RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 P2RX2Q9UBL9 471 aa13.08□□□□□ -0.32
ERCC1-203ENST00000340192 CLEC4AQ9UMR7 237 aa13.08□□□□□ -0.32
ERCC1-203ENST00000340192 A6NNC1 897 aa13.07□□□□□ -0.32
ERCC1-203ENST00000340192 NR5A2O00482 541 aa13.07□□□□□ -0.32
ERCC1-203ENST00000340192 SS18L1O75177 396 aaPredicted RBP13.07□□□□□ -0.32
ERCC1-203ENST00000340192 CD8BP10966 210 aa13.07□□□□□ -0.32
ERCC1-203ENST00000340192 EPXP11678 715 aa13.07□□□□□ -0.32
ERCC1-203ENST00000340192 IL7RP16871 459 aa13.07□□□□□ -0.32
ERCC1-203ENST00000340192 HOXB9P17482 250 aaPredicted RBP13.07□□□□□ -0.32
ERCC1-203ENST00000340192 RPS4Y1P22090 263 aaKnown RBP13.07□□□□□ -0.32
ERCC1-203ENST00000340192 RYKP34925 604 aa13.07□□□□□ -0.32
ERCC1-203ENST00000340192 DSTNP60981 165 aa13.07□□□□□ -0.32
ERCC1-203ENST00000340192 MERTKQ12866 999 aa13.07□□□□□ -0.32
ERCC1-203ENST00000340192 ZNF239Q16600 458 aaKnown RBP13.07□□□□□ -0.32
ERCC1-203ENST00000340192 C3orf33Q6P1S2 294 aa13.07□□□□□ -0.32
ERCC1-203ENST00000340192 ZNF474Q6S9Z5 364 aaPredicted RBP13.07□□□□□ -0.32
ERCC1-203ENST00000340192 CDH24Q86UP0 819 aa13.07□□□□□ -0.32
ERCC1-203ENST00000340192 CMIPQ8IY22 773 aa13.07□□□□□ -0.32
ERCC1-203ENST00000340192 ARFGAP2Q8N6H7 521 aa13.07□□□□□ -0.32
ERCC1-203ENST00000340192 ZNF610Q8N9Z0 462 aa13.07□□□□□ -0.32
ERCC1-203ENST00000340192 SLC38A5Q8WUX1 472 aa13.07□□□□□ -0.32
ERCC1-203ENST00000340192 WDR60Q8WVS4 1066 aa13.07□□□□□ -0.32
ERCC1-203ENST00000340192 ROBO4Q8WZ75 1007 aa13.07□□□□□ -0.32
ERCC1-203ENST00000340192 CNOT9Q92600 299 aaKnown RBP13.07□□□□□ -0.32
ERCC1-203ENST00000340192 PMM1Q92871 262 aa13.07□□□□□ -0.32
ERCC1-203ENST00000340192 CPNE4Q96A23 557 aaPredicted RBP13.07□□□□□ -0.32
ERCC1-203ENST00000340192 COQ10BQ9H8M1 238 aa13.07□□□□□ -0.32
ERCC1-203ENST00000340192 NPHS2Q9NP85 383 aa13.07□□□□□ -0.32
ERCC1-203ENST00000340192 SLC52A3Q9NQ40 469 aa13.07□□□□□ -0.32
ERCC1-203ENST00000340192 EXOSC3Q9NQT5 275 aaKnown RBP13.07□□□□□ -0.32
ERCC1-203ENST00000340192 ACER3Q9NUN7 267 aa13.07□□□□□ -0.32
ERCC1-203ENST00000340192 DNAJB12Q9NXW2 375 aaKnown RBP13.07□□□□□ -0.32
ERCC1-203ENST00000340192 EMC9Q9Y3B6 208 aa13.07□□□□□ -0.32
ERCC1-203ENST00000340192 CELSR1Q9NYQ6 3014 aa13.07□□□□□ -0.32
ERCC1-203ENST00000340192 A0A096LPI6 279 aa13.06□□□□□ -0.32
ERCC1-203ENST00000340192 FAM221AA4D161 298 aa13.06□□□□□ -0.32
ERCC1-203ENST00000340192 ENO4A6NNW6 628 aa13.06□□□□□ -0.32
ERCC1-203ENST00000340192 EDF1O60869 148 aaKnown RBP13.06□□□□□ -0.32
ERCC1-203ENST00000340192 ADAM11O75078 769 aa13.06□□□□□ -0.32
ERCC1-203ENST00000340192 BCHEP06276 602 aa13.06□□□□□ -0.32
ERCC1-203ENST00000340192 DBIP07108 87 aaKnown RBP13.06□□□□□ -0.32
ERCC1-203ENST00000340192 TFPTP0C1Z6 253 aa13.06□□□□□ -0.32
ERCC1-203ENST00000340192 NID1P14543 1247 aa13.06□□□□□ -0.32
ERCC1-203ENST00000340192 SLC7A1P30825 629 aa13.06□□□□□ -0.32
ERCC1-203ENST00000340192 CD79BP40259 229 aa13.06□□□□□ -0.32
ERCC1-203ENST00000340192 ATP4BP51164 291 aa13.06□□□□□ -0.32
ERCC1-203ENST00000340192 CTBP2P56545 445 aa13.06□□□□□ -0.32
ERCC1-203ENST00000340192 IRX1P78414 480 aaPredicted RBP13.06□□□□□ -0.32
ERCC1-203ENST00000340192 FAM27E3Q08E93 113 aa13.06□□□□□ -0.32
ERCC1-203ENST00000340192 SQLEQ14534 574 aa13.06□□□□□ -0.32
ERCC1-203ENST00000340192 DAZAP2Q15038 168 aaPredicted RBP13.06□□□□□ -0.32
ERCC1-203ENST00000340192 AGKQ53H12 422 aa13.06□□□□□ -0.32
ERCC1-203ENST00000340192 PLEKHM3Q6ZWE6 761 aa13.06□□□□□ -0.32
ERCC1-203ENST00000340192 LURAP1LQ8IV03 231 aa13.06□□□□□ -0.32
ERCC1-203ENST00000340192 OR6K3Q8NGY3 331 aa13.06□□□□□ -0.32
ERCC1-203ENST00000340192 ZNF563Q8TA94 476 aa13.06□□□□□ -0.32
ERCC1-203ENST00000340192 RNF128Q8TEB7 428 aa13.06□□□□□ -0.32
ERCC1-203ENST00000340192 STON2Q8WXE9 905 aa13.06□□□□□ -0.32
ERCC1-203ENST00000340192 SPDL1Q96EA4 605 aa13.06□□□□□ -0.32
ERCC1-203ENST00000340192 REXO5Q96IC2 774 aaKnown RBP13.06□□□□□ -0.32
ERCC1-203ENST00000340192 SLC39A3Q9BRY0 314 aa13.06□□□□□ -0.32
ERCC1-203ENST00000340192 POLDIP3Q9BY77 421 aaKnown RBP13.06□□□□□ -0.32
ERCC1-203ENST00000340192 GLRX2Q9NS18 164 aa13.06□□□□□ -0.32
ERCC1-203ENST00000340192 RASSF1Q9NS23 344 aa13.06□□□□□ -0.32
ERCC1-203ENST00000340192 TMEM45AQ9NWC5 275 aa13.06□□□□□ -0.32
ERCC1-203ENST00000340192 DCTN4Q9UJW0 460 aa13.06□□□□□ -0.32
ERCC1-203ENST00000340192 PROCRQ9UNN8 238 aa13.06□□□□□ -0.32
ERCC1-203ENST00000340192 DSPPQ9NZW4 1301 aa13.06□□□□□ -0.32
ERCC1-203ENST00000340192 UQCRHLA0A096LP55 91 aa13.05□□□□□ -0.32
ERCC1-203ENST00000340192 A0A1W2PNR3 127 aa13.05□□□□□ -0.32
ERCC1-203ENST00000340192 SH3D21A4FU49 640 aa13.05□□□□□ -0.32
ERCC1-203ENST00000340192 CLIC1O00299 241 aa13.05□□□□□ -0.32
ERCC1-203ENST00000340192 AP3D1O14617 1153 aa13.05□□□□□ -0.32
ERCC1-203ENST00000340192 PABPC4LP0CB38 370 aaKnown RBP13.05□□□□□ -0.32
ERCC1-203ENST00000340192 CD1EP15812 388 aa13.05□□□□□ -0.32
ERCC1-203ENST00000340192 NCF2P19878 526 aaPredicted RBP13.05□□□□□ -0.32
ERCC1-203ENST00000340192 KCNJ5P48544 419 aa13.05□□□□□ -0.32
ERCC1-203ENST00000340192 CRISP3P54108 245 aa13.05□□□□□ -0.32
ERCC1-203ENST00000340192 GNA13Q14344 377 aa13.05□□□□□ -0.32
ERCC1-203ENST00000340192 RGNQ15493 299 aa13.05□□□□□ -0.32
ERCC1-203ENST00000340192 RPS26P11Q5JNZ5 115 aaPredicted RBP13.05□□□□□ -0.32
ERCC1-203ENST00000340192 PAGE3Q5JUK9 113 aa13.05□□□□□ -0.32
ERCC1-203ENST00000340192 LRIF1Q5T3J3 769 aa13.05□□□□□ -0.32
ERCC1-203ENST00000340192 MRPL2Q5T653 305 aaKnown RBP13.05□□□□□ -0.32
ERCC1-203ENST00000340192 GTF2IRD2BQ6EKJ0 949 aa13.05□□□□□ -0.32
ERCC1-203ENST00000340192 GTF2IRD2Q86UP8 949 aa13.05□□□□□ -0.32
ERCC1-203ENST00000340192 MSRB3Q8IXL7 192 aa13.05□□□□□ -0.32
ERCC1-203ENST00000340192 PEX5LQ8IYB4 626 aa13.05□□□□□ -0.32
ERCC1-203ENST00000340192 ABHD3Q8WU67 409 aa13.05□□□□□ -0.32
ERCC1-203ENST00000340192 NRGNQ92686 78 aa13.05□□□□□ -0.32
ERCC1-203ENST00000340192 DACH2Q96NX9 599 aa13.05□□□□□ -0.32
ERCC1-203ENST00000340192 OR5B2Q96R09 309 aa13.05□□□□□ -0.32
ERCC1-203ENST00000340192 CCDC106Q9BWC9 280 aa13.05□□□□□ -0.32
ERCC1-203ENST00000340192 CLEC4MQ9H2X3 399 aaPredicted RBP13.05□□□□□ -0.32
ERCC1-203ENST00000340192 CTPS2Q9NRF8 586 aa13.05□□□□□ -0.32
ERCC1-203ENST00000340192 PLSCR4Q9NRQ2 329 aa13.05□□□□□ -0.32
ERCC1-203ENST00000340192 SERINC1Q9NRX5 453 aa13.05□□□□□ -0.32
ERCC1-203ENST00000340192 THUMPD1Q9NXG2 353 aaKnown RBP13.05□□□□□ -0.32
ERCC1-203ENST00000340192 ELOVL5Q9NYP7 299 aa13.05□□□□□ -0.32
ERCC1-203ENST00000340192 SLC25A37Q9NYZ2 338 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms