RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 DCDC2BA2VCK2 349 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 HSD17B7P56937 341 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 RAB11BQ15907 218 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 COL13A1Q5TAT6 717 aaPredicted RBP12.59□□□□□ -0.39
RFFL-201ENST00000315249 C3P1Q6ZMU1 363 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 SLCO4C1Q6ZQN7 724 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 PDSS2Q86YH6 399 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 GALNT15Q8N3T1 639 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 POGLUT1Q8NBL1 392 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 TMEM30AQ9NV96 361 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 MMACHCQ9Y4U1 282 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 NUP214P35658 2090 aaPredicted RBP12.59□□□□□ -0.39
RFFL-201ENST00000315249 DNAJC13O75165 2243 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 HCRTR1O43613 425 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 FBXO45P0C2W1 286 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 PKLRP30613 574 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 SLC19A1P41440 591 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 CEACAM7Q14002 265 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 SPHARQ15513 63 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 TP53I3Q53FA7 332 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 THAP6Q8TBB0 222 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 INTS14Q96SY0 518 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 IL37Q9NZH6 218 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 EXTL2Q9UBQ6 330 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 SDHBP21912 280 aa12.58□□□□□ -0.4
RFFL-201ENST00000315249 TACR3P29371 465 aa12.58□□□□□ -0.4
RFFL-201ENST00000315249 KCTD11Q693B1 232 aa12.58□□□□□ -0.4
RFFL-201ENST00000315249 CCDC36Q8IYA8 594 aa12.58□□□□□ -0.4
RFFL-201ENST00000315249 OR8H1Q8NGG4 311 aa12.58□□□□□ -0.4
RFFL-201ENST00000315249 ZNF566Q969W8 418 aa12.58□□□□□ -0.4
RFFL-201ENST00000315249 NECAB3Q96P71 396 aaPredicted RBP12.58□□□□□ -0.4
RFFL-201ENST00000315249 FAM86C1Q9NVL1 165 aa12.58□□□□□ -0.4
RFFL-201ENST00000315249 THSD7AQ9UPZ6 1657 aa12.58□□□□□ -0.4
RFFL-201ENST00000315249 RFPL3O75679 317 aa12.58□□□□□ -0.4
RFFL-201ENST00000315249 PSPHP78330 225 aa12.58□□□□□ -0.4
RFFL-201ENST00000315249 YRDCQ86U90 279 aaKnown RBP12.58□□□□□ -0.4
RFFL-201ENST00000315249 FAM118AQ9NWS6 357 aa12.58□□□□□ -0.4
RFFL-201ENST00000315249 GPR83Q9NYM4 423 aa12.58□□□□□ -0.4
RFFL-201ENST00000315249 TRIOBPQ9H2D6 2365 aa12.58□□□□□ -0.4
RFFL-201ENST00000315249 METTL12A8MUP2 240 aa12.58□□□□□ -0.4
RFFL-201ENST00000315249 ARSKQ6UWY0 536 aa12.58□□□□□ -0.4
RFFL-201ENST00000315249 ASRGL1Q7L266 308 aa12.58□□□□□ -0.4
RFFL-201ENST00000315249 ZBTB8BQ8NAP8 495 aaPredicted RBP12.58□□□□□ -0.4
RFFL-201ENST00000315249 UCKL1Q9NWZ5 548 aa12.58□□□□□ -0.4
RFFL-201ENST00000315249 KLHL9Q9P2J3 617 aa12.58□□□□□ -0.4
RFFL-201ENST00000315249 SLC1A7O00341 560 aa12.58□□□□□ -0.4
RFFL-201ENST00000315249 RBMXP38159 391 aaKnown RBP12.58□□□□□ -0.4
RFFL-201ENST00000315249 LTC4SQ16873 150 aa12.58□□□□□ -0.4
RFFL-201ENST00000315249 LRRN1Q6UXK5 716 aa12.58□□□□□ -0.4
RFFL-201ENST00000315249 ZNF367Q7RTV3 350 aa12.58□□□□□ -0.4
RFFL-201ENST00000315249 MARCH3Q86UD3 253 aa12.58□□□□□ -0.4
RFFL-201ENST00000315249 AMDHD1Q96NU7 426 aa12.58□□□□□ -0.4
RFFL-201ENST00000315249 VN1R3Q9BXE9 311 aa12.58□□□□□ -0.4
RFFL-201ENST00000315249 MS4A8Q9BY19 250 aa12.58□□□□□ -0.4
RFFL-201ENST00000315249 CRISPLD2Q9H0B8 497 aa12.58□□□□□ -0.4
RFFL-201ENST00000315249 NADK2Q4G0N4 442 aa12.58□□□□□ -0.4
RFFL-201ENST00000315249 MOB3CQ70IA8 216 aa12.58□□□□□ -0.4
RFFL-201ENST00000315249 ATG4BQ9Y4P1 393 aa12.58□□□□□ -0.4
RFFL-201ENST00000315249 CLCA1A8K7I4 914 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 B4GALT3O60512 393 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 LPLP06858 475 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 PITPNBP48739 271 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 DTWD1Q8N5C7 304 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 TBC1D15Q8TC07 691 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 KCNE4Q8WWG9 221 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 FAM46BQ96A09 425 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 FSCN3Q9NQT6 498 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 LUZP4Q9P127 313 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 EDARQ9UNE0 448 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 TDRD15B5MCY1 1934 aaKnown RBP12.57□□□□□ -0.4
RFFL-201ENST00000315249 ASXL3Q9C0F0 2248 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 OTOL1A6NHN0 477 aaPredicted RBP12.57□□□□□ -0.4
RFFL-201ENST00000315249 CTNSO60931 367 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 ST6GAL1P15907 406 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 GABRR1P24046 479 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 UGT8Q16880 541 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 LRRC37A5PQ49AS3 106 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 UBE2UQ5VVX9 321 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 PRAMEF25A6NGN4 478 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 IDSB3KWA1 339 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 LRRN3E7EW58 273 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 CD53P19397 219 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 MAGEA6P43360 314 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 FXYD4P59646 89 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 CPZQ66K79 652 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 DTWD2Q8NBA8 298 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 MYEOVQ96EZ4 313 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 PRRC1Q96M27 445 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 MRPL15Q9P015 296 aaKnown RBP12.57□□□□□ -0.4
RFFL-201ENST00000315249 COPZ2Q9P299 210 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 PCM1Q15154 2024 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 FXYD6-FXYD2A0A087WZ82 144 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 H0YIV9 168 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 ADAP00813 363 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 CTSLP07711 333 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 GFERP55789 205 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 ZBED5Q49AG3 693 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 ZNF773Q6PK81 442 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 MISPQ8IVT2 679 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 TMEM68Q96MH6 324 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms