RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.55□□□□□ -1.68
CAST-201ENST00000309190 PROSER1Q86XN7 944 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 SNX29P2Q8IUI4 249 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 SCAIQ8N9R8 606 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 CLEC1AQ8NC01 280 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 WDR36Q8NI36 951 aaKnown RBP4.55□□□□□ -1.68
CAST-201ENST00000309190 BBS10Q8TAM1 723 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 SLC2A12Q8TD20 617 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 HSH2DQ96JZ2 352 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 SLC29A3Q9BZD2 475 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 SIAEQ9HAT2 523 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 ZNF346Q9UL40 294 aaKnown RBP4.55□□□□□ -1.68
CAST-201ENST00000309190 NPIPA1Q9UND3 350 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 IFT52Q9Y366 437 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 TP53BP1Q12888 1972 aaPredicted RBP4.55□□□□□ -1.68
CAST-201ENST00000309190 MAST4O15021 2626 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 A6NJY4 79 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 J3KRW8 73 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 SUV39H1O43463 412 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 RAD1O60671 282 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 SRPX2O60687 465 aaPredicted RBP4.55□□□□□ -1.68
CAST-201ENST00000309190 ITGA10O75578 1167 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 ITGB2P05107 769 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 RAP2AP10114 183 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 IL10P22301 178 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 DCTP40126 519 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 DAPP51397 102 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 MVKQ03426 396 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 DMPKQ09013 629 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 ILF2Q12905 390 aaKnown RBP4.55□□□□□ -1.68
CAST-201ENST00000309190 DNASE1L3Q13609 305 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 IL10RAQ13651 578 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 FAM53BQ14153 422 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 SF3B4Q15427 424 aaKnown RBP eCLIP4.55□□□□□ -1.68
CAST-201ENST00000309190 RGNQ15493 299 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 TCTE1Q5JU00 501 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 GCNT6Q5T4J0 391 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 CDCP2Q5VXM1 449 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 ZNF770Q6IQ21 691 aaPredicted RBP4.55□□□□□ -1.68
CAST-201ENST00000309190 SLC48A1Q6P1K1 146 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 ARMC8Q8IUR7 673 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 ZZZ3Q8IYH5 903 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 ZNF619Q8N2I2 560 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 ZNF485Q8NCK3 441 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 C11orf65Q8NCR3 313 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 OR52N2Q8NGI0 321 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 SLC35A4Q96G79 324 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 OR7D2Q96RA2 312 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 GAL3ST1Q99999 423 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 EMC6Q9BV81 110 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 ACOT13Q9NPJ3 140 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 DLL3Q9NYJ7 618 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 KLHL13Q9P2N7 655 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 PILRAQ9UKJ1 303 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 MSRB2Q9Y3D2 182 aa4.55□□□□□ -1.68
CAST-201ENST00000309190 CELSR2Q9HCU4 2923 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 CREG1O75629 220 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 UPK1BO75841 260 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 F13BP05160 661 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 HSMCR30P0CW71 290 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 FCGR1AP12314 374 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 PSMA4P25789 261 aaKnown RBP4.54□□□□□ -1.68
CAST-201ENST00000309190 EPHA2P29317 976 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 CCKBRP32239 447 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 CNR2P34972 360 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 RCVRNP35243 200 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 RBMXP38159 391 aaKnown RBP4.54□□□□□ -1.68
CAST-201ENST00000309190 SOX3P41225 446 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 CAPZA2P47755 286 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 KCNJ5P48544 419 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 TNFRSF17Q02223 184 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 ABHD17BQ5VST6 288 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 RNLSQ5VYX0 342 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 GALNT18Q6P9A2 607 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 PLEKHM3Q6ZWE6 761 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 DNAJC22Q8N4W6 341 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 OR1N1Q8NGS0 311 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 TAMM41Q96BW9 452 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 ST6GAL2Q96JF0 529 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 RADILQ96JH8 1075 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 C5orf34Q96MH7 638 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 SERINC2Q96SA4 455 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 OR51V1Q9H2C8 321 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 POLR1BQ9H9Y6 1135 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 TMEM165Q9HC07 324 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 ATP13A2Q9NQ11 1180 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 PDP1Q9P0J1 537 aaPredicted RBP4.54□□□□□ -1.68
CAST-201ENST00000309190 RPS6KB2Q9UBS0 482 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 ABCG2Q9UNQ0 655 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 ITPR2Q14571 2701 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 FN1P02751 2386 aaKnown RBP4.54□□□□□ -1.68
CAST-201ENST00000309190 FAM220BPB1ANY3 271 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 STMND1H3BQB6 276 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 IGLV3-19P01714 112 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 HLA-DQA2P01906 255 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 TP53P04637 393 aaPredicted RBP4.54□□□□□ -1.68
CAST-201ENST00000309190 FCER2P06734 321 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 CCNOP22674 350 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 RRM2P31350 389 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 GMFBP60983 142 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms