HMGN3-202ENST00000344726 EXOC3L2Q2M3D2 409 aa12.86□□□□□ -0.35
HMGN3-202ENST00000344726 FBXW10Q5XX13 1052 aa12.86□□□□□ -0.35
HMGN3-202ENST00000344726 C3orf33Q6P1S2 294 aa12.86□□□□□ -0.35
HMGN3-202ENST00000344726 SLC2A7Q6PXP3 512 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms