RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 BLKP51451 505 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 HYAL2Q12891 473 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 GPR176Q14439 515 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 DEFB132Q7Z7B7 95 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 ADGRG3Q86Y34 549 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 KREMEN2Q8NCW0 462 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 OR5K2Q8NHB8 316 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 ZNF480Q8WV37 535 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 KLHL15Q96M94 604 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 C5AR2Q9P296 337 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 WASH3PC4AMC7 463 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 MEN1O00255 615 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 SOD1P00441 154 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 FGF9P31371 208 aaPredicted RBP4.48□□□□□ -1.69
CSMD3-203ENST00000343508 RAB28P51157 221 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 FXYD6P3P58550 94 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 RPS21P63220 83 aaKnown RBP4.48□□□□□ -1.69
CSMD3-203ENST00000343508 PDE7AQ13946 482 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 SIAH3Q8IW03 269 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 OR4E2Q8NGC2 313 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 ABHD4Q8TB40 342 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 C12orf10Q9HB07 376 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 PDFQ9HBH1 243 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 I6L893 689 aaPredicted RBP4.48□□□□□ -1.69
CSMD3-203ENST00000343508 SYT5O00445 386 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 SGSHP51688 502 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 CAMK2DQ13557 499 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 RAB11BQ15907 218 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 PRAMEF8Q5VWM4 474 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 PRAMEF7Q5VXH5 474 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 ZNF704Q6ZNC4 412 aaPredicted RBP4.48□□□□□ -1.69
CSMD3-203ENST00000343508 NLRC3Q7RTR2 1065 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 KANSL1Q7Z3B3 1105 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 C12orf40Q86WS4 652 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 SERPINA12Q8IW75 414 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 ST8SIA4Q92187 359 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 MAP6Q96JE9 813 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 ATF6BQ99941 703 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 MOKQ9UQ07 419 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 ZNF337Q9Y3M9 751 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 MCM3APO60318 1980 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 FADS1O60427 444 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 CD1EP15812 388 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 GATMP50440 423 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 CCR9P51686 369 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 PLPP4Q5VZY2 271 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 UQCC3Q6UW78 93 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 ACOT4Q8N9L9 421 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 DUSP18Q8NEJ0 188 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 ASB17Q8WXJ9 295 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 ZNF578Q96N58 590 aaPredicted RBP4.48□□□□□ -1.69
CSMD3-203ENST00000343508 OPALINQ96PE5 141 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 CHST8Q9H2A9 424 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 WASH6PQ9NQA3 447 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 PRODH2Q9UF12 536 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 MEIS3P2A8K0S8 358 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 RTCAO00442 366 aaKnown RBP4.48□□□□□ -1.69
CSMD3-203ENST00000343508 ONECUT3O60422 494 aaPredicted RBP4.48□□□□□ -1.69
CSMD3-203ENST00000343508 RDH16O75452 317 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 CNMDO75829 334 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 PMS2P2O95744 297 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 PTNP21246 168 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 SIRPAP78324 504 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 ARL6IP1Q15041 203 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.48□□□□□ -1.69
CSMD3-203ENST00000343508 PYCR3Q53H96 274 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 AVL9Q8NBF6 648 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 TMEM234Q8WY98 164 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 MARC2Q969Z3 335 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 FAM46BQ96A09 425 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 ZNF649Q9BS31 505 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 FGF20Q9NP95 211 aaPredicted RBP4.48□□□□□ -1.69
CSMD3-203ENST00000343508 OR2S2Q9NQN1 319 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 SDHAF3Q9NRP4 125 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 SERINC1Q9NRX5 453 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 VNN3Q9NY84 501 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 GJD2Q9UKL4 321 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 PPT2Q9UMR5 302 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 TNFRSF10BO14763 440 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 SHOXO15266 292 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 SHC1P29353 583 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 GLO1Q04760 184 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 MGAT3Q09327 533 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 GFOD2Q3B7J2 385 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 AVPI1Q5T686 147 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 GHSRQ92847 366 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 OR7D2Q96RA2 312 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 CYB5R1Q9UHQ9 305 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 NRXN2Q9P2S2 1712 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 TMEM212A6NML5 194 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 H3BSH0 61 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 RBMXL2O75526 392 aaKnown RBP4.48□□□□□ -1.69
CSMD3-203ENST00000343508 ATP1B1P05026 303 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 AMY2BP19961 511 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 CTNNB1P35222 781 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 CCR6P51684 374 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 TP53I3Q53FA7 332 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 AKR1C8PQ5T2L2 129 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 ZER1Q7Z7L7 766 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 CPXM2Q8N436 756 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms