RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 AAGABQ6PD74 315 aa13.99□□□□□ -0.17
PDLIM5-202ENST00000318007 IGFL2Q6UWQ7 119 aa13.99□□□□□ -0.17
PDLIM5-202ENST00000318007 WDR88Q6ZMY6 472 aa13.99□□□□□ -0.17
PDLIM5-202ENST00000318007 ASB18Q6ZVZ8 466 aa13.99□□□□□ -0.17
PDLIM5-202ENST00000318007 GDF7Q7Z4P5 450 aa13.99□□□□□ -0.17
PDLIM5-202ENST00000318007 GPR119Q8TDV5 335 aa13.99□□□□□ -0.17
PDLIM5-202ENST00000318007 TM9SF4Q92544 642 aa13.99□□□□□ -0.17
PDLIM5-202ENST00000318007 DUS3LQ96G46 650 aaKnown RBP13.99□□□□□ -0.17
PDLIM5-202ENST00000318007 FAM173AQ9BQD7 235 aa13.99□□□□□ -0.17
PDLIM5-202ENST00000318007 TTTY12Q9BZ98 90 aa13.99□□□□□ -0.17
PDLIM5-202ENST00000318007 REEP1Q9H902 201 aa13.99□□□□□ -0.17
PDLIM5-202ENST00000318007 RNPEPL1Q9HAU8 725 aa13.99□□□□□ -0.17
PDLIM5-202ENST00000318007 NTN4Q9HB63 628 aa13.99□□□□□ -0.17
PDLIM5-202ENST00000318007 MED17Q9NVC6 651 aa13.99□□□□□ -0.17
PDLIM5-202ENST00000318007 TAS2R10Q9NYW0 307 aa13.99□□□□□ -0.17
PDLIM5-202ENST00000318007 TNFRSF10DQ9UBN6 386 aa13.99□□□□□ -0.17
PDLIM5-202ENST00000318007 OAZ3Q9UMX2 235 aa13.99□□□□□ -0.17
PDLIM5-202ENST00000318007 USP24Q9UPU5 2620 aa13.99□□□□□ -0.17
PDLIM5-202ENST00000318007 KALRNO60229 2985 aa13.99□□□□□ -0.17
PDLIM5-202ENST00000318007 TMEM8BA6NDV4 472 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 TNFRSF11BO00300 401 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 TRIM3O75382 744 aaPredicted RBP13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 PRSS23O95084 383 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 PGCP20142 388 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 IL11P20809 199 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 DPP4P27487 766 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 TACR3P29371 465 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 TRIP10Q15642 601 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 EXOC3L2Q2M3D2 409 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 NADK2Q4G0N4 442 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 RAET1LQ5VY80 246 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 UBL7Q96S82 380 aaPredicted RBP13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 ZNF559Q9BR84 538 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 RNF32Q9H0A6 362 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 PTGES2Q9H7Z7 377 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 EXOSC3Q9NQT5 275 aaKnown RBP13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 KLF13Q9Y2Y9 288 aaPredicted RBP13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 ATRXP46100 2492 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 ANKRD33BA6NCL7 494 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 ANKUB1A6NFN9 424 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 H3BML4 177 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 ZNHIT1O43257 154 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 PIP5K1CO60331 668 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 DEAF1O75398 565 aaPredicted RBP13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 H1F0P07305 194 aaKnown RBP13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 POU2F1P14859 743 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 UQCRBP14927 111 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 PEX2P28328 305 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 FOXO1Q12778 655 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 MERTKQ12866 999 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 SEC23BQ15437 767 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 ATP6AP1Q15904 470 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 RBMXL3Q8N7X1 1067 aaKnown RBP13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 TMEM178AQ8NBL3 297 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 OR9Q2Q8NGE9 314 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 SLC7A13Q8TCU3 470 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 SMPDL3BQ92485 455 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 C1GALT1C1Q96EU7 318 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 ZNF347Q96SE7 839 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 ZFP64Q9NPA5 681 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 MAN2C1Q9NTJ4 1040 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 LYVE1Q9Y5Y7 322 aa13.98□□□□□ -0.17
PDLIM5-202ENST00000318007 FREM3P0C091 2139 aa13.97□□□□□ -0.17
PDLIM5-202ENST00000318007 A0A0B4J2E0 115 aa13.97□□□□□ -0.17
PDLIM5-202ENST00000318007 A0A1B0GX12 115 aa13.97□□□□□ -0.17
PDLIM5-202ENST00000318007 TRAPPC13A5PLN9 417 aa13.97□□□□□ -0.17
PDLIM5-202ENST00000318007 KLRC4-KLRK1H3BQV0 150 aa13.97□□□□□ -0.17
PDLIM5-202ENST00000318007 PRKCAP17252 672 aa13.97□□□□□ -0.17
PDLIM5-202ENST00000318007 IL1RL1Q01638 556 aa13.97□□□□□ -0.17
PDLIM5-202ENST00000318007 RNFT1Q5M7Z0 435 aa13.97□□□□□ -0.17
PDLIM5-202ENST00000318007 WIPI1Q5MNZ9 446 aaPredicted RBP13.97□□□□□ -0.17
PDLIM5-202ENST00000318007 WBP2NLQ6ICG8 309 aa13.97□□□□□ -0.17
PDLIM5-202ENST00000318007 PIWIL3Q7Z3Z3 882 aaKnown RBP13.97□□□□□ -0.17
PDLIM5-202ENST00000318007 ZNF605Q86T29 641 aa13.97□□□□□ -0.17
PDLIM5-202ENST00000318007 ZNF440Q8IYI8 595 aa13.97□□□□□ -0.17
PDLIM5-202ENST00000318007 FADS6Q8N9I5 356 aa13.97□□□□□ -0.17
PDLIM5-202ENST00000318007 OR14L1PQ8NHC6 308 aa13.97□□□□□ -0.17
PDLIM5-202ENST00000318007 C3orf49Q96BT1 292 aa13.97□□□□□ -0.17
PDLIM5-202ENST00000318007 TMEM41AQ96HV5 264 aa13.97□□□□□ -0.17
PDLIM5-202ENST00000318007 FRMD6Q96NE9 622 aa13.97□□□□□ -0.17
PDLIM5-202ENST00000318007 BDH2Q9BUT1 245 aa13.97□□□□□ -0.17
PDLIM5-202ENST00000318007 ACER3Q9NUN7 267 aa13.97□□□□□ -0.17
PDLIM5-202ENST00000318007 SELENONQ9NZV5 590 aa13.97□□□□□ -0.17
PDLIM5-202ENST00000318007 STX18Q9P2W9 335 aaKnown RBP13.97□□□□□ -0.17
PDLIM5-202ENST00000318007 DNAJB9Q9UBS3 223 aa13.97□□□□□ -0.17
PDLIM5-202ENST00000318007 BOKQ9UMX3 212 aaPredicted RBP13.97□□□□□ -0.17
PDLIM5-202ENST00000318007 RELNP78509 3460 aa13.97□□□□□ -0.17
PDLIM5-202ENST00000318007 TRAV17A0A0B4J275 112 aa13.96□□□□□ -0.17
PDLIM5-202ENST00000318007 ADAMDEC1O15204 470 aa13.96□□□□□ -0.17
PDLIM5-202ENST00000318007 ITGB2P05107 769 aa13.96□□□□□ -0.17
PDLIM5-202ENST00000318007 FCGR1AP12314 374 aa13.96□□□□□ -0.17
PDLIM5-202ENST00000318007 GP1BBP13224 206 aa13.96□□□□□ -0.17
PDLIM5-202ENST00000318007 HK1P19367 917 aa13.96□□□□□ -0.17
PDLIM5-202ENST00000318007 CBLP22681 906 aa13.96□□□□□ -0.17
PDLIM5-202ENST00000318007 ELAVL4P26378 380 aaKnown RBP13.96□□□□□ -0.17
PDLIM5-202ENST00000318007 SLC6A8P48029 635 aa13.96□□□□□ -0.17
PDLIM5-202ENST00000318007 ST3GAL3Q11203 375 aa13.96□□□□□ -0.17
PDLIM5-202ENST00000318007 LY6DQ14210 128 aa13.96□□□□□ -0.17
PDLIM5-202ENST00000318007 ZNF169Q14929 603 aaPredicted RBP13.96□□□□□ -0.17
PDLIM5-202ENST00000318007 PLPPR5Q32ZL2 321 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms