RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 LRRC17Q8N6Y2 441 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 RNASE11Q8TAA1 199 aaKnown RBP12.68□□□□□ -0.38
DDX54-202ENST00000314045 CD8B2A6NJW9 211 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 P2RX6O15547 441 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 CDK1P06493 297 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 CD8BP10966 210 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 ZNF12P17014 697 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 RPS5P46782 204 aaKnown RBP12.67□□□□□ -0.38
DDX54-202ENST00000314045 STT3AP46977 705 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 RIDAP52758 137 aaKnown RBP12.67□□□□□ -0.38
DDX54-202ENST00000314045 GALK2Q01415 458 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 EMX1Q04741 257 aaPredicted RBP12.67□□□□□ -0.38
DDX54-202ENST00000314045 CBX3Q13185 183 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 ARHGAP11BQ3KRB8 267 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 ZNF836Q6ZNA1 936 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 RASSF6Q6ZTQ3 369 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 MSRB3Q8IXL7 192 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 GPR137CQ8N3F9 429 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 C16orf52Q8NHV5 167 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 TMEM163Q8TC26 289 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 DUS3LQ96G46 650 aaKnown RBP12.67□□□□□ -0.38
DDX54-202ENST00000314045 BCL2L10Q9HD36 194 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 ACER3Q9NUN7 267 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 IGHV1OR21-1A0A087WYE8 117 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 IGHV5-51A0A0C4DH38 117 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 EFEMP2O95967 443 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 F13BP05160 661 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 CCL7P80098 99 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 ZNF425Q6IV72 752 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 ALDH16A1Q8IZ83 802 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 SLC2A12Q8TD20 617 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 TMEM255BQ8WV15 326 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 PITX2Q99697 317 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 SLC30A2Q9BRI3 323 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 ALG8Q9BVK2 526 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 CNOT2Q9NZN8 540 aaKnown RBP12.67□□□□□ -0.38
DDX54-202ENST00000314045 TSC22D4Q9Y3Q8 395 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 A0A087WV62 115 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 TCRBV5S2A0A599 114 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 SERTM1A2A2V5 107 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 PIGAP37287 484 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 CTBP2P56545 445 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 PPP1CAP62136 330 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 PITPNAQ00169 270 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 RAB40BQ12829 278 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 TRAM1Q15629 374 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 ZNF829Q3KNS6 432 aaPredicted RBP12.67□□□□□ -0.38
DDX54-202ENST00000314045 ZNF613Q6PF04 617 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 PIWIL3Q7Z3Z3 882 aaKnown RBP12.67□□□□□ -0.38
DDX54-202ENST00000314045 LRRC37A2A6NM11 1700 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 RALGAPA2Q2PPJ7 1873 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 A6NHS1 94 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 SLC16A6O15403 523 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 TFAP2AP05549 437 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 SLC2A2P11168 524 aaPredicted RBP12.67□□□□□ -0.38
DDX54-202ENST00000314045 MRPL19P49406 292 aaKnown RBP12.67□□□□□ -0.38
DDX54-202ENST00000314045 PRKXP51817 358 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 ARG2P78540 354 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 NFATC3Q12968 1075 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 GUSBP11Q6P575 273 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 ZNF100Q8IYN0 542 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 OR4C15Q8NGM1 316 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 GGHQ92820 318 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 STUB1Q9UNE7 303 aa12.67□□□□□ -0.38
DDX54-202ENST00000314045 G3V3Y1 287 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 PRKNO60260 465 aaPredicted RBP12.66□□□□□ -0.38
DDX54-202ENST00000314045 FOXD2O60548 495 aaPredicted RBP12.66□□□□□ -0.38
DDX54-202ENST00000314045 CRABP1P29762 137 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 PPICP45877 212 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 KDM4DQ6B0I6 523 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 SLC18B1Q6NT16 456 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 TCTN3Q6NUS6 607 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 UTS2BQ765I0 119 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 RPS19BP1Q86WX3 136 aaKnown RBP12.66□□□□□ -0.38
DDX54-202ENST00000314045 CCDC74BQ96LY2 380 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 IER2Q9BTL4 223 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 C2orf42Q9NWW7 574 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 DOCK6Q96HP0 2047 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 A0A1B0GW55 424 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 TVP23AA6NH52 213 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 KCNK2O95069 426 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 THBS1P07996 1170 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 HCKP08631 526 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 DUX4L2P0CJ85 424 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 DUX4L3P0CJ86 424 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 DUX4L4P0CJ87 422 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 DUX4L5P0CJ88 424 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 DUX4L6P0CJ89 424 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 DUX4L7P0CJ90 424 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 SPTBP11277 2137 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 MMP11P24347 488 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 SSR4P51571 173 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 RAB14P61106 215 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 AGERQ15109 404 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 PRAMEF17Q5VTA0 474 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 ASB18Q6ZVZ8 466 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 ZNF627Q7L945 461 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 PRSS41Q7RTY9 318 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 MARCH3Q86UD3 253 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 NKAIN4Q8IVV8 208 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms