RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 PRICKLE4Q2TBC4 344 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 GXYLT1Q4G148 440 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 OR4K13Q8NH42 304 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 ZMYND19Q96E35 227 aaPredicted RBP16.1■□□□□ 0.17
COL9A1-201ENST00000320755 SOSTQ9BQB4 213 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 CYR61O00622 381 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 MT-ND5P03915 603 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 EIF4EP06730 217 aaKnown RBP16.1■□□□□ 0.17
COL9A1-201ENST00000320755 KIAA1024LP59773 190 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 CRYZQ08257 329 aaKnown RBP16.1■□□□□ 0.17
COL9A1-201ENST00000320755 ADAM15Q13444 863 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 GALEQ14376 348 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 NDUFA5Q16718 116 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 NDUFAF6Q330K2 333 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 Q5BKY6 102 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 OR4M1Q8NGD0 313 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 SMPDL3BQ92485 455 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 GABRG3Q99928 467 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 CMC2Q9NRP2 79 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 DUSP22Q9NRW4 184 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 DZANK1Q9NVP4 752 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 FLRT3Q9NZU0 649 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 CPNE7Q9UBL6 633 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 ADAM30Q9UKF2 790 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 PCDHGB7Q9Y5F8 929 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 A0A0B4J203 849 aa16.09■□□□□ 0.17
COL9A1-201ENST00000320755 A0A1B0GWA3 101 aa16.09■□□□□ 0.17
COL9A1-201ENST00000320755 HRKO00198 91 aa16.09■□□□□ 0.17
COL9A1-201ENST00000320755 SEC14L5O43304 696 aa16.09■□□□□ 0.17
COL9A1-201ENST00000320755 LYPD3O95274 346 aa16.09■□□□□ 0.17
COL9A1-201ENST00000320755 ALAS2P22557 587 aa16.09■□□□□ 0.17
COL9A1-201ENST00000320755 HNRNPA2B1P22626 353 aaKnown RBP16.09■□□□□ 0.17
COL9A1-201ENST00000320755 NAA10P41227 235 aaPredicted RBP16.09■□□□□ 0.17
COL9A1-201ENST00000320755 ACSM1Q08AH1 577 aa16.09■□□□□ 0.17
COL9A1-201ENST00000320755 TP53I3Q53FA7 332 aa16.09■□□□□ 0.17
COL9A1-201ENST00000320755 SSX6Q7RTT6 188 aa16.09■□□□□ 0.17
COL9A1-201ENST00000320755 SDR9C7Q8NEX9 313 aa16.09■□□□□ 0.17
COL9A1-201ENST00000320755 PEX11GQ96HA9 241 aa16.09■□□□□ 0.17
COL9A1-201ENST00000320755 YIPF2Q9BWQ6 316 aa16.09■□□□□ 0.17
COL9A1-201ENST00000320755 NOX1Q9Y5S8 564 aa16.09■□□□□ 0.17
COL9A1-201ENST00000320755 ATP1B1P05026 303 aa16.09■□□□□ 0.17
COL9A1-201ENST00000320755 SBK2P0C263 348 aa16.09■□□□□ 0.17
COL9A1-201ENST00000320755 CTHP32929 405 aa16.09■□□□□ 0.17
COL9A1-201ENST00000320755 TALDO1P37837 337 aa16.09■□□□□ 0.17
COL9A1-201ENST00000320755 SHHQ15465 462 aa16.09■□□□□ 0.17
COL9A1-201ENST00000320755 SLC25A35Q3KQZ1 300 aa16.09■□□□□ 0.17
COL9A1-201ENST00000320755 SNAP47Q5SQN1 464 aa16.09■□□□□ 0.17
COL9A1-201ENST00000320755 RNF113BQ8IZP6 322 aaKnown RBP16.09■□□□□ 0.17
COL9A1-201ENST00000320755 SLC44A3Q8N4M1 653 aa16.09■□□□□ 0.17
COL9A1-201ENST00000320755 FAM98AQ8NCA5 519 aaKnown RBP16.09■□□□□ 0.17
COL9A1-201ENST00000320755 OR52E2Q8NGJ4 325 aa16.09■□□□□ 0.17
COL9A1-201ENST00000320755 OR5J2Q8NH18 312 aa16.09■□□□□ 0.17
COL9A1-201ENST00000320755 ABHD4Q8TB40 342 aa16.09■□□□□ 0.17
COL9A1-201ENST00000320755 ERMAPQ96PL5 475 aaPredicted RBP16.09■□□□□ 0.17
COL9A1-201ENST00000320755 FN3KQ9H479 309 aa16.09■□□□□ 0.17
COL9A1-201ENST00000320755 GALNT9Q9HCQ5 603 aa16.09■□□□□ 0.17
COL9A1-201ENST00000320755 TRPV5Q9NQA5 729 aa16.09■□□□□ 0.17
COL9A1-201ENST00000320755 SLC22A31A6NKX4 558 aa16.08■□□□□ 0.17
COL9A1-201ENST00000320755 RGS13O14921 159 aa16.08■□□□□ 0.17
COL9A1-201ENST00000320755 EEF1E1O43324 174 aaKnown RBP16.08■□□□□ 0.17
COL9A1-201ENST00000320755 TNFSF14O43557 240 aa16.08■□□□□ 0.17
COL9A1-201ENST00000320755 CPNE3O75131 537 aaKnown RBP16.08■□□□□ 0.17
COL9A1-201ENST00000320755 YES1P07947 543 aa16.08■□□□□ 0.17
COL9A1-201ENST00000320755 TPMTP51580 245 aa16.08■□□□□ 0.17
COL9A1-201ENST00000320755 DLX2Q07687 328 aaPredicted RBP16.08■□□□□ 0.17
COL9A1-201ENST00000320755 ALG10BQ5I7T1 473 aa16.08■□□□□ 0.17
COL9A1-201ENST00000320755 GARNL3Q5VVW2 1013 aa16.08■□□□□ 0.17
COL9A1-201ENST00000320755 MTFR2Q6P444 385 aa16.08■□□□□ 0.17
COL9A1-201ENST00000320755 NKX2-4Q9H2Z4 354 aa16.08■□□□□ 0.17
COL9A1-201ENST00000320755 FAM60AQ9NP50 221 aa16.08■□□□□ 0.17
COL9A1-201ENST00000320755 HCN3Q9P1Z3 774 aa16.08■□□□□ 0.17
COL9A1-201ENST00000320755 A6NCN8 305 aa16.08■□□□□ 0.16
COL9A1-201ENST00000320755 BRINP1O60477 761 aa16.08■□□□□ 0.16
COL9A1-201ENST00000320755 NGFRP08138 427 aa16.08■□□□□ 0.16
COL9A1-201ENST00000320755 SNRPD2P62316 118 aaKnown RBP16.08■□□□□ 0.16
COL9A1-201ENST00000320755 TMEM92Q6UXU6 159 aa16.08■□□□□ 0.16
COL9A1-201ENST00000320755 LRRC17Q8N6Y2 441 aa16.08■□□□□ 0.16
COL9A1-201ENST00000320755 DNAJC5GQ8N7S2 189 aa16.08■□□□□ 0.16
COL9A1-201ENST00000320755 OR13H1Q8NG92 308 aa16.08■□□□□ 0.16
COL9A1-201ENST00000320755 NDEL1Q9GZM8 345 aa16.08■□□□□ 0.16
COL9A1-201ENST00000320755 MCUBQ9NWR8 336 aa16.08■□□□□ 0.16
COL9A1-201ENST00000320755 ZMIZ1Q9ULJ6 1067 aa16.08■□□□□ 0.16
COL9A1-201ENST00000320755 SLC35A3Q9Y2D2 325 aa16.08■□□□□ 0.16
COL9A1-201ENST00000320755 C2orf74A8MZ97 194 aa16.08■□□□□ 0.16
COL9A1-201ENST00000320755 ZNF3P17036 446 aa16.08■□□□□ 0.16
COL9A1-201ENST00000320755 SRP9P49458 86 aaKnown RBP16.08■□□□□ 0.16
COL9A1-201ENST00000320755 MGAT2Q10469 447 aa16.08■□□□□ 0.16
COL9A1-201ENST00000320755 CA13Q8N1Q1 262 aa16.08■□□□□ 0.16
COL9A1-201ENST00000320755 BAHD1Q8TBE0 780 aaPredicted RBP16.08■□□□□ 0.16
COL9A1-201ENST00000320755 HMGB4Q8WW32 186 aa16.08■□□□□ 0.16
COL9A1-201ENST00000320755 GHSRQ92847 366 aa16.08■□□□□ 0.16
COL9A1-201ENST00000320755 PCOLCE2Q9UKZ9 415 aa16.08■□□□□ 0.16
COL9A1-201ENST00000320755 INMT-MINDY4F8WBC2 141 aa16.07■□□□□ 0.16
COL9A1-201ENST00000320755 GALR3O60755 368 aaPredicted RBP16.07■□□□□ 0.16
COL9A1-201ENST00000320755 RPS4Y1P22090 263 aaKnown RBP16.07■□□□□ 0.16
COL9A1-201ENST00000320755 MTNR1BP49286 362 aa16.07■□□□□ 0.16
COL9A1-201ENST00000320755 SFXN4Q6P4A7 337 aa16.07■□□□□ 0.16
COL9A1-201ENST00000320755 TMPRSS11FQ6ZWK6 438 aa16.07■□□□□ 0.16
COL9A1-201ENST00000320755 TAF8Q7Z7C8 310 aa16.07■□□□□ 0.16
COL9A1-201ENST00000320755 ARID1BQ8NFD5 2236 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 200.5 ms