RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 KCTD18Q6PI47 426 aaPredicted RBP6.64□□□□□ -1.35
SMC1A-201ENST00000322213 USP51Q70EK9 711 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 CRYGNQ8WXF5 182 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 MYADMQ96S97 322 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 DUSP21Q9H596 190 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 BCAS3Q9H6U6 928 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 NRIP3Q9NQ35 241 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 YARS2Q9Y2Z4 477 aaKnown RBP6.64□□□□□ -1.35
SMC1A-201ENST00000322213 RNF215Q9Y6U7 377 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 OR5H14A6NHG9 310 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 LRRC72A6NJI9 287 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 SLC9B1P1A6NJY1 282 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 HMGCLP35914 325 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 RANP62826 216 aaKnown RBP6.63□□□□□ -1.35
SMC1A-201ENST00000322213 H3F3AP84243 136 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 CREB5Q02930 508 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 AQP6Q13520 282 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 CCINQ13939 588 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 IL34Q6ZMJ4 242 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 NAA40Q86UY6 237 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 YIPF5Q969M3 257 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 AHCYL2Q96HN2 611 aaKnown RBP6.63□□□□□ -1.35
SMC1A-201ENST00000322213 LRFN5Q96NI6 719 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 DUSP22Q9NRW4 184 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 FCF1Q9Y324 198 aaKnown RBP6.63□□□□□ -1.35
SMC1A-201ENST00000322213 NPIPA5E9PKD4 350 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 POLR2IP36954 125 aaKnown RBP6.63□□□□□ -1.35
SMC1A-201ENST00000322213 CDK3Q00526 305 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 GFOD2Q3B7J2 385 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 ACTBL2Q562R1 376 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 PRAMEF18Q5VWM3 479 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 IL20RBQ6UXL0 311 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 HFE2Q6ZVN8 426 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 SGPP2Q8IWX5 399 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 CPA6Q8N4T0 437 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 C2orf73Q8N5S3 287 aaPredicted RBP6.63□□□□□ -1.35
SMC1A-201ENST00000322213 KIAA1958Q8N8K9 716 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 CCDC71LQ8N9Z2 235 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 ST7LQ8TDW4 575 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 CHTF18Q8WVB6 975 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 SYT17Q9BSW7 474 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 ENKD1Q9H0I2 346 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 TCEAL2Q9H3H9 227 aaPredicted RBP6.63□□□□□ -1.35
SMC1A-201ENST00000322213 GAR1Q9NY12 217 aaKnown RBP6.63□□□□□ -1.35
SMC1A-201ENST00000322213 NPIPA1Q9UND3 350 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 K7EPK0 472 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 KDELR3O43731 214 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 CSTBP04080 98 aaKnown RBP6.63□□□□□ -1.35
SMC1A-201ENST00000322213 HEXBP07686 556 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 SAMD7Q7Z3H4 446 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 OSTM1Q86WC4 334 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 FAM71E2Q8N5Q1 922 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 G6PC3Q9BUM1 346 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 CNIH4Q9P003 139 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 EPHA6Q9UF33 1036 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 WDR45Q9Y484 360 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 PCDHGA5Q9Y5G8 931 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 COL11A2P13942 1736 aaPredicted RBP6.63□□□□□ -1.35
SMC1A-201ENST00000322213 CLDN7O95471 211 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 GLAP06280 429 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 NKPD1Q17RQ9 610 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 ZNF534Q76KX8 674 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 CLDN19Q8N6F1 224 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 RNF128Q8TEB7 428 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 FAM46BQ96A09 425 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 MCHR1Q99705 422 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 MIOXQ9UGB7 285 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 ZNF281Q9Y2X9 895 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 V9GY05 133 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 FAM221BA6H8Z2 402 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 H3BSH0 61 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 MAGEB4O15481 346 aaPredicted RBP6.63□□□□□ -1.35
SMC1A-201ENST00000322213 GPR39O43194 453 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 STBD1O95210 358 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 FGF19O95750 216 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 PRPS1P60891 318 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 ADGRF1Q5T601 910 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 HENMT1Q5T8I9 393 aaKnown RBP6.63□□□□□ -1.35
SMC1A-201ENST00000322213 TTLL10Q6ZVT0 673 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 LRRTM3Q86VH5 581 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 SEMA6DQ8NFY4 1073 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 OR9A1PQ8NGU1 263 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 C1orf123Q9NWV4 160 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 DPP7Q9UHL4 492 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 FAM72CH0Y354 149 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 GPR171O14626 319 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 ERI3O43414 337 aaKnown RBP6.63□□□□□ -1.35
SMC1A-201ENST00000322213 MAP2K6P52564 334 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 TBPL1P62380 186 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 NKX3-2P78367 333 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 LTBQ06643 244 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 CAMK2DQ13557 499 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 SLC5A12Q1EHB4 618 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 NBPF12Q5TAG4 269 aaPredicted RBP6.63□□□□□ -1.35
SMC1A-201ENST00000322213 FAM72AQ5TYM5 149 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 FAM72DQ6L9T8 149 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 FAM72BQ86X60 149 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 OR4F15Q8NGB8 312 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 NUS1Q96E22 293 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 EXOSC3Q9NQT5 275 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms