RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 TMEM43Q9BTV4 400 aa9.4□□□□□ -0.91
HIF1A-202ENST00000337138 JAM3Q9BX67 310 aa9.4□□□□□ -0.91
HIF1A-202ENST00000337138 SLC25A18Q9H1K4 315 aa9.4□□□□□ -0.91
HIF1A-202ENST00000337138 CLDND1Q9NY35 253 aa9.4□□□□□ -0.91
HIF1A-202ENST00000337138 NLGN3Q9NZ94 848 aa9.4□□□□□ -0.91
HIF1A-202ENST00000337138 CEP250Q9BV73 2442 aa9.4□□□□□ -0.91
HIF1A-202ENST00000337138 ABHD14A-ACY1A0A1B0GW23 586 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 TFPIP10646 304 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 NDUFV2P19404 249 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 RPL4P36578 427 aaKnown RBP9.39□□□□□ -0.91
HIF1A-202ENST00000337138 NUDT1P36639 197 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 SNRPNP63162 240 aaKnown RBP9.39□□□□□ -0.91
HIF1A-202ENST00000337138 CSNK1G2P78368 415 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 SCRN3Q0VDG4 424 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 NDUFA9Q16795 377 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 OTPQ5XKR4 325 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 FAAP20Q6NZ36 180 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 LRRN1Q6UXK5 716 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 CDK20Q8IZL9 346 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 LINC01555Q8NAE3 123 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 OR13C2Q8NGS9 318 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 OR8K3Q8NH51 312 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 FANK1Q8TC84 345 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 OSTF1Q92882 214 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 FBXW5Q969U6 566 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 RNF32Q9H0A6 362 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 MBNL1Q9NR56 388 aaKnown RBP9.39□□□□□ -0.91
HIF1A-202ENST00000337138 SLC39A1Q9NY26 324 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 SPHK1Q9NYA1 384 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 FLVCR2Q9UPI3 526 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 PRUNE2Q8WUY3 3088 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 CENPVL1A0A0U1RR11 272 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 A0A1W2PP55 124 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 PRKNO60260 465 aaPredicted RBP9.39□□□□□ -0.91
HIF1A-202ENST00000337138 FMO6PO60774 539 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 LDB3O75112 727 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 SIX6O95475 246 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 F8A1P23610 371 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 AGFG1P52594 562 aaKnown RBP9.39□□□□□ -0.91
HIF1A-202ENST00000337138 GMFBP60983 142 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 LCTLQ6UWM7 567 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 SHISA5Q8N114 240 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 POGLUT1Q8NBL1 392 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 OR5W2Q8NH69 310 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 SETD7Q8WTS6 366 aaKnown RBP9.39□□□□□ -0.91
HIF1A-202ENST00000337138 MED18Q9BUE0 208 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 MS4A7Q9GZW8 240 aaPredicted RBP9.39□□□□□ -0.91
HIF1A-202ENST00000337138 ZBP1Q9H171 429 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 OR52A5Q9H2C5 316 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 MKL2Q9ULH7 1088 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 COPS3Q9UNS2 423 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 NBASA2RRP1 2371 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 SLC9B1P1A6NJY1 282 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 TOR1AO14656 332 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 SLC9A3R1O14745 358 aaPredicted RBP9.39□□□□□ -0.91
HIF1A-202ENST00000337138 CXCL3P19876 107 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 SGCGQ13326 291 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 TPBGQ13641 420 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 PGGHGQ32M88 737 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 HES5Q5TA89 166 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 C1orf94Q6P1W5 598 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 OR14C36Q8NHC7 312 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 ZC3HAV1LQ96H79 300 aaKnown RBP9.39□□□□□ -0.91
HIF1A-202ENST00000337138 COX14Q96I36 57 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 OR52D1Q9H346 318 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.39□□□□□ -0.91
HIF1A-202ENST00000337138 MED11Q9P086 117 aa9.39□□□□□ -0.91
HIF1A-202ENST00000337138 RNF13O43567 381 aa9.38□□□□□ -0.91
HIF1A-202ENST00000337138 CDC123O75794 336 aaPredicted RBP9.38□□□□□ -0.91
HIF1A-202ENST00000337138 RGS11O94810 467 aa9.38□□□□□ -0.91
HIF1A-202ENST00000337138 PPP1R3DO95685 299 aa9.38□□□□□ -0.91
HIF1A-202ENST00000337138 TFP02787 698 aa9.38□□□□□ -0.91
HIF1A-202ENST00000337138 HIST1H1TP22492 207 aaPredicted RBP9.38□□□□□ -0.91
HIF1A-202ENST00000337138 ITGB8P26012 769 aa9.38□□□□□ -0.91
HIF1A-202ENST00000337138 SOX2P48431 317 aa9.38□□□□□ -0.91
HIF1A-202ENST00000337138 TPMTP51580 245 aa9.38□□□□□ -0.91
HIF1A-202ENST00000337138 DGCR2P98153 550 aa9.38□□□□□ -0.91
HIF1A-202ENST00000337138 TSPAN31Q12999 210 aa9.38□□□□□ -0.91
HIF1A-202ENST00000337138 ZNF234Q14588 700 aa9.38□□□□□ -0.91
HIF1A-202ENST00000337138 SWI5Q1ZZU3 235 aa9.38□□□□□ -0.91
HIF1A-202ENST00000337138 HAGHLQ6PII5 290 aaPredicted RBP9.38□□□□□ -0.91
HIF1A-202ENST00000337138 POMZP3Q6PJE2 187 aa9.38□□□□□ -0.91
HIF1A-202ENST00000337138 ZNF322Q6U7Q0 402 aaPredicted RBP9.38□□□□□ -0.91
HIF1A-202ENST00000337138 TEX261Q6UWH6 196 aa9.38□□□□□ -0.91
HIF1A-202ENST00000337138 ERN2Q76MJ5 926 aaKnown RBP9.38□□□□□ -0.91
HIF1A-202ENST00000337138 GDF7Q7Z4P5 450 aa9.38□□□□□ -0.91
HIF1A-202ENST00000337138 SLITRK4Q8IW52 837 aa9.38□□□□□ -0.91
HIF1A-202ENST00000337138 OR4K13Q8NH42 304 aa9.38□□□□□ -0.91
HIF1A-202ENST00000337138 SNX33Q8WV41 574 aa9.38□□□□□ -0.91
HIF1A-202ENST00000337138 OTUB2Q96DC9 234 aa9.38□□□□□ -0.91
HIF1A-202ENST00000337138 PPP1R16AQ96I34 528 aa9.38□□□□□ -0.91
HIF1A-202ENST00000337138 ZNF514Q96K75 400 aaPredicted RBP9.38□□□□□ -0.91
HIF1A-202ENST00000337138 CD180Q99467 661 aa9.38□□□□□ -0.91
HIF1A-202ENST00000337138 UBQLN3Q9H347 655 aa9.38□□□□□ -0.91
HIF1A-202ENST00000337138 FN3KQ9H479 309 aa9.38□□□□□ -0.91
HIF1A-202ENST00000337138 WDR26Q9H7D7 661 aa9.38□□□□□ -0.91
HIF1A-202ENST00000337138 CA5BQ9Y2D0 317 aa9.38□□□□□ -0.91
HIF1A-202ENST00000337138 CACNG2Q9Y698 323 aa9.38□□□□□ -0.91
HIF1A-202ENST00000337138 U3KQ87 197 aa9.38□□□□□ -0.91
HIF1A-202ENST00000337138 LRIT2A6NDA9 550 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms