RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 OR2L5Q8NG80 312 aa14.23□□□□□ -0.13
VARS2-201ENST00000321897 SLC25A46Q96AG3 418 aa14.23□□□□□ -0.13
VARS2-201ENST00000321897 ALG8Q9BVK2 526 aa14.23□□□□□ -0.13
VARS2-201ENST00000321897 TBL1XR1Q9BZK7 514 aa14.23□□□□□ -0.13
VARS2-201ENST00000321897 GSX2Q9BZM3 304 aa14.23□□□□□ -0.13
VARS2-201ENST00000321897 B3GNT4Q9C0J1 378 aa14.23□□□□□ -0.13
VARS2-201ENST00000321897 Q9N2J8 555 aa14.23□□□□□ -0.13
VARS2-201ENST00000321897 REV1Q9UBZ9 1251 aa14.23□□□□□ -0.13
VARS2-201ENST00000321897 HEBP2Q9Y5Z4 205 aa14.23□□□□□ -0.13
VARS2-201ENST00000321897 MED12Q93074 2177 aa14.23□□□□□ -0.13
VARS2-201ENST00000321897 AGPAT2O15120 278 aa14.23□□□□□ -0.13
VARS2-201ENST00000321897 SLC43A1O75387 559 aa14.23□□□□□ -0.13
VARS2-201ENST00000321897 GTF2F2P13984 249 aa14.23□□□□□ -0.13
VARS2-201ENST00000321897 CPMP14384 443 aa14.23□□□□□ -0.13
VARS2-201ENST00000321897 IL12BP29460 328 aa14.23□□□□□ -0.13
VARS2-201ENST00000321897 KRT77Q7Z794 578 aa14.23□□□□□ -0.13
VARS2-201ENST00000321897 LSMEM1Q8N8F7 131 aa14.23□□□□□ -0.13
VARS2-201ENST00000321897 TMEM255BQ8WV15 326 aa14.23□□□□□ -0.13
VARS2-201ENST00000321897 ACOT12Q8WYK0 555 aa14.23□□□□□ -0.13
VARS2-201ENST00000321897 GCDHQ92947 438 aaPredicted RBP14.23□□□□□ -0.13
VARS2-201ENST00000321897 SFXN2Q96NB2 322 aa14.23□□□□□ -0.13
VARS2-201ENST00000321897 TOX2Q96NM4 488 aa14.23□□□□□ -0.13
VARS2-201ENST00000321897 ANK1P16157 1881 aa14.23□□□□□ -0.13
VARS2-201ENST00000321897 TEX51A0A1B0GUA7 166 aa14.23□□□□□ -0.13
VARS2-201ENST00000321897 CDC40O60508 579 aaKnown RBP eCLIP14.23□□□□□ -0.13
VARS2-201ENST00000321897 TNFP01375 233 aa14.23□□□□□ -0.13
VARS2-201ENST00000321897 PCSK2P16519 638 aa14.23□□□□□ -0.13
VARS2-201ENST00000321897 POU3F3P20264 500 aaPredicted RBP14.23□□□□□ -0.13
VARS2-201ENST00000321897 PYHIN1Q6K0P9 492 aa14.23□□□□□ -0.13
VARS2-201ENST00000321897 TCTN3Q6NUS6 607 aa14.23□□□□□ -0.13
VARS2-201ENST00000321897 SSX6Q7RTT6 188 aa14.23□□□□□ -0.13
VARS2-201ENST00000321897 SIAH3Q8IW03 269 aa14.23□□□□□ -0.13
VARS2-201ENST00000321897 FBXL6Q8N531 539 aa14.23□□□□□ -0.13
VARS2-201ENST00000321897 INO80EQ8NBZ0 244 aaPredicted RBP14.23□□□□□ -0.13
VARS2-201ENST00000321897 OR52I1Q8NGK6 324 aa14.23□□□□□ -0.13
VARS2-201ENST00000321897 OR13C2Q8NGS9 318 aa14.23□□□□□ -0.13
VARS2-201ENST00000321897 ZDHHC1Q8WTX9 485 aa14.23□□□□□ -0.13
VARS2-201ENST00000321897 S100A16Q96FQ6 103 aaKnown RBP14.23□□□□□ -0.13
VARS2-201ENST00000321897 DCLRE1CQ96SD1 692 aaKnown RBP14.23□□□□□ -0.13
VARS2-201ENST00000321897 A0A0A6YYJ9 748 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 NRG2O14511 850 aaPredicted RBP14.22□□□□□ -0.13
VARS2-201ENST00000321897 GOSR2O14653 212 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 ADH1BP00325 375 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 DRD2P14416 443 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 C5AR1P21730 350 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 TPMTP51580 245 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 ZNF77Q15935 545 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 FAM27D1Q5T7N8 215 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 Q6ZSR6 202 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 TMPRSS12Q86WS5 348 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 ZNF454Q8N9F8 522 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 TSTD1Q8NFU3 115 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 ZFPM2Q8WW38 1151 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 FCAMRQ8WWV6 532 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 AMDHD1Q96NU7 426 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 ASF1BQ9NVP2 202 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 AP1M2Q9Y6Q5 423 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 MIA3Q5JRA6 1907 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 M0R036 132 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 RLN2P04090 185 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 GAS6Q14393 721 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 SEC23BQ15437 767 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 SSX1Q16384 188 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 PARM1Q6UWI2 310 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 ANKRD53Q8N9V6 530 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 LYSMD1Q96S90 227 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 ZNF436Q9C0F3 470 aaPredicted RBP14.22□□□□□ -0.13
VARS2-201ENST00000321897 MFFQ9GZY8 342 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 SFXN1Q9H9B4 322 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 C1GALT1Q9NS00 363 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 NAALAD2Q9Y3Q0 740 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 KCNE3Q9Y6H6 103 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 RIF1Q5UIP0 2472 aaKnown RBP14.22□□□□□ -0.13
VARS2-201ENST00000321897 TRBV2A0A0J9YWF9 115 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 A0A1B0GV50 99 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 TVP23AA6NH52 213 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 UNC119BA6NIH7 251 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 ELK1P19419 428 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 ATP5A1P25705 553 aaKnown RBP14.22□□□□□ -0.13
VARS2-201ENST00000321897 PDX1P52945 283 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 MC2RQ01718 297 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 HHEXQ03014 270 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 PLK5Q496M5 336 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 TRMT12Q53H54 448 aaKnown RBP14.22□□□□□ -0.13
VARS2-201ENST00000321897 CLVS2Q5SYC1 327 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 APH1BQ8WW43 257 aa14.22□□□□□ -0.13
VARS2-201ENST00000321897 A0A0B4J203 849 aa14.21□□□□□ -0.13
VARS2-201ENST00000321897 A0A1B0GVI7 797 aa14.21□□□□□ -0.13
VARS2-201ENST00000321897 EPHA5P54756 1037 aa14.21□□□□□ -0.13
VARS2-201ENST00000321897 RPE65Q16518 533 aa14.21□□□□□ -0.13
VARS2-201ENST00000321897 YIF1BQ5BJH7 314 aa14.21□□□□□ -0.13
VARS2-201ENST00000321897 ALKBH2Q6NS38 261 aa14.21□□□□□ -0.13
VARS2-201ENST00000321897 ZNF285Q96NJ3 590 aa14.21□□□□□ -0.13
VARS2-201ENST00000321897 ACTRT3Q9BYD9 372 aa14.21□□□□□ -0.13
VARS2-201ENST00000321897 A0A1W2PR48 441 aa14.21□□□□□ -0.13
VARS2-201ENST00000321897 RAF1P04049 648 aa14.21□□□□□ -0.13
VARS2-201ENST00000321897 LIM2P55344 173 aa14.21□□□□□ -0.13
VARS2-201ENST00000321897 FXYD6P3P58550 94 aa14.21□□□□□ -0.13
VARS2-201ENST00000321897 UBE2MP61081 183 aaKnown RBP14.21□□□□□ -0.13
VARS2-201ENST00000321897 CCDC71Q8IV32 467 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms