RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 SLC46A3Q7Z3Q1 461 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 GALNT6Q8NCL4 622 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 OR2T33Q8NG76 320 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 BRIX1Q8TDN6 353 aaKnown RBP13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 CLIP3Q96DZ5 547 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 LRR1Q96L50 414 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 ZNF582Q96NG8 517 aaPredicted RBP13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 LRFN5Q96NI6 719 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 ZPBPQ9BS86 351 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 MKKSQ9NPJ1 570 aaPredicted RBP13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 PNO1Q9NRX1 252 aaKnown RBP13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 CHCHD3Q9NX63 227 aaKnown RBP13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 CLCA3PQ9Y6N3 262 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 CELSR3Q9NYQ7 3312 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 TRABD2BA6NFA1 517 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 OR2W5A6NFC9 320 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 EFCAB9A8MZ26 197 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 NPIPB9F8W1W9 429 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 AIREO43918 545 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 CT45A8P0DMV1 189 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 CT45A9P0DMV2 189 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 IFI30P13284 250 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 BMP7P18075 431 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 PPICP45877 212 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 CTBP2P56545 445 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 EFNB1P98172 346 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 RAB40BQ12829 278 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 AQP6Q13520 282 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 RTP5Q14D33 572 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 MED22Q15528 200 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 PGGHGQ32M88 737 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 MINDY4Q4G0A6 757 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 NKAIN1Q4KMZ8 207 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 CT45A2Q5DJT8 189 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 ARMCX4Q5H9R4 360 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 IGF2-ASQ6U949 168 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 BCORP1Q8N888 145 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 LSMEM1Q8N8F7 131 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 POGLUT1Q8NBL1 392 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 OR14A16Q8NHC5 309 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 TBC1D15Q8TC07 691 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 CNOT9Q92600 299 aaKnown RBP13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 DAZLQ92904 295 aaKnown RBP13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 SENP5Q96HI0 755 aaPredicted RBP13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 CCNL2Q96S94 520 aaPredicted RBP13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 PLA2G12AQ9BZM1 189 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 B3GNT4Q9C0J1 378 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 SLC7A5P2Q9GIP4 190 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 NRSN2Q9GZP1 204 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 DSN1Q9H410 356 aa13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 MRPS18AQ9NVS2 196 aaKnown RBP13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 DNAJB12Q9NXW2 375 aaKnown RBP13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 ZNF223Q9UK11 482 aaPredicted RBP13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 DIMT1Q9UNQ2 313 aaKnown RBP13.97□□□□□ -0.17
TUBB4B-201ENST00000340384 SDK2Q58EX2 2172 aa13.96□□□□□ -0.17
TUBB4B-201ENST00000340384 IGKV3D-11A0A0A0MRZ8 115 aa13.96□□□□□ -0.17
TUBB4B-201ENST00000340384 A0A0B4J2E0 115 aa13.96□□□□□ -0.17
TUBB4B-201ENST00000340384 A0A1B0GX12 115 aa13.96□□□□□ -0.17
TUBB4B-201ENST00000340384 KDM4EB2RXH2 506 aaPredicted RBP13.96□□□□□ -0.17
TUBB4B-201ENST00000340384 M0R082 166 aa13.96□□□□□ -0.17
TUBB4B-201ENST00000340384 HRKO00198 91 aa13.96□□□□□ -0.17
TUBB4B-201ENST00000340384 MYL12BO14950 172 aa13.96□□□□□ -0.17
TUBB4B-201ENST00000340384 PIP5K1CO60331 668 aa13.96□□□□□ -0.17
TUBB4B-201ENST00000340384 DXOO77932 396 aaKnown RBP13.96□□□□□ -0.17
TUBB4B-201ENST00000340384 PTHP01270 115 aa13.96□□□□□ -0.17
TUBB4B-201ENST00000340384 IGKV1D-16P01601 117 aa13.96□□□□□ -0.17
TUBB4B-201ENST00000340384 MYL12AP19105 171 aa13.96□□□□□ -0.17
TUBB4B-201ENST00000340384 GRK5P34947 590 aa13.96□□□□□ -0.17
TUBB4B-201ENST00000340384 UGT2B10P36537 528 aa13.96□□□□□ -0.17
TUBB4B-201ENST00000340384 PSPHP78330 225 aa13.96□□□□□ -0.17
TUBB4B-201ENST00000340384 LSM11P83369 360 aaKnown RBP eCLIP13.96□□□□□ -0.17
TUBB4B-201ENST00000340384 TMPRSS11FQ6ZWK6 438 aa13.96□□□□□ -0.17
TUBB4B-201ENST00000340384 ZAR1Q86SH2 424 aa13.96□□□□□ -0.17
TUBB4B-201ENST00000340384 SLC34A3Q8N130 599 aa13.96□□□□□ -0.17
TUBB4B-201ENST00000340384 PROKR2Q8NFJ6 384 aa13.96□□□□□ -0.17
TUBB4B-201ENST00000340384 KBTBD8Q8NFY9 601 aa13.96□□□□□ -0.17
TUBB4B-201ENST00000340384 OR4N2Q8NGD1 307 aa13.96□□□□□ -0.17
TUBB4B-201ENST00000340384 OR8D4Q8NGM9 314 aa13.96□□□□□ -0.17
TUBB4B-201ENST00000340384 OR9Q1Q8NGQ5 310 aa13.96□□□□□ -0.17
TUBB4B-201ENST00000340384 FANK1Q8TC84 345 aa13.96□□□□□ -0.17
TUBB4B-201ENST00000340384 LGALS12Q96DT0 336 aa13.96□□□□□ -0.17
TUBB4B-201ENST00000340384 ZHX1-C8orf76Q96EF9 292 aa13.96□□□□□ -0.17
TUBB4B-201ENST00000340384 CTSFQ9UBX1 484 aa13.96□□□□□ -0.17
TUBB4B-201ENST00000340384 DTX4Q9Y2E6 619 aa13.96□□□□□ -0.17
TUBB4B-201ENST00000340384 HTR3EA5X5Y0 456 aa13.95□□□□□ -0.18
TUBB4B-201ENST00000340384 FRG2CA6NGY1 282 aa13.95□□□□□ -0.18
TUBB4B-201ENST00000340384 SERINC4A6NH21 518 aa13.95□□□□□ -0.18
TUBB4B-201ENST00000340384 CCRL2O00421 344 aa13.95□□□□□ -0.18
TUBB4B-201ENST00000340384 HCN1O60741 890 aa13.95□□□□□ -0.18
TUBB4B-201ENST00000340384 LYPD3O95274 346 aa13.95□□□□□ -0.18
TUBB4B-201ENST00000340384 CSTAP01040 98 aa13.95□□□□□ -0.18
TUBB4B-201ENST00000340384 HBQ1P09105 142 aa13.95□□□□□ -0.18
TUBB4B-201ENST00000340384 HPGDP15428 266 aa13.95□□□□□ -0.18
TUBB4B-201ENST00000340384 NR4A1P22736 598 aa13.95□□□□□ -0.18
TUBB4B-201ENST00000340384 CALRP27797 417 aaKnown RBP13.95□□□□□ -0.18
TUBB4B-201ENST00000340384 LIPAP38571 399 aa13.95□□□□□ -0.18
TUBB4B-201ENST00000340384 RGS6P49758 472 aa13.95□□□□□ -0.18
TUBB4B-201ENST00000340384 GPR143P51810 404 aa13.95□□□□□ -0.18
TUBB4B-201ENST00000340384 COPZ1P61923 177 aa13.95□□□□□ -0.18
TUBB4B-201ENST00000340384 DCDP81605 110 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms