RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 SFTPDP35247 375 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 TIMP3P35625 211 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 SLC6A8P48029 635 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 ART3Q13508 389 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 RABL3Q5HYI8 236 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 ZNF311Q5JNZ3 666 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 RNF220Q5VTB9 566 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 CLIP4Q8N3C7 705 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 C9orf106Q8NAJ2 232 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 C11orf65Q8NCR3 313 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 MBD3L2Q8NHZ7 208 aaPredicted RBP13.73□□□□□ -0.21
UBE3B-201ENST00000340074 ASB5Q8WWX0 329 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 TMEM234Q8WY98 164 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 ST8SIA1Q92185 356 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 ZNF845Q96IR2 970 aaPredicted RBP13.73□□□□□ -0.21
UBE3B-201ENST00000340074 UCN2Q96RP3 112 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 PINK1Q9BXM7 581 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 PIF1Q9H611 641 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 GID8Q9NWU2 228 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 ETV2O00321 342 aaPredicted RBP13.72□□□□□ -0.21
UBE3B-201ENST00000340074 TNFSF11O14788 317 aa13.72□□□□□ -0.21
UBE3B-201ENST00000340074 TGM6O95932 706 aa13.72□□□□□ -0.21
UBE3B-201ENST00000340074 GKN3PP0CG01 181 aa13.72□□□□□ -0.21
UBE3B-201ENST00000340074 SHC1P29353 583 aa13.72□□□□□ -0.21
UBE3B-201ENST00000340074 AQP1P29972 269 aa13.72□□□□□ -0.21
UBE3B-201ENST00000340074 IDH2P48735 452 aaKnown RBP13.72□□□□□ -0.21
UBE3B-201ENST00000340074 RPS3AP61247 264 aaKnown RBP13.72□□□□□ -0.21
UBE3B-201ENST00000340074 RBBP4Q09028 425 aa13.72□□□□□ -0.21
UBE3B-201ENST00000340074 CTU2Q2VPK5 515 aaKnown RBP13.72□□□□□ -0.21
UBE3B-201ENST00000340074 NET1Q7Z628 596 aaPredicted RBP13.72□□□□□ -0.21
UBE3B-201ENST00000340074 SERPINA11Q86U17 422 aa13.72□□□□□ -0.21
UBE3B-201ENST00000340074 KRT73Q86Y46 540 aa13.72□□□□□ -0.21
UBE3B-201ENST00000340074 GRAMD2AQ8IUY3 354 aa13.72□□□□□ -0.21
UBE3B-201ENST00000340074 LIX1LQ8IVB5 337 aa13.72□□□□□ -0.21
UBE3B-201ENST00000340074 HIPK4Q8NE63 616 aa13.72□□□□□ -0.21
UBE3B-201ENST00000340074 ATP6V1C2Q8NEY4 427 aa13.72□□□□□ -0.21
UBE3B-201ENST00000340074 OR8J3Q8NGG0 315 aa13.72□□□□□ -0.21
UBE3B-201ENST00000340074 CCT8L2Q96SF2 557 aa13.72□□□□□ -0.21
UBE3B-201ENST00000340074 SH3GL1Q99961 368 aa13.72□□□□□ -0.21
UBE3B-201ENST00000340074 SPATA9Q9BWV2 254 aa13.72□□□□□ -0.21
UBE3B-201ENST00000340074 RSPO3Q9BXY4 272 aaPredicted RBP13.72□□□□□ -0.21
UBE3B-201ENST00000340074 ACER3Q9NUN7 267 aa13.72□□□□□ -0.21
UBE3B-201ENST00000340074 ARL2BPQ9Y2Y0 163 aa13.72□□□□□ -0.21
UBE3B-201ENST00000340074 FLNBO75369 2602 aaKnown RBP13.71□□□□□ -0.21
UBE3B-201ENST00000340074 A0A0J9YW62 118 aa13.71□□□□□ -0.22
UBE3B-201ENST00000340074 CFAP73A6NFT4 308 aa13.71□□□□□ -0.22
UBE3B-201ENST00000340074 FAM90A27PA6NNH2 459 aa13.71□□□□□ -0.22
UBE3B-201ENST00000340074 HSPB2A8KAH6 182 aa13.71□□□□□ -0.22
UBE3B-201ENST00000340074 PRSS44E7EML9 344 aa13.71□□□□□ -0.22
UBE3B-201ENST00000340074 AIM2O14862 343 aa13.71□□□□□ -0.22
UBE3B-201ENST00000340074 GP1BBP13224 206 aa13.71□□□□□ -0.22
UBE3B-201ENST00000340074 COL8A1P27658 744 aa13.71□□□□□ -0.22
UBE3B-201ENST00000340074 HTR1EP28566 365 aa13.71□□□□□ -0.22
UBE3B-201ENST00000340074 EIF1AXP47813 144 aaKnown RBP13.71□□□□□ -0.22
UBE3B-201ENST00000340074 GZMMP51124 257 aa13.71□□□□□ -0.22
UBE3B-201ENST00000340074 ZNF136P52737 540 aa13.71□□□□□ -0.22
UBE3B-201ENST00000340074 EPS8Q12929 822 aa13.71□□□□□ -0.22
UBE3B-201ENST00000340074 HSPB2Q16082 182 aa13.71□□□□□ -0.22
UBE3B-201ENST00000340074 SGCBQ16585 318 aa13.71□□□□□ -0.22
UBE3B-201ENST00000340074 HIST2H2BCQ6DN03 193 aa13.71□□□□□ -0.22
UBE3B-201ENST00000340074 POMZP3Q6PJE2 187 aa13.71□□□□□ -0.22
UBE3B-201ENST00000340074 ESPNLQ6ZVH7 1005 aa13.71□□□□□ -0.22
UBE3B-201ENST00000340074 PLEKHM3Q6ZWE6 761 aa13.71□□□□□ -0.22
UBE3B-201ENST00000340074 ZZZ3Q8IYH5 903 aa13.71□□□□□ -0.22
UBE3B-201ENST00000340074 ZNF440Q8IYI8 595 aa13.71□□□□□ -0.22
UBE3B-201ENST00000340074 OR10D3Q8NH80 312 aa13.71□□□□□ -0.22
UBE3B-201ENST00000340074 LILRB4Q8NHJ6 448 aa13.71□□□□□ -0.22
UBE3B-201ENST00000340074 FIG4Q92562 907 aa13.71□□□□□ -0.22
UBE3B-201ENST00000340074 WNT2BQ93097 391 aa13.71□□□□□ -0.22
UBE3B-201ENST00000340074 ADGRG7Q96K78 797 aa13.71□□□□□ -0.22
UBE3B-201ENST00000340074 KLHL15Q96M94 604 aa13.71□□□□□ -0.22
UBE3B-201ENST00000340074 TM9SF2Q99805 663 aa13.71□□□□□ -0.22
UBE3B-201ENST00000340074 ECSITQ9BQ95 431 aa13.71□□□□□ -0.22
UBE3B-201ENST00000340074 UCK2Q9BZX2 261 aa13.71□□□□□ -0.22
UBE3B-201ENST00000340074 ARMC7Q9H6L4 198 aa13.71□□□□□ -0.22
UBE3B-201ENST00000340074 ANGPT4Q9Y264 503 aa13.71□□□□□ -0.22
UBE3B-201ENST00000340074 KLF2Q9Y5W3 355 aaPredicted RBP13.71□□□□□ -0.22
UBE3B-201ENST00000340074 NKX2-6A6NCS4 301 aa13.7□□□□□ -0.22
UBE3B-201ENST00000340074 SLC22A20A6NK97 555 aa13.7□□□□□ -0.22
UBE3B-201ENST00000340074 ADAMDEC1O15204 470 aa13.7□□□□□ -0.22
UBE3B-201ENST00000340074 GRNP28799 593 aaKnown RBP13.7□□□□□ -0.22
UBE3B-201ENST00000340074 PRKAR1BP31321 381 aa13.7□□□□□ -0.22
UBE3B-201ENST00000340074 ACAA2P42765 397 aaKnown RBP13.7□□□□□ -0.22
UBE3B-201ENST00000340074 DLX5P56178 289 aa13.7□□□□□ -0.22
UBE3B-201ENST00000340074 MERTKQ12866 999 aa13.7□□□□□ -0.22
UBE3B-201ENST00000340074 SELENBP1Q13228 472 aa13.7□□□□□ -0.22
UBE3B-201ENST00000340074 PON3Q15166 354 aa13.7□□□□□ -0.22
UBE3B-201ENST00000340074 ZSWIM7Q19AV6 140 aa13.7□□□□□ -0.22
UBE3B-201ENST00000340074 TMEM176BQ3YBM2 270 aaPredicted RBP13.7□□□□□ -0.22
UBE3B-201ENST00000340074 P4HA3Q7Z4N8 544 aa13.7□□□□□ -0.22
UBE3B-201ENST00000340074 OR2V1Q8NHB1 315 aa13.7□□□□□ -0.22
UBE3B-201ENST00000340074 CMTM5Q96DZ9 223 aa13.7□□□□□ -0.22
UBE3B-201ENST00000340074 ZNF607Q96SK3 696 aa13.7□□□□□ -0.22
UBE3B-201ENST00000340074 SPATA5L1Q9BVQ7 753 aa13.7□□□□□ -0.22
UBE3B-201ENST00000340074 SETXQ7Z333 2677 aaKnown RBP13.69□□□□□ -0.22
UBE3B-201ENST00000340074 CELSR2Q9HCU4 2923 aa13.69□□□□□ -0.22
UBE3B-201ENST00000340074 GJE1A6NN92 205 aa13.69□□□□□ -0.22
UBE3B-201ENST00000340074 FAAHO00519 579 aa13.69□□□□□ -0.22
UBE3B-201ENST00000340074 FRS3O43559 492 aa13.69□□□□□ -0.22
UBE3B-201ENST00000340074 CXCL13O43927 109 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms