RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 RANP62826 216 aaKnown RBP8.27□□□□□ -1.08
COL6A5-202ENST00000312481 SH2D5Q6ZV89 423 aa8.27□□□□□ -1.08
COL6A5-202ENST00000312481 SAPCD2Q86UD0 394 aa8.27□□□□□ -1.08
COL6A5-202ENST00000312481 OR13C3Q8NGS6 347 aa8.27□□□□□ -1.08
COL6A5-202ENST00000312481 ZFP90Q8TF47 636 aa8.27□□□□□ -1.08
COL6A5-202ENST00000312481 OR52A5Q9H2C5 316 aa8.27□□□□□ -1.08
COL6A5-202ENST00000312481 B4GALT6Q9UBX8 382 aa8.27□□□□□ -1.08
COL6A5-202ENST00000312481 DOCK7Q96N67 2140 aa8.27□□□□□ -1.08
COL6A5-202ENST00000312481 ZNF878C9JN71 531 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 ARSBP15848 533 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 ISL1P61371 349 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 CSNK2A1P68400 391 aaPredicted RBP8.27□□□□□ -1.09
COL6A5-202ENST00000312481 ZNF267Q14586 743 aaPredicted RBP8.27□□□□□ -1.09
COL6A5-202ENST00000312481 AFMIDQ63HM1 303 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 USP51Q70EK9 711 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 BPHLQ86WA6 291 aaPredicted RBP8.27□□□□□ -1.09
COL6A5-202ENST00000312481 MFSD6LQ8IWD5 586 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 ARL14EPQ8N8R7 260 aaPredicted RBP8.27□□□□□ -1.09
COL6A5-202ENST00000312481 OR4K17Q8NGC6 315 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 PDXPQ96GD0 296 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 TSSK2Q96PF2 358 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 DFFBO76075 338 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 DDNO94850 711 aaPredicted RBP8.27□□□□□ -1.09
COL6A5-202ENST00000312481 HNRNPKP61978 463 aaKnown RBP eCLIP8.27□□□□□ -1.09
COL6A5-202ENST00000312481 LDLRAD1Q5T700 205 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 PGBD2Q6P3X8 592 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 ZNF534Q76KX8 674 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 DPPA2Q7Z7J5 298 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 SERPINA12Q8IW75 414 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 MVB12AQ96EY5 273 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 TMEM41AQ96HV5 264 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 TCEAL2Q9H3H9 227 aaPredicted RBP8.27□□□□□ -1.09
COL6A5-202ENST00000312481 STRAPQ9Y3F4 350 aaKnown RBP8.27□□□□□ -1.09
COL6A5-202ENST00000312481 C2orf92A0A1B0GVN3 265 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 IL5P05113 134 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 ATXN1LP0C7T5 689 aaKnown RBP8.27□□□□□ -1.09
COL6A5-202ENST00000312481 RPL23AP62750 156 aaKnown RBP8.27□□□□□ -1.09
COL6A5-202ENST00000312481 HNRNPA1L2Q32P51 320 aaKnown RBP8.27□□□□□ -1.09
COL6A5-202ENST00000312481 PRSS35Q8N3Z0 413 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 FAM160A2Q8N612 972 aaPredicted RBP8.27□□□□□ -1.09
COL6A5-202ENST00000312481 TEX19Q8NA77 164 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 CLSTN3Q9BQT9 956 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 UBQLN4Q9NRR5 601 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 FER1L5A0AVI2 2057 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 TNFRSF4P43489 277 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 CX3CR1P49238 355 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 LRRC26Q2I0M4 334 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 AKR1C8PQ5T2L2 129 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 NADSYN1Q6IA69 706 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 CCDC71Q8IV32 467 aaPredicted RBP8.27□□□□□ -1.09
COL6A5-202ENST00000312481 LYSMD2Q8IV50 215 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 KLHDC8AQ8IYD2 350 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 LAS2Q8IYD9 372 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 LMLNQ96KR4 655 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 SLC29A1Q99808 456 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 TNKS2Q9H2K2 1166 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 MAN2C1Q9NTJ4 1040 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 GFOD1Q9NXC2 390 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 GALR3O60755 368 aaPredicted RBP8.27□□□□□ -1.09
COL6A5-202ENST00000312481 CRTAPO75718 401 aaPredicted RBP8.27□□□□□ -1.09
COL6A5-202ENST00000312481 AQP8O94778 261 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 POU4F3Q15319 338 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 ZNF529Q6P280 563 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 DPH7Q9BTV6 452 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 DUSP23Q9BVJ7 150 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 PRTFDC1Q9NRG1 225 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 A0A1W2PQ09 198 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 RAD1O60671 282 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 VAMP5O95183 116 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 IGLV3-25P01717 112 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 AK4P27144 223 aaPredicted RBP8.27□□□□□ -1.09
COL6A5-202ENST00000312481 SCGB2B2Q4G0G5 96 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 ELFN2Q5R3F8 820 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 HES5Q5TA89 166 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 HFE2Q6ZVN8 426 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 KRTCAP2Q8N6L1 136 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 TMEM185BQ9H7F4 350 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 CARS2Q9HA77 564 aaKnown RBP8.27□□□□□ -1.09
COL6A5-202ENST00000312481 RAB22AQ9UL26 194 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 RNF215Q9Y6U7 377 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 A0A1W2PPL8 197 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 A0A1W2PS29 197 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 ACOD1A6NK06 481 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 DIRAS1O95057 198 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 RAB3DO95716 219 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 SLC16A8O95907 504 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 HLA-HP01893 362 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 ITGB2P05107 769 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 TYRP1P17643 537 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 RGS19P49795 217 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 TAS2R30P59541 319 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 RPS3AP61247 264 aaKnown RBP8.27□□□□□ -1.09
COL6A5-202ENST00000312481 IL13RA1P78552 427 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 TGFBR3Q03167 851 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 SBSNQ6UWP8 590 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 PTERQ96BW5 349 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 KCNA7Q96RP8 456 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 TRMT61BQ9BVS5 477 aaKnown RBP8.27□□□□□ -1.09
COL6A5-202ENST00000312481 KCNIP1Q9NZI2 227 aa8.27□□□□□ -1.09
COL6A5-202ENST00000312481 LEFTY2O00292 366 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms