RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 PIGMQ9H3S5 423 aa13.67□□□□□ -0.22
PRKN-201ENST00000338468 COQ10BQ9H8M1 238 aa13.67□□□□□ -0.22
PRKN-201ENST00000338468 MTHFD2LQ9H903 347 aaPredicted RBP13.67□□□□□ -0.22
PRKN-201ENST00000338468 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.67□□□□□ -0.22
PRKN-201ENST00000338468 DNAJB12Q9NXW2 375 aaKnown RBP13.67□□□□□ -0.22
PRKN-201ENST00000338468 STOML1Q9UBI4 398 aa13.67□□□□□ -0.22
PRKN-201ENST00000338468 P2RX2Q9UBL9 471 aa13.67□□□□□ -0.22
PRKN-201ENST00000338468 FOXD3Q9UJU5 478 aaPredicted RBP13.67□□□□□ -0.22
PRKN-201ENST00000338468 PACSIN3Q9UKS6 424 aa13.67□□□□□ -0.22
PRKN-201ENST00000338468 HRNRQ86YZ3 2850 aaPredicted RBP13.67□□□□□ -0.22
PRKN-201ENST00000338468 CLIC1O00299 241 aa13.66□□□□□ -0.22
PRKN-201ENST00000338468 BMP2P12643 396 aa13.66□□□□□ -0.22
PRKN-201ENST00000338468 IRX1P78414 480 aaPredicted RBP13.66□□□□□ -0.22
PRKN-201ENST00000338468 RPS26P11Q5JNZ5 115 aaPredicted RBP13.66□□□□□ -0.22
PRKN-201ENST00000338468 HBMQ6B0K9 141 aa13.66□□□□□ -0.22
PRKN-201ENST00000338468 CNEP1R1Q8N9A8 125 aa13.66□□□□□ -0.22
PRKN-201ENST00000338468 ST8SIA1Q92185 356 aa13.66□□□□□ -0.22
PRKN-201ENST00000338468 OSTF1Q92882 214 aa13.66□□□□□ -0.22
PRKN-201ENST00000338468 RBM24Q9BX46 236 aaKnown RBP13.66□□□□□ -0.22
PRKN-201ENST00000338468 IKZF5Q9H5V7 419 aa13.66□□□□□ -0.22
PRKN-201ENST00000338468 EXOSC3Q9NQT5 275 aaKnown RBP13.66□□□□□ -0.22
PRKN-201ENST00000338468 ACER3Q9NUN7 267 aa13.66□□□□□ -0.22
PRKN-201ENST00000338468 PAQR5Q9NXK6 330 aaPredicted RBP13.66□□□□□ -0.22
PRKN-201ENST00000338468 GALNT8Q9NY28 637 aa13.66□□□□□ -0.22
PRKN-201ENST00000338468 CRIM1Q9NZV1 1036 aa13.66□□□□□ -0.22
PRKN-201ENST00000338468 VAPAQ9P0L0 249 aa13.66□□□□□ -0.22
PRKN-201ENST00000338468 GMEB1Q9Y692 573 aa13.66□□□□□ -0.22
PRKN-201ENST00000338468 NAV3Q8IVL0 2385 aa13.66□□□□□ -0.22
PRKN-201ENST00000338468 NIPBLQ6KC79 2804 aaeCLIP13.65□□□□□ -0.22
PRKN-201ENST00000338468 UQCRHLA0A096LP55 91 aa13.65□□□□□ -0.22
PRKN-201ENST00000338468 A0A0G2JND7 137 aa13.65□□□□□ -0.22
PRKN-201ENST00000338468 A0A1W2PP18 115 aa13.65□□□□□ -0.22
PRKN-201ENST00000338468 AP3D1O14617 1153 aa13.65□□□□□ -0.22
PRKN-201ENST00000338468 MSTNO14793 375 aa13.65□□□□□ -0.22
PRKN-201ENST00000338468 BCHEP06276 602 aa13.65□□□□□ -0.22
PRKN-201ENST00000338468 FCGR2AP12318 317 aa13.65□□□□□ -0.22
PRKN-201ENST00000338468 NCF2P19878 526 aaPredicted RBP13.65□□□□□ -0.22
PRKN-201ENST00000338468 PGCP20142 388 aa13.65□□□□□ -0.22
PRKN-201ENST00000338468 KIR2DL3P43628 341 aa13.65□□□□□ -0.22
PRKN-201ENST00000338468 ART1P52961 327 aa13.65□□□□□ -0.22
PRKN-201ENST00000338468 CARD18P57730 90 aa13.65□□□□□ -0.22
PRKN-201ENST00000338468 EEF1A1P68104 462 aaKnown RBP13.65□□□□□ -0.22
PRKN-201ENST00000338468 SIRPAP78324 504 aa13.65□□□□□ -0.22
PRKN-201ENST00000338468 SELENBP1Q13228 472 aa13.65□□□□□ -0.22
PRKN-201ENST00000338468 TMEM176BQ3YBM2 270 aaPredicted RBP13.65□□□□□ -0.22
PRKN-201ENST00000338468 MRPL2Q5T653 305 aaKnown RBP13.65□□□□□ -0.22
PRKN-201ENST00000338468 EEF1A1P5Q5VTE0 462 aa13.65□□□□□ -0.22
PRKN-201ENST00000338468 ZNF474Q6S9Z5 364 aaPredicted RBP13.65□□□□□ -0.22
PRKN-201ENST00000338468 DLEU7Q6UYE1 221 aa13.65□□□□□ -0.22
PRKN-201ENST00000338468 PLEKHM3Q6ZWE6 761 aa13.65□□□□□ -0.22
PRKN-201ENST00000338468 VRK2Q86Y07 508 aa13.65□□□□□ -0.22
PRKN-201ENST00000338468 CMIPQ8IY22 773 aa13.65□□□□□ -0.22
PRKN-201ENST00000338468 ATP6V1C2Q8NEY4 427 aa13.65□□□□□ -0.22
PRKN-201ENST00000338468 WDR60Q8WVS4 1066 aa13.65□□□□□ -0.22
PRKN-201ENST00000338468 PMM1Q92871 262 aa13.65□□□□□ -0.22
PRKN-201ENST00000338468 MAL2Q969L2 176 aa13.65□□□□□ -0.22
PRKN-201ENST00000338468 TMEM19Q96HH6 336 aa13.65□□□□□ -0.22
PRKN-201ENST00000338468 SIKE1Q9BRV8 207 aa13.65□□□□□ -0.22
PRKN-201ENST00000338468 CCDC106Q9BWC9 280 aa13.65□□□□□ -0.22
PRKN-201ENST00000338468 RSPO3Q9BXY4 272 aaPredicted RBP13.65□□□□□ -0.22
PRKN-201ENST00000338468 OPN3Q9H1Y3 402 aaPredicted RBP13.65□□□□□ -0.22
PRKN-201ENST00000338468 CLEC4AQ9UMR7 237 aa13.65□□□□□ -0.22
PRKN-201ENST00000338468 CHST2Q9Y4C5 530 aa13.65□□□□□ -0.22
PRKN-201ENST00000338468 ABCA2Q9BZC7 2435 aa13.65□□□□□ -0.22
PRKN-201ENST00000338468 A0A1W2PNR3 127 aa13.64□□□□□ -0.23
PRKN-201ENST00000338468 SS18L1O75177 396 aaPredicted RBP13.64□□□□□ -0.23
PRKN-201ENST00000338468 DBIP07108 87 aaKnown RBP13.64□□□□□ -0.23
PRKN-201ENST00000338468 KLK2P20151 261 aa13.64□□□□□ -0.23
PRKN-201ENST00000338468 RYKP34925 604 aa13.64□□□□□ -0.23
PRKN-201ENST00000338468 SORDQ00796 357 aa13.64□□□□□ -0.23
PRKN-201ENST00000338468 GUCY1A3Q02108 690 aa13.64□□□□□ -0.23
PRKN-201ENST00000338468 MERTKQ12866 999 aa13.64□□□□□ -0.23
PRKN-201ENST00000338468 FADDQ13158 208 aa13.64□□□□□ -0.23
PRKN-201ENST00000338468 MYBPHQ13203 477 aa13.64□□□□□ -0.23
PRKN-201ENST00000338468 ZNF239Q16600 458 aaKnown RBP13.64□□□□□ -0.23
PRKN-201ENST00000338468 PPP4R4Q6NUP7 873 aa13.64□□□□□ -0.23
PRKN-201ENST00000338468 FAM214BQ7L5A3 538 aa13.64□□□□□ -0.23
PRKN-201ENST00000338468 RETREG3Q86VR2 466 aa13.64□□□□□ -0.23
PRKN-201ENST00000338468 ZZZ3Q8IYH5 903 aa13.64□□□□□ -0.23
PRKN-201ENST00000338468 ARFGAP2Q8N6H7 521 aa13.64□□□□□ -0.23
PRKN-201ENST00000338468 OR52P1PQ8NH57 321 aa13.64□□□□□ -0.23
PRKN-201ENST00000338468 LINC01560Q8TB33 94 aa13.64□□□□□ -0.23
PRKN-201ENST00000338468 ROBO4Q8WZ75 1007 aa13.64□□□□□ -0.23
PRKN-201ENST00000338468 LRRC46Q96FV0 321 aa13.64□□□□□ -0.23
PRKN-201ENST00000338468 ZNF559Q9BR84 538 aa13.64□□□□□ -0.23
PRKN-201ENST00000338468 TMEM120AQ9BXJ8 343 aa13.64□□□□□ -0.23
PRKN-201ENST00000338468 CCDC134Q9H6E4 229 aa13.64□□□□□ -0.23
PRKN-201ENST00000338468 SLC24A3Q9HC58 644 aa13.64□□□□□ -0.23
PRKN-201ENST00000338468 A4GALTQ9NPC4 353 aa13.64□□□□□ -0.23
PRKN-201ENST00000338468 FGFR1OP2Q9NVK5 253 aa13.64□□□□□ -0.23
PRKN-201ENST00000338468 RLIMQ9NVW2 624 aa13.64□□□□□ -0.23
PRKN-201ENST00000338468 THUMPD1Q9NXG2 353 aaKnown RBP13.64□□□□□ -0.23
PRKN-201ENST00000338468 MCTS1Q9ULC4 181 aaKnown RBP13.64□□□□□ -0.23
PRKN-201ENST00000338468 SPG11Q96JI7 2443 aa13.63□□□□□ -0.23
PRKN-201ENST00000338468 FAM221AA4D161 298 aa13.63□□□□□ -0.23
PRKN-201ENST00000338468 CDHR4A6H8M9 788 aa13.63□□□□□ -0.23
PRKN-201ENST00000338468 GJE1A6NN92 205 aa13.63□□□□□ -0.23
PRKN-201ENST00000338468 SMNDC1O75940 238 aaKnown RBP eCLIP13.63□□□□□ -0.231e-18■■■■■ 66.9
PRKN-201ENST00000338468 SYNGR4O95473 234 aa13.63□□□□□ -0.23
PRKN-201ENST00000338468 CD8BP10966 210 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms