RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 CLEC3AO75596 197 aa7.55□□□□□ -1.2
UBE4B-202ENST00000343090 INHBBP09529 407 aa7.55□□□□□ -1.2
UBE4B-202ENST00000343090 ACPPP15309 386 aa7.55□□□□□ -1.2
UBE4B-202ENST00000343090 HNRNPA2B1P22626 353 aaKnown RBP7.55□□□□□ -1.2
UBE4B-202ENST00000343090 CST5P28325 142 aaPredicted RBP7.55□□□□□ -1.2
UBE4B-202ENST00000343090 PFN3P60673 137 aa7.55□□□□□ -1.2
UBE4B-202ENST00000343090 PSPHP78330 225 aa7.55□□□□□ -1.2
UBE4B-202ENST00000343090 LTB4RQ15722 352 aa7.55□□□□□ -1.2
UBE4B-202ENST00000343090 SMAD2Q15796 467 aaKnown RBP7.55□□□□□ -1.2
UBE4B-202ENST00000343090 RAB11BQ15907 218 aa7.55□□□□□ -1.2
UBE4B-202ENST00000343090 CDONQ4KMG0 1287 aa7.55□□□□□ -1.2
UBE4B-202ENST00000343090 ALG10Q5BKT4 473 aa7.55□□□□□ -1.2
UBE4B-202ENST00000343090 KRBOX4Q5JUW0 171 aa7.55□□□□□ -1.2
UBE4B-202ENST00000343090 PRSS42Q7Z5A4 293 aa7.55□□□□□ -1.2
UBE4B-202ENST00000343090 OR2T4Q8NH00 348 aa7.55□□□□□ -1.2
UBE4B-202ENST00000343090 CHFRQ96EP1 664 aa7.55□□□□□ -1.2
UBE4B-202ENST00000343090 DEFB126Q9BYW3 111 aa7.55□□□□□ -1.2
UBE4B-202ENST00000343090 ERVK-19Q9WJR5 959 aa7.55□□□□□ -1.2
UBE4B-202ENST00000343090 HS3ST2Q9Y278 367 aa7.55□□□□□ -1.2
UBE4B-202ENST00000343090 PHIPQ8WWQ0 1821 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 TTLL8A6PVC2 850 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 PRAMEF2O60811 474 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 RAF1P04049 648 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 CLEC2LP0C7M8 214 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 GIPRP48546 466 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 TAP2Q03519 686 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 CHRFAM7AQ494W8 412 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 XKR7Q5GH72 579 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 ZMAT1Q5H9K5 638 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 C17orf107Q6ZR85 190 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 ZNF565Q8N9K5 539 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 L3MBTL4Q8NA19 623 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 UBTD2Q8WUN7 234 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 ACOT11Q8WXI4 607 aaPredicted RBP7.54□□□□□ -1.2
UBE4B-202ENST00000343090 TANKQ92844 425 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 ASB6Q9NWX5 421 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 CNOT2Q9NZN8 540 aaKnown RBP7.54□□□□□ -1.2
UBE4B-202ENST00000343090 ZNF443Q9Y2A4 671 aaPredicted RBP7.54□□□□□ -1.2
UBE4B-202ENST00000343090 DCDC2BA2VCK2 349 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 NPIPA2E9PIF3 369 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 NPIPA3F8WFD2 350 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 GOSR2O14653 212 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 LRRTM2O43300 516 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 MT-ND4P03905 459 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 AMY2AP04746 511 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 FURINP09958 794 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 LSSP48449 732 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 RPS25P62851 125 aaKnown RBP7.54□□□□□ -1.2
UBE4B-202ENST00000343090 ZNF169Q14929 603 aaPredicted RBP7.54□□□□□ -1.2
UBE4B-202ENST00000343090 PCGF3Q3KNV8 242 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 C18orf63Q68DL7 685 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 TIGD3Q6B0B8 471 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 ZNF852Q6ZMS4 543 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 GLCCI1Q86VQ1 547 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 BEST3Q8N1M1 668 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 C12orf45Q8N5I9 185 aaPredicted RBP7.54□□□□□ -1.2
UBE4B-202ENST00000343090 ZNF454Q8N9F8 522 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 GIMAP1Q8WWP7 306 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 SYT4Q9H2B2 425 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 EMC7Q9NPA0 242 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 PRDM9Q9NQV7 894 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 ACOXLQ9NUZ1 547 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 KLHL9Q9P2J3 617 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 C19orf25Q9UFG5 118 aaPredicted RBP7.54□□□□□ -1.2
UBE4B-202ENST00000343090 HYKKA2RU49 373 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 C17orf105B2RV13 164 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 H3BML4 177 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 SULT1B1O43704 296 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 IL33O95760 270 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 OPN1LWP04000 364 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 BAK1Q16611 211 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 PGGHGQ32M88 737 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 PGAM5Q96HS1 289 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 PITX2Q99697 317 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 GSX2Q9BZM3 304 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 P2RY12Q9H244 342 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 DUSP21Q9H596 190 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 SCPEP1Q9HB40 452 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 PRSS38A1L453 326 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 CDC14CA4D256 554 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 SLC9B1P1A6NJY1 282 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 RBMXP38159 391 aaKnown RBP7.54□□□□□ -1.2
UBE4B-202ENST00000343090 CASRP41180 1078 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 HERV-K104P61576 105 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 EXOSC2Q13868 293 aaKnown RBP7.54□□□□□ -1.2
UBE4B-202ENST00000343090 P2RY14Q15391 338 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 OR1Q1Q15612 314 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 DEFB133Q30KQ1 61 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 BAIAP2L2Q6UXY1 529 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 TMEM151BQ8IW70 566 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 MMP21Q8N119 569 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 OR13C2Q8NGS9 318 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 OR5K2Q8NHB8 316 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 NPRL2Q8WTW4 380 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 PNPLA2Q96AD5 504 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 ST6GAL2Q96JF0 529 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 POTEKPQ9BYX7 375 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 B3GAT2Q9NPZ5 323 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 RLIMQ9NVW2 624 aa7.54□□□□□ -1.2
UBE4B-202ENST00000343090 HCFC2Q9Y5Z7 792 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms