RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 ERFP50548 548 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 CCR9P51686 369 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 F2RL1P55085 397 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 GNB2P62879 340 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF763Q0D2J5 394 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 GRM7Q14831 915 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 CHRNA6Q15825 494 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 PFKFB4Q16877 469 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 ZXDCQ2QGD7 858 aaPredicted RBP3.09□□□□□ -1.91
CSMD3-202ENST00000339701 RNF220Q5VTB9 566 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 PNCKQ6P2M8 343 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 GCNT7Q6ZNI0 430 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 GRAMD2AQ8IUY3 354 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 PRR22Q8IZ63 422 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 OR8H3Q8N146 312 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 FBXL14Q8N1E6 418 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 BEST3Q8N1M1 668 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 KDM8Q8N371 416 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 GTPBP8Q8N3Z3 284 aaPredicted RBP3.09□□□□□ -1.91
CSMD3-202ENST00000339701 TEX26Q8N6G2 289 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 OR5AK2Q8NH90 309 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 MITD1Q8WV92 249 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 ADIPOR1Q96A54 375 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 MMABQ96EY8 250 aaPredicted RBP3.09□□□□□ -1.91
CSMD3-202ENST00000339701 BORCS8Q96FH0 119 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 OR2M4Q96R27 311 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 DERL2Q9GZP9 239 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 PLK3Q9H4B4 646 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 LRIT1Q9P2V4 623 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF107Q9UII5 783 aaPredicted RBP3.09□□□□□ -1.91
CSMD3-202ENST00000339701 IKZF2Q9UKS7 526 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 CHKBQ9Y259 395 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 KMT2EQ8IZD2 1858 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 A0A1W2PP55 124 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 TERTO14746 1132 aaKnown RBP3.09□□□□□ -1.91
CSMD3-202ENST00000339701 TK1P04183 234 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 AGTR2P50052 363 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 ATP5IP56385 69 aaPredicted RBP3.09□□□□□ -1.91
CSMD3-202ENST00000339701 NDUFA6P56556 154 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 OR10A3P58181 314 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 RPS14P62263 151 aaKnown RBP3.09□□□□□ -1.91
CSMD3-202ENST00000339701 TBCEQ15813 527 aaPredicted RBP3.09□□□□□ -1.91
CSMD3-202ENST00000339701 CTF1Q16619 201 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 FRG2Q64ET8 278 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 DEGS2Q6QHC5 323 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 PDZD3Q86UT5 571 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 ASB11Q8WXH4 323 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 NACC2Q96BF6 587 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 TBC1D20Q96BZ9 403 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 FRG2BQ96QU4 278 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 SNX15Q9NRS6 342 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 OBP2AQ9NY56 170 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 PCDHA9Q9Y5H5 950 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 KCNU1A8MYU2 1149 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 SLITRK3O94933 977 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 TYRP1P17643 537 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 NTF3P20783 257 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 NR0B1P51843 470 aaKnown RBP3.09□□□□□ -1.91
CSMD3-202ENST00000339701 DHODHQ02127 395 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 ENPP2Q13822 863 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 ERV3-1Q14264 604 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 RBMS2Q15434 407 aaKnown RBP3.09□□□□□ -1.91
CSMD3-202ENST00000339701 DPYSL2Q16555 572 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 CLEC12BQ2HXU8 276 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF687Q8N1G0 1237 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 OR4F6Q8NGB9 312 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 OR2AP1Q8NGE2 309 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 OR1J1Q8NGS3 322 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 PROKR1Q8TCW9 393 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 PSMG2Q969U7 264 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 RBMXL1Q96E39 390 aaKnown RBP3.09□□□□□ -1.91
CSMD3-202ENST00000339701 TPD52L3Q96J77 140 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 WACQ9BTA9 647 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 FKRPQ9H9S5 495 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 PLEK2Q9NYT0 353 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 VPS29Q9UBQ0 182 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 MOKQ9UQ07 419 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 hCG_1818297A0A087WSY0 165 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 ANKRD20A5PA0PJZ0 165 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 F5H0A9 414 aaPredicted RBP3.09□□□□□ -1.91
CSMD3-202ENST00000339701 CSO75390 466 aaKnown RBP3.09□□□□□ -1.91
CSMD3-202ENST00000339701 AKR1C4P17516 323 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 ITGB5P18084 799 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 HSD11B1P28845 292 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 ADH7P40394 386 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 SRP9P49458 86 aaKnown RBP3.09□□□□□ -1.91
CSMD3-202ENST00000339701 COMPP49747 757 aaPredicted RBP3.09□□□□□ -1.91
CSMD3-202ENST00000339701 HK3P52790 923 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 ARF5P84085 180 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 KLF10Q13118 480 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 ILKQ13418 452 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 ATP6AP1Q15904 470 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 BAK1Q16611 211 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 ACOT6Q3I5F7 207 aaPredicted RBP3.09□□□□□ -1.91
CSMD3-202ENST00000339701 SLC10A6Q3KNW5 377 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 AGBL4Q5VU57 503 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 C17orf107Q6ZR85 190 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 CUZD1Q86UP6 607 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 PTGR2Q8N8N7 351 aaPredicted RBP3.09□□□□□ -1.91
CSMD3-202ENST00000339701 ALG8Q9BVK2 526 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms