RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 DNAAF1Q8NEP3 725 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 OR4K2Q8NGD2 314 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 OR2G2Q8NGZ5 317 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 PXYLP1Q8TE99 480 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 ACOT12Q8WYK0 555 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 CASD1Q96PB1 797 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 PKP4Q99569 1192 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 OR51B6Q9H340 312 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 KLHL9Q9P2J3 617 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 ZMYM5Q9UJ78 669 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 FBXL3Q9UKT7 428 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 RUVBL1Q9Y265 456 aaKnown RBP11.03□□□□□ -0.64
SHMT2-201ENST00000328923 NPIPB8E9PQR5 432 aa11.02□□□□□ -0.64
SHMT2-201ENST00000328923 TNFRSF10BO14763 440 aa11.02□□□□□ -0.64
SHMT2-201ENST00000328923 PRKYO43930 277 aa11.02□□□□□ -0.64
SHMT2-201ENST00000328923 CREBL2O60519 120 aaPredicted RBP11.02□□□□□ -0.64
SHMT2-201ENST00000328923 MT-ND4LP03901 98 aa11.02□□□□□ -0.64
SHMT2-201ENST00000328923 ASGR1P07306 291 aa11.02□□□□□ -0.64
SHMT2-201ENST00000328923 NR2F6P10588 404 aa11.02□□□□□ -0.64
SHMT2-201ENST00000328923 PTGER3P43115 390 aa11.02□□□□□ -0.64
SHMT2-201ENST00000328923 SORDQ00796 357 aa11.02□□□□□ -0.64
SHMT2-201ENST00000328923 ZNF235Q14590 738 aa11.02□□□□□ -0.64
SHMT2-201ENST00000328923 DCAF12L2Q5VW00 463 aa11.02□□□□□ -0.64
SHMT2-201ENST00000328923 SLC22A10Q63ZE4 541 aa11.02□□□□□ -0.64
SHMT2-201ENST00000328923 ETFRF1Q6IPR1 90 aa11.02□□□□□ -0.64
SHMT2-201ENST00000328923 DPPA4Q7L190 304 aa11.02□□□□□ -0.64
SHMT2-201ENST00000328923 PRSS45Q7RTY3 260 aa11.02□□□□□ -0.64
SHMT2-201ENST00000328923 OR10D4PQ8NGN7 298 aa11.02□□□□□ -0.64
SHMT2-201ENST00000328923 ZNF461Q8TAF7 563 aa11.02□□□□□ -0.64
SHMT2-201ENST00000328923 ISOC2Q96AB3 205 aa11.02□□□□□ -0.64
SHMT2-201ENST00000328923 AUNIPQ9H7T9 357 aa11.02□□□□□ -0.64
SHMT2-201ENST00000328923 HMX1Q9NP08 348 aaPredicted RBP11.02□□□□□ -0.64
SHMT2-201ENST00000328923 ASF1AQ9Y294 204 aa11.02□□□□□ -0.64
SHMT2-201ENST00000328923 KCNIP3Q9Y2W7 256 aa11.02□□□□□ -0.64
SHMT2-201ENST00000328923 OARD1Q9Y530 152 aa11.02□□□□□ -0.64
SHMT2-201ENST00000328923 MYO16Q9Y6X6 1858 aa11.02□□□□□ -0.65
SHMT2-201ENST00000328923 CLIC1O00299 241 aa11.02□□□□□ -0.65
SHMT2-201ENST00000328923 BCAT2O15382 392 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-201ENST00000328923 SRPRAP08240 638 aaKnown RBP11.02□□□□□ -0.65
SHMT2-201ENST00000328923 HOXB5P09067 269 aa11.02□□□□□ -0.65
SHMT2-201ENST00000328923 RPA2P15927 270 aa11.02□□□□□ -0.65
SHMT2-201ENST00000328923 PSMB1P20618 241 aaKnown RBP11.02□□□□□ -0.65
SHMT2-201ENST00000328923 HOXA5P20719 270 aa11.02□□□□□ -0.65
SHMT2-201ENST00000328923 C5AR1P21730 350 aa11.02□□□□□ -0.65
SHMT2-201ENST00000328923 IGFBP6P24592 240 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-201ENST00000328923 CCND3P30281 292 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-201ENST00000328923 PPM1AP35813 382 aa11.02□□□□□ -0.65
SHMT2-201ENST00000328923 AP3S2P59780 193 aa11.02□□□□□ -0.65
SHMT2-201ENST00000328923 UBE2MP61081 183 aaKnown RBP11.02□□□□□ -0.65
SHMT2-201ENST00000328923 TAP2Q03519 686 aa11.02□□□□□ -0.65
SHMT2-201ENST00000328923 SERINC3Q13530 473 aa11.02□□□□□ -0.65
SHMT2-201ENST00000328923 C18orf21Q32NC0 220 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-201ENST00000328923 TMEM201Q5SNT2 666 aa11.02□□□□□ -0.65
SHMT2-201ENST00000328923 GLT6D1Q7Z4J2 308 aa11.02□□□□□ -0.65
SHMT2-201ENST00000328923 ZNF227Q86WZ6 799 aa11.02□□□□□ -0.65
SHMT2-201ENST00000328923 CPEB3Q8NE35 698 aaKnown RBP11.02□□□□□ -0.65
SHMT2-201ENST00000328923 OR51S1Q8NGJ8 323 aa11.02□□□□□ -0.65
SHMT2-201ENST00000328923 OR56A3Q8NH54 315 aa11.02□□□□□ -0.65
SHMT2-201ENST00000328923 LINC00597Q9H2U6 94 aa11.02□□□□□ -0.65
SHMT2-201ENST00000328923 BCO1Q9HAY6 547 aa11.02□□□□□ -0.65
SHMT2-201ENST00000328923 C1GALT1Q9NS00 363 aa11.02□□□□□ -0.65
SHMT2-201ENST00000328923 UQCC1Q9NVA1 299 aa11.02□□□□□ -0.65
SHMT2-201ENST00000328923 CACNG4Q9UBN1 327 aa11.02□□□□□ -0.65
SHMT2-201ENST00000328923 RASD1Q9Y272 281 aa11.02□□□□□ -0.65
SHMT2-201ENST00000328923 FAM96BQ9Y3D0 163 aa11.02□□□□□ -0.65
SHMT2-201ENST00000328923 PIKFYVEQ9Y2I7 2098 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 A0A1W2PPH5 198 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 TAPBPO15533 448 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 PRAMEF11O60813 436 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 SC5DO75845 299 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 PIRTP0C851 137 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 ACKR3P25106 362 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 MSX1P28360 303 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 THBS2P35442 1172 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 YBEYP58557 167 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-201ENST00000328923 STXBP1P61764 594 aaKnown RBP11.01□□□□□ -0.65
SHMT2-201ENST00000328923 HGFACQ04756 655 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 BIKQ13323 160 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 SF1Q15637 639 aaKnown RBP11.01□□□□□ -0.65
SHMT2-201ENST00000328923 PRPF38BQ5VTL8 546 aaKnown RBP11.01□□□□□ -0.65
SHMT2-201ENST00000328923 ZNF626Q68DY1 528 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 MON1AQ86VX9 555 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 OR4A4PQ8NGN8 299 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 ING5Q8WYH8 240 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 MAL2Q969L2 176 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 RNFT2Q96EX2 444 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 EGFL8Q99944 293 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 ACBD6Q9BR61 282 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 TMEM185BQ9H7F4 350 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 NOX3Q9HBY0 568 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 PRDM7Q9NQW5 492 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 TDP1Q9NUW8 608 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 GAR1Q9NY12 217 aaKnown RBP11.01□□□□□ -0.65
SHMT2-201ENST00000328923 WWOXQ9NZC7 414 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 NLRC5Q86WI3 1866 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 SULT2B1O00204 365 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 GPR182O15218 404 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 RAMP2O60895 175 aa11.01□□□□□ -0.65
SHMT2-201ENST00000328923 CRTAPO75718 401 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-201ENST00000328923 CRHP06850 196 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms