RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 PPP2R2AP63151 447 aa13.03□□□□□ -0.32
PPP1CA-201ENST00000312989 KCNJ10P78508 379 aa13.03□□□□□ -0.32
PPP1CA-201ENST00000312989 TXNL4AP83876 142 aaKnown RBP13.03□□□□□ -0.32
PPP1CA-201ENST00000312989 SGCBQ16585 318 aa13.03□□□□□ -0.32
PPP1CA-201ENST00000312989 ATAD3BQ5T9A4 648 aa13.03□□□□□ -0.32
PPP1CA-201ENST00000312989 SLC2A7Q6PXP3 512 aa13.03□□□□□ -0.32
PPP1CA-201ENST00000312989 PLEKHM3Q6ZWE6 761 aa13.03□□□□□ -0.32
PPP1CA-201ENST00000312989 EIF3MQ7L2H7 374 aaKnown RBP13.03□□□□□ -0.32
PPP1CA-201ENST00000312989 MIER2Q8N344 545 aa13.03□□□□□ -0.32
PPP1CA-201ENST00000312989 TRIML2Q8N7C3 387 aa13.03□□□□□ -0.32
PPP1CA-201ENST00000312989 OR6K3Q8NGY3 331 aa13.03□□□□□ -0.32
PPP1CA-201ENST00000312989 LRRC8CQ8TDW0 803 aa13.03□□□□□ -0.32
PPP1CA-201ENST00000312989 ABHD3Q8WU67 409 aa13.03□□□□□ -0.32
PPP1CA-201ENST00000312989 STON2Q8WXE9 905 aa13.03□□□□□ -0.32
PPP1CA-201ENST00000312989 ROBO4Q8WZ75 1007 aa13.03□□□□□ -0.32
PPP1CA-201ENST00000312989 ST8SIA1Q92185 356 aa13.03□□□□□ -0.32
PPP1CA-201ENST00000312989 CCDC28BQ9BUN5 200 aa13.03□□□□□ -0.32
PPP1CA-201ENST00000312989 PLEKHF2Q9H8W4 249 aa13.03□□□□□ -0.32
PPP1CA-201ENST00000312989 TPT1P8Q9HAU6 139 aa13.03□□□□□ -0.32
PPP1CA-201ENST00000312989 ACER3Q9NUN7 267 aa13.03□□□□□ -0.32
PPP1CA-201ENST00000312989 ZNF446Q9NWS9 450 aa13.03□□□□□ -0.32
PPP1CA-201ENST00000312989 SLC35A3Q9Y2D2 325 aa13.03□□□□□ -0.32
PPP1CA-201ENST00000312989 ANKRD17O75179 2603 aaKnown RBP13.02□□□□□ -0.33
PPP1CA-201ENST00000312989 A0A1W2PNR3 127 aa13.02□□□□□ -0.33
PPP1CA-201ENST00000312989 SH3D21A4FU49 640 aa13.02□□□□□ -0.33
PPP1CA-201ENST00000312989 DEFB108AA8MXU0 73 aa13.02□□□□□ -0.33
PPP1CA-201ENST00000312989 AP3D1O14617 1153 aa13.02□□□□□ -0.33
PPP1CA-201ENST00000312989 NUDT7P0C024 238 aa13.02□□□□□ -0.33
PPP1CA-201ENST00000312989 BMP2P12643 396 aa13.02□□□□□ -0.33
PPP1CA-201ENST00000312989 ENPP1P22413 925 aa13.02□□□□□ -0.33
PPP1CA-201ENST00000312989 UGT2B10P36537 528 aa13.02□□□□□ -0.33
PPP1CA-201ENST00000312989 CPA2P48052 419 aa13.02□□□□□ -0.33
PPP1CA-201ENST00000312989 CCR4P51679 360 aa13.02□□□□□ -0.33
PPP1CA-201ENST00000312989 CARD18P57730 90 aa13.02□□□□□ -0.33
PPP1CA-201ENST00000312989 TMEM176BQ3YBM2 270 aaPredicted RBP13.02□□□□□ -0.33
PPP1CA-201ENST00000312989 LRIF1Q5T3J3 769 aa13.02□□□□□ -0.33
PPP1CA-201ENST00000312989 BLOC1S3Q6QNY0 202 aa13.02□□□□□ -0.33
PPP1CA-201ENST00000312989 TMCO5AQ8N6Q1 288 aa13.02□□□□□ -0.33
PPP1CA-201ENST00000312989 WFIKKN1Q96NZ8 548 aa13.02□□□□□ -0.33
PPP1CA-201ENST00000312989 POLDIP3Q9BY77 421 aaKnown RBP13.02□□□□□ -0.33
PPP1CA-201ENST00000312989 SLAMF8Q9P0V8 285 aa13.02□□□□□ -0.33
PPP1CA-201ENST00000312989 MCTS1Q9ULC4 181 aaKnown RBP13.02□□□□□ -0.33
PPP1CA-201ENST00000312989 LIPT1Q9Y234 373 aa13.02□□□□□ -0.33
PPP1CA-201ENST00000312989 GMEB1Q9Y692 573 aa13.02□□□□□ -0.33
PPP1CA-201ENST00000312989 SMAD9O15198 467 aaKnown RBP13.01□□□□□ -0.33
PPP1CA-201ENST00000312989 CYP7B1O75881 506 aa13.01□□□□□ -0.33
PPP1CA-201ENST00000312989 ME2P23368 584 aa13.01□□□□□ -0.33
PPP1CA-201ENST00000312989 EDNRAP25101 427 aa13.01□□□□□ -0.33
PPP1CA-201ENST00000312989 MAGEA8P43361 318 aa13.01□□□□□ -0.33
PPP1CA-201ENST00000312989 AQP5P55064 265 aa13.01□□□□□ -0.33
PPP1CA-201ENST00000312989 GPAT3Q53EU6 434 aa13.01□□□□□ -0.33
PPP1CA-201ENST00000312989 PAGE3Q5JUK9 113 aa13.01□□□□□ -0.33
PPP1CA-201ENST00000312989 C3orf33Q6P1S2 294 aa13.01□□□□□ -0.33
PPP1CA-201ENST00000312989 SPNS3Q6ZMD2 512 aa13.01□□□□□ -0.33
PPP1CA-201ENST00000312989 NUFIP2Q7Z417 695 aaKnown RBP13.01□□□□□ -0.33
PPP1CA-201ENST00000312989 SLC38A5Q8WUX1 472 aa13.01□□□□□ -0.33
PPP1CA-201ENST00000312989 CPNE4Q96A23 557 aaPredicted RBP13.01□□□□□ -0.33
PPP1CA-201ENST00000312989 MAGEB18Q96M61 343 aa13.01□□□□□ -0.33
PPP1CA-201ENST00000312989 CTPS2Q9NRF8 586 aa13.01□□□□□ -0.33
PPP1CA-201ENST00000312989 GLRX2Q9NS18 164 aa13.01□□□□□ -0.33
PPP1CA-201ENST00000312989 INTS9Q9NV88 658 aaKnown RBP13.01□□□□□ -0.33
PPP1CA-201ENST00000312989 ELOVL5Q9NYP7 299 aa13.01□□□□□ -0.33
PPP1CA-201ENST00000312989 STOML1Q9UBI4 398 aa13.01□□□□□ -0.33
PPP1CA-201ENST00000312989 PROCRQ9UNN8 238 aa13.01□□□□□ -0.33
PPP1CA-201ENST00000312989 PCDHB14Q9Y5E9 798 aa13.01□□□□□ -0.33
PPP1CA-201ENST00000312989 TEP1Q99973 2627 aaKnown RBP13□□□□□ -0.33
PPP1CA-201ENST00000312989 FAAHO00519 579 aa13□□□□□ -0.33
PPP1CA-201ENST00000312989 POLR3GO15318 223 aaPredicted RBP13□□□□□ -0.33
PPP1CA-201ENST00000312989 GCM2O75603 506 aaPredicted RBP13□□□□□ -0.33
PPP1CA-201ENST00000312989 GOSR1O95249 250 aa13□□□□□ -0.33
PPP1CA-201ENST00000312989 SYNGR4O95473 234 aa13□□□□□ -0.33
PPP1CA-201ENST00000312989 KRT75O95678 551 aa13□□□□□ -0.33
PPP1CA-201ENST00000312989 THBDP07204 575 aa13□□□□□ -0.33
PPP1CA-201ENST00000312989 PGCP20142 388 aa13□□□□□ -0.33
PPP1CA-201ENST00000312989 IST1P53990 364 aa13□□□□□ -0.33
PPP1CA-201ENST00000312989 RAC3P60763 192 aa13□□□□□ -0.33
PPP1CA-201ENST00000312989 RPS26P11Q5JNZ5 115 aaPredicted RBP13□□□□□ -0.33
PPP1CA-201ENST00000312989 TFAP2EQ6VUC0 442 aa13□□□□□ -0.33
PPP1CA-201ENST00000312989 STAC2Q6ZMT1 411 aa13□□□□□ -0.33
PPP1CA-201ENST00000312989 ADGRG3Q86Y34 549 aa13□□□□□ -0.33
PPP1CA-201ENST00000312989 CMIPQ8IY22 773 aa13□□□□□ -0.33
PPP1CA-201ENST00000312989 ATP6V1C2Q8NEY4 427 aa13□□□□□ -0.33
PPP1CA-201ENST00000312989 ITCHQ96J02 903 aa13□□□□□ -0.33
PPP1CA-201ENST00000312989 PSD2Q9BQI7 771 aa13□□□□□ -0.33
PPP1CA-201ENST00000312989 CXXC4Q9H2H0 198 aa13□□□□□ -0.33
PPP1CA-201ENST00000312989 IKZF5Q9H5V7 419 aa13□□□□□ -0.33
PPP1CA-201ENST00000312989 BCO1Q9HAY6 547 aa13□□□□□ -0.33
PPP1CA-201ENST00000312989 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13□□□□□ -0.33
PPP1CA-201ENST00000312989 RLIMQ9NVW2 624 aa13□□□□□ -0.33
PPP1CA-201ENST00000312989 KLHL28Q9NXS3 571 aa13□□□□□ -0.33
PPP1CA-201ENST00000312989 KLHL13Q9P2N7 655 aa13□□□□□ -0.33
PPP1CA-201ENST00000312989 ST6GALNAC2Q9UJ37 374 aa13□□□□□ -0.33
PPP1CA-201ENST00000312989 A0A096LPI6 279 aa12.99□□□□□ -0.33
PPP1CA-201ENST00000312989 IGHV3-15A0A0B4J1V0 119 aa12.99□□□□□ -0.33
PPP1CA-201ENST00000312989 CDHR4A6H8M9 788 aa12.99□□□□□ -0.33
PPP1CA-201ENST00000312989 EDF1O60869 148 aaKnown RBP12.99□□□□□ -0.33
PPP1CA-201ENST00000312989 POU2F1P14859 743 aa12.99□□□□□ -0.33
PPP1CA-201ENST00000312989 ACAA2P42765 397 aaKnown RBP12.99□□□□□ -0.33
PPP1CA-201ENST00000312989 ATP4BP51164 291 aa12.99□□□□□ -0.33
PPP1CA-201ENST00000312989 MERTKQ12866 999 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms