RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 YARS2Q9Y2Z4 477 aaKnown RBP6.7□□□□□ -1.34
VCAN-202ENST00000342785 MEMO1Q9Y316 297 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 TRDV1A0A1B0GX56 115 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 GPRIN2O60269 458 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 LCMT2O60294 686 aaKnown RBP6.7□□□□□ -1.34
VCAN-202ENST00000342785 PRSS23O95084 383 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 CTSLP07711 333 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 FBLP22087 321 aaKnown RBP6.7□□□□□ -1.34
VCAN-202ENST00000342785 PKLRP30613 574 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 PXNP49023 591 aaPredicted RBP6.7□□□□□ -1.34
VCAN-202ENST00000342785 HBMQ6B0K9 141 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 EIF5AL1Q6IS14 154 aaKnown RBP6.7□□□□□ -1.34
VCAN-202ENST00000342785 SPERTQ8NA61 448 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 YIPF6Q96EC8 236 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 TXNDC15Q96J42 360 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 LPAR4Q99677 370 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 METTL8Q9H825 291 aaKnown RBP6.7□□□□□ -1.34
VCAN-202ENST00000342785 DLEC1Q9Y238 1755 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 TMEM129A0AVI4 362 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 DCDC2BA2VCK2 349 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 H3BQ06 376 aaPredicted RBP6.7□□□□□ -1.34
VCAN-202ENST00000342785 UPK1AO00322 258 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 EGFP01133 1207 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 UGT2B7P16662 529 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 EIF4EBP2Q13542 120 aaPredicted RBP6.7□□□□□ -1.34
VCAN-202ENST00000342785 TMEM184AQ6ZMB5 413 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 PLCZ1Q86YW0 608 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 UBQLNLQ8IYU4 475 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 ZNF615Q8N8J6 731 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 ASB16Q96NS5 453 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 SCGB3A2Q96PL1 93 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 CDCA3Q99618 268 aaPredicted RBP6.7□□□□□ -1.34
VCAN-202ENST00000342785 ANKRD19PQ9H560 264 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 C12orf4Q9NQ89 552 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 TAS2R8Q9NYW2 309 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 TEX13DA0A0J9YY54 714 aaPredicted RBP6.7□□□□□ -1.34
VCAN-202ENST00000342785 ARPC1BO15143 372 aaKnown RBP6.7□□□□□ -1.34
VCAN-202ENST00000342785 S100A6P06703 90 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 HEXBP07686 556 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 SNRPBP14678 240 aaKnown RBP6.7□□□□□ -1.34
VCAN-202ENST00000342785 BSGP35613 385 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 OPRD1P41143 372 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 YBX1P67809 324 aaKnown RBP6.7□□□□□ -1.34
VCAN-202ENST00000342785 FOXK2Q01167 660 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 ERV3-1Q14264 604 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 WDR45BQ5MNZ6 344 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 RASGRP3Q8IV61 690 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 COQ8AQ8NI60 647 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 ZNF417Q8TAU3 575 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 CHMP1AQ9HD42 196 aaPredicted RBP6.7□□□□□ -1.34
VCAN-202ENST00000342785 AKIP1Q9NQ31 210 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 ABRACLQ9P1F3 81 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 ABCA3Q99758 1704 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 MEGF11A6BM72 1044 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 ANKRD33BA6NCL7 494 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 F5H0A9 414 aaPredicted RBP6.7□□□□□ -1.34
VCAN-202ENST00000342785 ZNF208O43345 1280 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 DUX1O43812 170 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 TSFMP43897 325 aaKnown RBP6.7□□□□□ -1.34
VCAN-202ENST00000342785 GRK1Q15835 563 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 ATAD3CQ5T2N8 411 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 SLC18B1Q6NT16 456 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 PRICKLE2Q7Z3G6 844 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 OR1E3Q8WZA6 343 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 TBC1D20Q96BZ9 403 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 C19orf25Q9UFG5 118 aaPredicted RBP6.7□□□□□ -1.34
VCAN-202ENST00000342785 POLHQ9Y253 713 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 A0A1W2PPL8 197 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 ZSCAN5BA6NJL1 495 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 ACOD1A6NK06 481 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 GAPDHSO14556 408 aaPredicted RBP6.69□□□□□ -1.34
VCAN-202ENST00000342785 OR2T1O43869 369 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 IFNA21P01568 189 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 EPHA5P54756 1037 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 RAB11BQ15907 218 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 SGCBQ16585 318 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 TRMT12Q53H54 448 aaKnown RBP6.69□□□□□ -1.34
VCAN-202ENST00000342785 C8orf82Q6P1X6 216 aaPredicted RBP6.69□□□□□ -1.34
VCAN-202ENST00000342785 FBXO42Q6P3S6 717 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 OR2A1Q8NGT9 310 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 OR52N1Q8NH53 320 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 ELMOD3Q96FG2 381 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 TOE1Q96GM8 510 aaKnown RBP6.69□□□□□ -1.34
VCAN-202ENST00000342785 GON7Q9BXV9 100 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 ATP13A2Q9NQ11 1180 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 ASB6Q9NWX5 421 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 CBLCQ9ULV8 474 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 V9GY05 133 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 PCP4L1A6NKN8 68 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 RP2O75695 350 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 PRH1P02810 166 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 AMY2AP04746 511 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 HTR1FP30939 366 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 METAP1P53582 386 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 ACTBP60709 375 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 ACTG1P63261 375 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 GPR18Q14330 331 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 RPL22L1Q6P5R6 122 aaKnown RBP6.69□□□□□ -1.34
VCAN-202ENST00000342785 OR5J2Q8NH18 312 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 FAM3CQ92520 227 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms