RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 TP53INP1Q96A56 240 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 SENP5Q96HI0 755 aaPredicted RBP13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 DMRTB1Q96MA1 342 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 TEAD3Q99594 435 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 TMEM5Q9Y2B1 443 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 LRP4O75096 1905 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 LRRN3E7EW58 273 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 J3QLW9 94 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 FMO6PO60774 539 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 RGS9O75916 674 aaPredicted RBP13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 ZNF19P17023 458 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 MAOAP21397 527 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 GXYLT1Q4G148 440 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 MANEAQ5SRI9 462 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 IDNKQ5T6J7 187 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 ZNF613Q6PF04 617 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 IL20RBQ6UXL0 311 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 GLCCI1Q86VQ1 547 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 Q8N402 240 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 TPSD1Q9BZJ3 242 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 LRRN3Q9H3W5 708 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 DDX28Q9NUL7 540 aaKnown RBP13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 DNAJB12Q9NXW2 375 aaKnown RBP13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 CLCA3PQ9Y6N3 262 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 CCDC182A6NF36 153 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 OR5K4A6NMS3 321 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 FAM25AB3EWG3 89 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 FAM25CB3EWG5 89 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 FAM25GB3EWG6 89 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 CHP2O43745 196 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 HCN1O60741 890 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 SLC2A2P11168 524 aaPredicted RBP13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 S1PR1P21453 382 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 DRD5P21918 477 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 HCCSP53701 268 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 E2F1Q01094 437 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 ASAH1Q13510 395 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 ATAD3CQ5T2N8 411 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 TRIQKQ629K1 86 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 NR2C2APQ86WQ0 139 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 OR5W2Q8NH69 310 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 C4orf36Q96KX1 117 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 MAP3K3Q99759 626 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 LRRC61Q9BV99 259 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 PPIL3Q9H2H8 161 aaKnown RBP13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 FN3KQ9H479 309 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 NEK6Q9HC98 313 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 C14orf105Q9NVL8 296 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 ZNF221Q9UK13 617 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 MEIOCA2RUB1 952 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 MAGEB4O15481 346 aaPredicted RBP13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 ZNF3P17036 446 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 RCVRNP35243 200 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 ACVR1BP36896 505 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 ACAA2P42765 397 aaKnown RBP13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 ACSM1Q08AH1 577 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 NPSR1Q6W5P4 371 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 ARL14Q8N4G2 192 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 SMRP1Q8NCR6 262 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 SDR9C7Q8NEX9 313 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 B3GAT2Q9NPZ5 323 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 TRIM36Q9NQ86 728 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 ASB6Q9NWX5 421 aa13.73□□□□□ -0.21
VIPAS39-202ENST00000343765 SLC22A31A6NKX4 558 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 PLA2G10O15496 165 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 OR12D2P58182 307 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 GALEQ14376 348 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 ZNF362Q5T0B9 420 aaPredicted RBP13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 KIRREL2Q6UWL6 708 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 RFLNBQ8N5W9 214 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 RCBTB1Q8NDN9 531 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 OR6F1Q8NGZ6 308 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 RNF31Q96EP0 1072 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 ERMAPQ96PL5 475 aaPredicted RBP13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 SLC35A3Q9Y2D2 325 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 GRIP1Q9Y3R0 1128 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 A0A1B0GVC2 190 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 A6NIN4 97 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 SHISA7A6NL88 538 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 SERPINI2O75830 405 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 RNH1P13489 461 aaKnown RBP13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 SHC1P29353 583 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 CTBP2P56545 445 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 RPL13AP3Q6NVV1 102 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 LRRC17Q8N6Y2 441 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 GATSQ8NAP1 163 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 FAM98AQ8NCA5 519 aaKnown RBP13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 GALNT6Q8NCL4 622 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 C19orf18Q8NEA5 215 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 C17orf47Q8NEP4 570 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 OR4K13Q8NH42 304 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 ENKURQ8TC29 256 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 UBASH3BQ8TF42 649 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 SMPDL3BQ92485 455 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 ZMYND19Q96E35 227 aaPredicted RBP13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 COQ7Q99807 217 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 NDC1Q9BTX1 674 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 MCCC2Q9HCC0 563 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 LRIT1Q9P2V4 623 aa13.72□□□□□ -0.21
VIPAS39-202ENST00000343765 RPS6KB2Q9UBS0 482 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms