RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 C4orf47A7E2U8 309 aa15.36■□□□□ 0.05
SSH3-201ENST00000308127 GMDSO60547 372 aa15.36■□□□□ 0.05
SSH3-201ENST00000308127 CCL5P13501 91 aa15.36■□□□□ 0.05
SSH3-201ENST00000308127 RAB3BP20337 219 aa15.36■□□□□ 0.05
SSH3-201ENST00000308127 PKLRP30613 574 aa15.36■□□□□ 0.05
SSH3-201ENST00000308127 GALEQ14376 348 aa15.36■□□□□ 0.05
SSH3-201ENST00000308127 LGALSLQ3ZCW2 172 aaPredicted RBP15.36■□□□□ 0.05
SSH3-201ENST00000308127 FAAH2Q6GMR7 532 aa15.36■□□□□ 0.05
SSH3-201ENST00000308127 CHMP1BQ7LBR1 199 aa15.36■□□□□ 0.05
SSH3-201ENST00000308127 VN1R4Q7Z5H5 301 aa15.36■□□□□ 0.05
SSH3-201ENST00000308127 SLC44A3Q8N4M1 653 aa15.36■□□□□ 0.05
SSH3-201ENST00000308127 HDDC3Q8N4P3 179 aa15.36■□□□□ 0.05
SSH3-201ENST00000308127 ZNF433Q8N7K0 673 aaPredicted RBP15.36■□□□□ 0.05
SSH3-201ENST00000308127 OR5T3Q8NGG3 340 aa15.36■□□□□ 0.05
SSH3-201ENST00000308127 RELTQ969Z4 430 aa15.36■□□□□ 0.05
SSH3-201ENST00000308127 BPIFA2Q96DR5 249 aa15.36■□□□□ 0.05
SSH3-201ENST00000308127 SCMH1Q96GD3 660 aa15.36■□□□□ 0.05
SSH3-201ENST00000308127 SDF2Q99470 211 aa15.36■□□□□ 0.05
SSH3-201ENST00000308127 MEPEQ9NQ76 525 aaPredicted RBP15.36■□□□□ 0.05
SSH3-201ENST00000308127 GLTPQ9NZD2 209 aa15.36■□□□□ 0.05
SSH3-201ENST00000308127 MRPS2Q9Y399 296 aaKnown RBP15.36■□□□□ 0.05
SSH3-201ENST00000308127 GXYLT2A0PJZ3 443 aa15.35■□□□□ 0.05
SSH3-201ENST00000308127 P2RX6O15547 441 aa15.35■□□□□ 0.05
SSH3-201ENST00000308127 PRKNO60260 465 aaPredicted RBP15.35■□□□□ 0.05
SSH3-201ENST00000308127 ADAM11O75078 769 aa15.35■□□□□ 0.05
SSH3-201ENST00000308127 GATBO75879 557 aaKnown RBP15.35■□□□□ 0.05
SSH3-201ENST00000308127 OR5F1O95221 314 aa15.35■□□□□ 0.05
SSH3-201ENST00000308127 ANXA3P12429 323 aa15.35■□□□□ 0.05
SSH3-201ENST00000308127 HK1P19367 917 aa15.35■□□□□ 0.05
SSH3-201ENST00000308127 TRA2BP62995 288 aaKnown RBP15.35■□□□□ 0.05
SSH3-201ENST00000308127 RIN1Q13671 783 aa15.35■□□□□ 0.05
SSH3-201ENST00000308127 HYAL4Q2M3T9 481 aa15.35■□□□□ 0.05
SSH3-201ENST00000308127 TMEM35AQ53FP2 167 aa15.35■□□□□ 0.05
SSH3-201ENST00000308127 CCL4L1Q8NHW4 92 aa15.35■□□□□ 0.05
SSH3-201ENST00000308127 ZNRF4Q8WWF5 429 aa15.35■□□□□ 0.05
SSH3-201ENST00000308127 DNAJA3Q96EY1 480 aa15.35■□□□□ 0.05
SSH3-201ENST00000308127 PGLYRP3Q96LB9 341 aa15.35■□□□□ 0.05
SSH3-201ENST00000308127 RBCK1Q9BYM8 510 aa15.35■□□□□ 0.05
SSH3-201ENST00000308127 OR10A4Q9H209 315 aa15.35■□□□□ 0.05
SSH3-201ENST00000308127 ADGRL4Q9HBW9 690 aa15.35■□□□□ 0.05
SSH3-201ENST00000308127 MAFFQ9ULX9 164 aa15.35■□□□□ 0.05
SSH3-201ENST00000308127 SLC9A3R1O14745 358 aaPredicted RBP15.35■□□□□ 0.05
SSH3-201ENST00000308127 SBK2P0C263 348 aa15.35■□□□□ 0.05
SSH3-201ENST00000308127 LAMP2P13473 410 aa15.35■□□□□ 0.05
SSH3-201ENST00000308127 RBMS1P29558 406 aaKnown RBP15.35■□□□□ 0.05
SSH3-201ENST00000308127 MNX1P50219 401 aaPredicted RBP15.35■□□□□ 0.05
SSH3-201ENST00000308127 SEC13P55735 322 aa15.35■□□□□ 0.05
SSH3-201ENST00000308127 SUZ12Q15022 739 aaKnown RBP15.35■□□□□ 0.05
SSH3-201ENST00000308127 FAM78AQ5JUQ0 283 aa15.35■□□□□ 0.05
SSH3-201ENST00000308127 PXDC1Q5TGL8 231 aa15.35■□□□□ 0.05
SSH3-201ENST00000308127 NRROSQ86YC3 692 aa15.35■□□□□ 0.05
SSH3-201ENST00000308127 LRRC25Q8N386 305 aaPredicted RBP15.35■□□□□ 0.05
SSH3-201ENST00000308127 OR2T35Q8NGX2 323 aa15.35■□□□□ 0.05
SSH3-201ENST00000308127 OR10G6Q8NH81 332 aa15.35■□□□□ 0.05
SSH3-201ENST00000308127 LRRC20Q8TCA0 184 aa15.35■□□□□ 0.05
SSH3-201ENST00000308127 LGALS14Q8TCE9 139 aa15.35■□□□□ 0.05
SSH3-201ENST00000308127 ACOT12Q8WYK0 555 aa15.35■□□□□ 0.05
SSH3-201ENST00000308127 METTL17Q9H7H0 456 aaPredicted RBP15.35■□□□□ 0.05
SSH3-201ENST00000308127 HEXA-AS1Q9H8Q6 139 aa15.35■□□□□ 0.05
SSH3-201ENST00000308127 CACYBPQ9HB71 228 aaKnown RBP15.35■□□□□ 0.05
SSH3-201ENST00000308127 CEP290O15078 2479 aa15.35■□□□□ 0.05
SSH3-201ENST00000308127 LOC105371267A0A1B0GV96 52 aa15.34■□□□□ 0.05
SSH3-201ENST00000308127 C1QTNF3-AMACRE9PGA6 284 aa15.34■□□□□ 0.05
SSH3-201ENST00000308127 DNASE1P24855 282 aa15.34■□□□□ 0.05
SSH3-201ENST00000308127 DDX6P26196 483 aaKnown RBP eCLIP15.34■□□□□ 0.05
SSH3-201ENST00000308127 HSD17B2P37059 387 aa15.34■□□□□ 0.05
SSH3-201ENST00000308127 POU6F2P78424 691 aaPredicted RBP15.34■□□□□ 0.05
SSH3-201ENST00000308127 ACSM1Q08AH1 577 aa15.34■□□□□ 0.05
SSH3-201ENST00000308127 EXOSC2Q13868 293 aaKnown RBP15.34■□□□□ 0.05
SSH3-201ENST00000308127 NNATQ16517 81 aa15.34■□□□□ 0.05
SSH3-201ENST00000308127 STPG1Q5TH74 334 aa15.34■□□□□ 0.05
SSH3-201ENST00000308127 LINGO2Q7L985 606 aa15.34■□□□□ 0.05
SSH3-201ENST00000308127 WFIKKN2Q8TEU8 576 aa15.34■□□□□ 0.05
SSH3-201ENST00000308127 NT5DC2Q9H857 520 aa15.34■□□□□ 0.05
SSH3-201ENST00000308127 ERVMER34-1Q9H9K5 563 aa15.34■□□□□ 0.05
SSH3-201ENST00000308127 ACOD1A6NK06 481 aa15.34■□□□□ 0.05
SSH3-201ENST00000308127 ZNF593O00488 134 aaPredicted RBP15.34■□□□□ 0.05
SSH3-201ENST00000308127 F8A1P23610 371 aa15.34■□□□□ 0.05
SSH3-201ENST00000308127 RUNX2Q13950 521 aa15.34■□□□□ 0.05
SSH3-201ENST00000308127 DEFB115Q30KQ5 88 aa15.34■□□□□ 0.05
SSH3-201ENST00000308127 AGBL4Q5VU57 503 aa15.34■□□□□ 0.05
SSH3-201ENST00000308127 OTPQ5XKR4 325 aa15.34■□□□□ 0.05
SSH3-201ENST00000308127 GID4Q8IVV7 300 aa15.34■□□□□ 0.05
SSH3-201ENST00000308127 TMEM52Q8NDY8 209 aa15.34■□□□□ 0.05
SSH3-201ENST00000308127 OR52E2Q8NGJ4 325 aa15.34■□□□□ 0.05
SSH3-201ENST00000308127 C10orf90Q96M02 699 aa15.34■□□□□ 0.05
SSH3-201ENST00000308127 MTHFD2LQ9H903 347 aaPredicted RBP15.34■□□□□ 0.05
SSH3-201ENST00000308127 STARD5Q9NSY2 213 aa15.34■□□□□ 0.05
SSH3-201ENST00000308127 ZNF224Q9NZL3 707 aa15.34■□□□□ 0.05
SSH3-201ENST00000308127 RCE1Q9Y256 329 aa15.34■□□□□ 0.05
SSH3-201ENST00000308127 ADAM18Q9Y3Q7 739 aa15.34■□□□□ 0.05
SSH3-201ENST00000308127 ARHGEF17Q96PE2 2063 aaPredicted RBP15.34■□□□□ 0.05
SSH3-201ENST00000308127 A0A1B0GVT2 93 aa15.34■□□□□ 0.05
SSH3-201ENST00000308127 TRAPPC13A5PLN9 417 aa15.34■□□□□ 0.05
SSH3-201ENST00000308127 GPR171O14626 319 aa15.34■□□□□ 0.05
SSH3-201ENST00000308127 TFP02787 698 aa15.34■□□□□ 0.05
SSH3-201ENST00000308127 RAF1P04049 648 aa15.34■□□□□ 0.05
SSH3-201ENST00000308127 H2AFB2P0C5Z0 115 aa15.34■□□□□ 0.05
SSH3-201ENST00000308127 ZP1P60852 638 aa15.34■□□□□ 0.05
SSH3-201ENST00000308127 NDUFAF6Q330K2 333 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms