RNA–Protein interactions for RNA: ENST00000318974.13

PTPN6-201, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTPN6, Length 2,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-201ENST00000318974 CT45A9P0DMV2 189 aa11.65□□□□□ -0.54
PTPN6-201ENST00000318974 PSMA1P25786 263 aaKnown RBP11.65□□□□□ -0.54
PTPN6-201ENST00000318974 ETV6P41212 452 aa11.65□□□□□ -0.54
PTPN6-201ENST00000318974 MLLT11Q13015 90 aaPredicted RBP11.65□□□□□ -0.54
PTPN6-201ENST00000318974 KLHL22Q53GT1 634 aa11.65□□□□□ -0.54
PTPN6-201ENST00000318974 CT45A2Q5DJT8 189 aa11.65□□□□□ -0.54
PTPN6-201ENST00000318974 ACSM5Q6NUN0 579 aa11.65□□□□□ -0.54
PTPN6-201ENST00000318974 SLC27A4Q6P1M0 643 aa11.65□□□□□ -0.54
PTPN6-201ENST00000318974 ANKRD37Q7Z713 158 aa11.65□□□□□ -0.54
PTPN6-201ENST00000318974 SNX29P2Q8IUI4 249 aa11.65□□□□□ -0.54
PTPN6-201ENST00000318974 LRR1Q96L50 414 aa11.65□□□□□ -0.54
PTPN6-201ENST00000318974 TAAR9Q96RI9 348 aa11.65□□□□□ -0.54
PTPN6-201ENST00000318974 CRB3Q9BUF7 120 aa11.65□□□□□ -0.54
PTPN6-201ENST00000318974 PRRG3Q9BZD7 231 aa11.65□□□□□ -0.54
PTPN6-201ENST00000318974 WDR54Q9H977 334 aa11.65□□□□□ -0.54
PTPN6-201ENST00000318974 SIAEQ9HAT2 523 aa11.65□□□□□ -0.54
PTPN6-201ENST00000318974 CTPS2Q9NRF8 586 aa11.65□□□□□ -0.54
PTPN6-201ENST00000318974 MRPS18AQ9NVS2 196 aaKnown RBP11.65□□□□□ -0.54
PTPN6-201ENST00000318974 FBXO34Q9NWN3 711 aa11.65□□□□□ -0.54
PTPN6-201ENST00000318974 COPS7AQ9UBW8 275 aa11.65□□□□□ -0.54
PTPN6-201ENST00000318974 SEC14L4Q9UDX3 406 aa11.65□□□□□ -0.54
PTPN6-201ENST00000318974 PISDQ9UG56 409 aa11.65□□□□□ -0.54
PTPN6-201ENST00000318974 TESQ9UGI8 421 aaKnown RBP11.65□□□□□ -0.54
PTPN6-201ENST00000318974 CLEC2DQ9UHP7 191 aa11.65□□□□□ -0.54
PTPN6-201ENST00000318974 GPR179Q6PRD1 2367 aa11.65□□□□□ -0.54
PTPN6-201ENST00000318974 SCN2AQ99250 2005 aa11.65□□□□□ -0.55
PTPN6-201ENST00000318974 CCDC187A0A096LP49 1063 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 PNMA8CA0A1B0GUJ8 204 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 C9J4A7 227 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 AP3D1O14617 1153 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 GPX5O75715 221 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 GUSBP08236 651 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 CCNYL3P0C7X3 344 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 LSM11P83369 360 aaKnown RBP eCLIP11.64□□□□□ -0.55
PTPN6-201ENST00000318974 EIF3IQ13347 325 aaKnown RBP11.64□□□□□ -0.55
PTPN6-201ENST00000318974 LARS2Q15031 903 aaKnown RBP11.64□□□□□ -0.55
PTPN6-201ENST00000318974 SNAPC1Q16533 368 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 FAM199XQ6PEV8 388 aaPredicted RBP11.64□□□□□ -0.55
PTPN6-201ENST00000318974 ZNF730Q6ZMV8 503 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 RASSF6Q6ZTQ3 369 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 RRM2BQ7LG56 351 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 KIF18BQ86Y91 864 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 DEFB124Q8NES8 71 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 TOR1AIP2Q8NFQ8 470 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 OR4N2Q8NGD1 307 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 OR9Q1Q8NGQ5 310 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 OR1N1Q8NGS0 311 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 ZNF582Q96NG8 517 aaPredicted RBP11.64□□□□□ -0.55
PTPN6-201ENST00000318974 NEURL2Q9BR09 285 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 DDA1Q9BW61 102 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 NUDT9Q9BW91 350 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 SP140LQ9H930 580 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 NDUFB11Q9NX14 153 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 ZNF443Q9Y2A4 671 aaPredicted RBP11.64□□□□□ -0.55
PTPN6-201ENST00000318974 GPR55Q9Y2T6 319 aaPredicted RBP11.64□□□□□ -0.55
PTPN6-201ENST00000318974 OR10H1Q9Y4A9 318 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 CHST2Q9Y4C5 530 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 NUP210LQ5VU65 1888 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 A0A075B6Q4 140 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 BOLA2-SMG1P6H3BVE0 249 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 DBIP07108 87 aaKnown RBP11.64□□□□□ -0.55
PTPN6-201ENST00000318974 THBS1P07996 1170 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 PPICP45877 212 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 RFX3P48380 749 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 RPS3AP61247 264 aaKnown RBP11.64□□□□□ -0.55
PTPN6-201ENST00000318974 DOC2BQ14184 412 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 DECR1Q16698 335 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 HES3Q5TGS1 186 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 FAM198BQ6UWH4 519 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 BCDIN3DQ7Z5W3 292 aaKnown RBP11.64□□□□□ -0.55
PTPN6-201ENST00000318974 LYSMD2Q8IV50 215 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 GALNT6Q8NCL4 622 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 OR52I1Q8NGK6 324 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 PIGXQ8TBF5 258 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 TMEM163Q8TC26 289 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 SLC38A2Q96QD8 506 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 PLA2G12AQ9BZM1 189 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 POLR2J2Q9GZM3 115 aaKnown RBP11.64□□□□□ -0.55
PTPN6-201ENST00000318974 C19orf25Q9UFG5 118 aaPredicted RBP11.64□□□□□ -0.55
PTPN6-201ENST00000318974 CBLCQ9ULV8 474 aa11.64□□□□□ -0.55
PTPN6-201ENST00000318974 IGHV3-20A0A0C4DH32 117 aa11.63□□□□□ -0.55
PTPN6-201ENST00000318974 OR6C76A6NM76 312 aa11.63□□□□□ -0.55
PTPN6-201ENST00000318974 CPSF4LA6NMK7 179 aaKnown RBP11.63□□□□□ -0.55
PTPN6-201ENST00000318974 PLD2O14939 933 aa11.63□□□□□ -0.55
PTPN6-201ENST00000318974 PRODHO43272 600 aa11.63□□□□□ -0.55
PTPN6-201ENST00000318974 STK17BO94768 372 aa11.63□□□□□ -0.55
PTPN6-201ENST00000318974 OR5F1O95221 314 aa11.63□□□□□ -0.55
PTPN6-201ENST00000318974 RPS4Y1P22090 263 aaKnown RBP11.63□□□□□ -0.55
PTPN6-201ENST00000318974 SOX3P41225 446 aa11.63□□□□□ -0.55
PTPN6-201ENST00000318974 OMPP47874 163 aa11.63□□□□□ -0.55
PTPN6-201ENST00000318974 RGS8P57771 180 aaPredicted RBP11.63□□□□□ -0.55
PTPN6-201ENST00000318974 DCAF7P61962 342 aa11.63□□□□□ -0.55
PTPN6-201ENST00000318974 RAB40BQ12829 278 aa11.63□□□□□ -0.55
PTPN6-201ENST00000318974 NNATQ16517 81 aa11.63□□□□□ -0.55
PTPN6-201ENST00000318974 FLYWCH1Q4VC44 716 aa11.63□□□□□ -0.55
PTPN6-201ENST00000318974 C3orf38Q5JPI3 329 aa11.63□□□□□ -0.55
PTPN6-201ENST00000318974 TMEM205Q6UW68 189 aa11.63□□□□□ -0.55
PTPN6-201ENST00000318974 ZNF517Q6ZMY9 492 aaPredicted RBP11.63□□□□□ -0.55
PTPN6-201ENST00000318974 CLIP4Q8N3C7 705 aa11.63□□□□□ -0.55
PTPN6-201ENST00000318974 ACOT11Q8WXI4 607 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms