RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 OR10G3Q8NGC4 313 aa15.86■□□□□ 0.13
CLDN4-201ENST00000340958 DUSP19Q8WTR2 217 aa15.86■□□□□ 0.13
CLDN4-201ENST00000340958 MPP4Q96JB8 637 aa15.86■□□□□ 0.13
CLDN4-201ENST00000340958 RTN4RQ9BZR6 473 aa15.86■□□□□ 0.13
CLDN4-201ENST00000340958 CDRT15L2A8MXV6 281 aa15.85■□□□□ 0.13
CLDN4-201ENST00000340958 PIP5K1CO60331 668 aa15.85■□□□□ 0.13
CLDN4-201ENST00000340958 EPHA2P29317 976 aa15.85■□□□□ 0.13
CLDN4-201ENST00000340958 GPR4P46093 362 aa15.85■□□□□ 0.13
CLDN4-201ENST00000340958 ST13P50502 369 aaKnown RBP15.85■□□□□ 0.13
CLDN4-201ENST00000340958 CRISP1P54107 249 aa15.85■□□□□ 0.13
CLDN4-201ENST00000340958 RAPSNQ13702 412 aa15.85■□□□□ 0.13
CLDN4-201ENST00000340958 ZNF691Q5VV52 312 aa15.85■□□□□ 0.13
CLDN4-201ENST00000340958 B4GALNT2Q8NHY0 566 aa15.85■□□□□ 0.13
CLDN4-201ENST00000340958 HGDQ93099 445 aa15.85■□□□□ 0.13
CLDN4-201ENST00000340958 PRSS27Q9BQR3 290 aa15.85■□□□□ 0.13
CLDN4-201ENST00000340958 SDHAF3Q9NRP4 125 aa15.85■□□□□ 0.13
CLDN4-201ENST00000340958 IL17BQ9UHF5 180 aa15.85■□□□□ 0.13
CLDN4-201ENST00000340958 MYRFQ9Y2G1 1151 aa15.85■□□□□ 0.13
CLDN4-201ENST00000340958 C2orf72A6NCS6 295 aa15.84■□□□□ 0.13
CLDN4-201ENST00000340958 TMEM8BA6NDV4 472 aa15.84■□□□□ 0.13
CLDN4-201ENST00000340958 ELOA3DA6NLF2 546 aaPredicted RBP15.84■□□□□ 0.13
CLDN4-201ENST00000340958 TERTO14746 1132 aaKnown RBP15.84■□□□□ 0.13
CLDN4-201ENST00000340958 OR6B1O95007 311 aa15.84■□□□□ 0.13
CLDN4-201ENST00000340958 SERPINA7P05543 415 aa15.84■□□□□ 0.13
CLDN4-201ENST00000340958 IFI30P13284 250 aa15.84■□□□□ 0.13
CLDN4-201ENST00000340958 PGCP20142 388 aa15.84■□□□□ 0.13
CLDN4-201ENST00000340958 CHMP24386 653 aa15.84■□□□□ 0.13
CLDN4-201ENST00000340958 MYBPC1Q00872 1141 aa15.84■□□□□ 0.13
CLDN4-201ENST00000340958 C17orf67Q0P5P2 114 aa15.84■□□□□ 0.13
CLDN4-201ENST00000340958 TGIF1Q15583 401 aa15.84■□□□□ 0.13
CLDN4-201ENST00000340958 ELOA3BQ3SY89 546 aa15.84■□□□□ 0.13
CLDN4-201ENST00000340958 OR5M10Q6IEU7 315 aa15.84■□□□□ 0.13
CLDN4-201ENST00000340958 TMEM154Q6P9G4 183 aa15.84■□□□□ 0.13
CLDN4-201ENST00000340958 WDR88Q6ZMY6 472 aa15.84■□□□□ 0.13
CLDN4-201ENST00000340958 Q6ZPB1 254 aaPredicted RBP15.84■□□□□ 0.13
CLDN4-201ENST00000340958 KDF1Q8NAX2 398 aaPredicted RBP15.84■□□□□ 0.13
CLDN4-201ENST00000340958 ELOA3Q8NG57 546 aa15.84■□□□□ 0.13
CLDN4-201ENST00000340958 OR5W2Q8NH69 310 aa15.84■□□□□ 0.13
CLDN4-201ENST00000340958 PFN4Q8NHR9 129 aa15.84■□□□□ 0.13
CLDN4-201ENST00000340958 IP6K3Q96PC2 410 aa15.84■□□□□ 0.13
CLDN4-201ENST00000340958 ADNPQ9H2P0 1102 aa15.84■□□□□ 0.13
CLDN4-201ENST00000340958 IMPAD1Q9NX62 359 aa15.84■□□□□ 0.13
CLDN4-201ENST00000340958 DKK4Q9UBT3 224 aa15.84■□□□□ 0.13
CLDN4-201ENST00000340958 NDRG4Q9ULP0 352 aaKnown RBP15.84■□□□□ 0.13
CLDN4-201ENST00000340958 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.84■□□□□ 0.13
CLDN4-201ENST00000340958 TAF4O00268 1085 aa15.84■□□□□ 0.13
CLDN4-201ENST00000340958 OMPP47874 163 aa15.84■□□□□ 0.13
CLDN4-201ENST00000340958 P2RX1P51575 399 aa15.84■□□□□ 0.13
CLDN4-201ENST00000340958 TSPAN31Q12999 210 aa15.84■□□□□ 0.13
CLDN4-201ENST00000340958 PTGES3Q15185 160 aaKnown RBP15.84■□□□□ 0.13
CLDN4-201ENST00000340958 NTRK2Q16620 822 aa15.84■□□□□ 0.13
CLDN4-201ENST00000340958 SIRT6Q8N6T7 355 aa15.84■□□□□ 0.13
CLDN4-201ENST00000340958 FAM81AQ8TBF8 368 aa15.84■□□□□ 0.13
CLDN4-201ENST00000340958 THOC3Q96J01 351 aaKnown RBP15.84■□□□□ 0.13
CLDN4-201ENST00000340958 GALNT9Q9HCQ5 603 aa15.84■□□□□ 0.13
CLDN4-201ENST00000340958 ASCL3Q9NQ33 180 aa15.84■□□□□ 0.13
CLDN4-201ENST00000340958 HPF1Q9NWY4 346 aa15.84■□□□□ 0.13
CLDN4-201ENST00000340958 PPP4R1LQ9P1A2 415 aa15.84■□□□□ 0.13
CLDN4-201ENST00000340958 SAGP10523 405 aaPredicted RBP15.83■□□□□ 0.12
CLDN4-201ENST00000340958 PNMTP11086 282 aa15.83■□□□□ 0.12
CLDN4-201ENST00000340958 RBM34P42696 430 aaKnown RBP15.83■□□□□ 0.12
CLDN4-201ENST00000340958 MLF1P58340 268 aa15.83■□□□□ 0.12
CLDN4-201ENST00000340958 CDC42P60953 191 aa15.83■□□□□ 0.12
CLDN4-201ENST00000340958 LYPD8Q6UX82 237 aa15.83■□□□□ 0.12
CLDN4-201ENST00000340958 TEX47Q8TBZ9 253 aa15.83■□□□□ 0.12
CLDN4-201ENST00000340958 HRASLS5Q96KN8 279 aa15.83■□□□□ 0.12
CLDN4-201ENST00000340958 REV1Q9UBZ9 1251 aa15.83■□□□□ 0.12
CLDN4-201ENST00000340958 ICAM5Q9UMF0 924 aa15.83■□□□□ 0.12
CLDN4-201ENST00000340958 TMEM5Q9Y2B1 443 aa15.83■□□□□ 0.12
CLDN4-201ENST00000340958 CFAP47Q6ZTR5 3102 aa15.83■□□□□ 0.12
CLDN4-201ENST00000340958 C17orf51A8MQB3 221 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 MAN1A2O60476 641 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 CDC40O60508 579 aaKnown RBP eCLIP15.82■□□□□ 0.12
CLDN4-201ENST00000340958 DXOO77932 396 aaKnown RBP15.82■□□□□ 0.12
CLDN4-201ENST00000340958 LYPD3O95274 346 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 LIPCP11150 499 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 GP1BBP13224 206 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 FPR3P25089 353 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 ELK4P28324 431 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 GGT2P36268 569 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 Q0VFX4 171 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 MEP1AQ16819 746 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 COL28A1Q2UY09 1125 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 TMEM236Q5W0B7 351 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 BICRALQ6AI39 1079 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 CD300LDQ6UXZ3 194 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 DTX1Q86Y01 620 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 P3H2Q8IVL5 708 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 DND1Q8IYX4 353 aaKnown RBP15.82■□□□□ 0.12
CLDN4-201ENST00000340958 DEPDC4Q8N2C3 294 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 BRIX1Q8TDN6 353 aaKnown RBP15.82■□□□□ 0.12
CLDN4-201ENST00000340958 C3orf49Q96BT1 292 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 BPIFA2Q96DR5 249 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 GPA33Q99795 319 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 DPH1Q9BZG8 443 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 RASSF1Q9NS23 344 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 ZMIZ1Q9ULJ6 1067 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 HSPE1-MOB4S4R3N1 261 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 URB1O60287 2271 aaKnown RBP15.82■□□□□ 0.12
CLDN4-201ENST00000340958 LIFP15018 202 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms