RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 NUP62P37198 522 aaPredicted RBP13.14□□□□□ -0.31
PCDH8-201ENST00000338862 PITPNAQ00169 270 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 PON3Q15166 354 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 SLITRK2Q9H156 845 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 ZMAT3Q9HA38 289 aaKnown RBP13.14□□□□□ -0.31
PCDH8-201ENST00000338862 B8ZZF3 427 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 H7C1C5 153 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 PKLRP30613 574 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 LCN6P62502 163 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 PRDX1Q06830 199 aaKnown RBP13.14□□□□□ -0.31
PCDH8-201ENST00000338862 SRSF5Q13243 272 aaKnown RBP13.14□□□□□ -0.31
PCDH8-201ENST00000338862 OR1Q1Q15612 314 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 SFRP5Q5T4F7 317 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 THSD4Q6ZMP0 1018 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 ZNF620Q6ZNG0 422 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 NDUFAF7Q7L592 441 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 GID4Q8IVV7 300 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 PRSS58Q8IYP2 241 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 OR52E1Q8NGJ3 308 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 ELP4Q96EB1 424 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 TEAD3Q99594 435 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 SLC6A17Q9H1V8 727 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 SRMSQ9H3Y6 488 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 SAV1Q9H4B6 383 aaPredicted RBP13.14□□□□□ -0.31
PCDH8-201ENST00000338862 PHPT1Q9NRX4 125 aaPredicted RBP13.14□□□□□ -0.31
PCDH8-201ENST00000338862 POT1Q9NUX5 634 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 ZSWIM8A7E2V4 1837 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 DUXAA6NLW8 204 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 CPMP14384 443 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 NAT1P18440 290 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 ATP5A1P25705 553 aaKnown RBP13.14□□□□□ -0.31
PCDH8-201ENST00000338862 RAD52P43351 418 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 PTH2RP49190 550 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 SELENOPP49908 381 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 FOXK2Q01167 660 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 OPCMLQ14982 345 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 DUSP5Q16690 384 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 TMEM201Q5SNT2 666 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 NR2C2APQ86WQ0 139 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 ZNF676Q8N7Q3 588 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 THEM6Q8WUY1 208 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 ACOT12Q8WYK0 555 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 DVL3Q92997 716 aaPredicted RBP13.14□□□□□ -0.31
PCDH8-201ENST00000338862 ACTRT3Q9BYD9 372 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 SAGE1Q9NXZ1 904 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 PHF11Q9UIL8 331 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 NUBP2Q9Y5Y2 271 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 NPIPB8E9PQR5 432 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 GPR171O14626 319 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 GMDSO60547 372 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 ARL6IP5O75915 188 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 KLHL18O94889 574 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 ATF1P18846 271 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 MAKP20794 623 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 RAB28P51157 221 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 CDK3Q00526 305 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 ZNF234Q14588 700 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 METAP1DQ6UB28 335 aaPredicted RBP13.13□□□□□ -0.31
PCDH8-201ENST00000338862 ENPP7Q6UWV6 458 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 LINC01555Q8NAE3 123 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 OR7G2Q8NG99 324 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 OR4K14Q8NGD5 310 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 OR52I2Q8NH67 350 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 OR5K2Q8NHB8 316 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 TSEN15Q8WW01 171 aaKnown RBP13.13□□□□□ -0.31
PCDH8-201ENST00000338862 TSSK2Q96PF2 358 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.13□□□□□ -0.31
PCDH8-201ENST00000338862 ZNF443Q9Y2A4 671 aaPredicted RBP13.13□□□□□ -0.31
PCDH8-201ENST00000338862 VWA8A3KMH1 1905 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 A0A1B0GVI7 797 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 DRD2P14416 443 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 CEBPBP17676 345 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 RFLNBQ8N5W9 214 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 ZNF511Q8NB15 262 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 RELL2Q8NC24 303 aaPredicted RBP13.13□□□□□ -0.31
PCDH8-201ENST00000338862 LMF1Q96S06 567 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 NOX3Q9HBY0 568 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 NOX4Q9NPH5 578 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 B3GNT2Q9NY97 397 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 FBXL2Q9UKC9 423 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 SLC22A31A6NKX4 558 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 C4BPBP20851 252 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 AKR1C2P52895 323 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 ERVK-25P63136 954 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 AKR1C1Q04828 323 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 C19orf48Q6RUI8 117 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 ZNF627Q7L945 461 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 GJD3Q8N144 294 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 LRRC25Q8N386 305 aaPredicted RBP13.13□□□□□ -0.31
PCDH8-201ENST00000338862 ADAD1Q96M93 576 aaKnown RBP13.13□□□□□ -0.31
PCDH8-201ENST00000338862 HHIPQ96QV1 700 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 ULBP3Q9BZM4 244 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 PCBD2Q9H0N5 130 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 ACSS1Q9NUB1 689 aaPredicted RBP13.13□□□□□ -0.31
PCDH8-201ENST00000338862 SF3B6Q9Y3B4 125 aaKnown RBP13.13□□□□□ -0.31
PCDH8-201ENST00000338862 SPACA6W5XKT8 324 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 DSPPQ9NZW4 1301 aa13.13□□□□□ -0.31
PCDH8-201ENST00000338862 PRKACAP17612 351 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 TYRP1P17643 537 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 CST5P28325 142 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms