RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 NAV2Q8IVL1 2488 aa10.9□□□□□ -0.66
TRIM40-205ENST00000307859 UNC119BA6NIH7 251 aa10.9□□□□□ -0.66
TRIM40-205ENST00000307859 MEN1O00255 615 aa10.9□□□□□ -0.66
TRIM40-205ENST00000307859 SCDO00767 359 aa10.9□□□□□ -0.66
TRIM40-205ENST00000307859 TRMUO75648 421 aaKnown RBP10.9□□□□□ -0.66
TRIM40-205ENST00000307859 STSP08842 583 aa10.9□□□□□ -0.66
TRIM40-205ENST00000307859 IFI30P13284 250 aa10.9□□□□□ -0.66
TRIM40-205ENST00000307859 MAKP20794 623 aa10.9□□□□□ -0.66
TRIM40-205ENST00000307859 PCSK6P29122 969 aa10.9□□□□□ -0.66
TRIM40-205ENST00000307859 C21orf33P30042 268 aaPredicted RBP10.9□□□□□ -0.66
TRIM40-205ENST00000307859 NR0B1P51843 470 aaKnown RBP10.9□□□□□ -0.66
TRIM40-205ENST00000307859 EMP2P54851 167 aa10.9□□□□□ -0.66
TRIM40-205ENST00000307859 ST3GAL4Q11206 333 aa10.9□□□□□ -0.66
TRIM40-205ENST00000307859 SKP2Q13309 424 aa10.9□□□□□ -0.66
TRIM40-205ENST00000307859 LSAMPQ13449 338 aa10.9□□□□□ -0.66
TRIM40-205ENST00000307859 CD226Q15762 336 aa10.9□□□□□ -0.66
TRIM40-205ENST00000307859 SYT14P1Q58G82 188 aa10.9□□□□□ -0.66
TRIM40-205ENST00000307859 ALG10BQ5I7T1 473 aa10.9□□□□□ -0.66
TRIM40-205ENST00000307859 FAAH2Q6GMR7 532 aa10.9□□□□□ -0.66
TRIM40-205ENST00000307859 MRPL14Q6P1L8 145 aaKnown RBP10.9□□□□□ -0.66
TRIM40-205ENST00000307859 APOOLQ6UXV4 268 aa10.9□□□□□ -0.66
TRIM40-205ENST00000307859 CCDC81Q6ZN84 652 aa10.9□□□□□ -0.66
TRIM40-205ENST00000307859 ERI1Q8IV48 349 aaKnown RBP10.9□□□□□ -0.66
TRIM40-205ENST00000307859 OR4Q3Q8NH05 313 aa10.9□□□□□ -0.66
TRIM40-205ENST00000307859 C9orf43Q8TAL5 461 aaPredicted RBP10.9□□□□□ -0.66
TRIM40-205ENST00000307859 TMEM163Q8TC26 289 aa10.9□□□□□ -0.66
TRIM40-205ENST00000307859 BRIX1Q8TDN6 353 aaKnown RBP10.9□□□□□ -0.66
TRIM40-205ENST00000307859 RAB2BQ8WUD1 216 aa10.9□□□□□ -0.66
TRIM40-205ENST00000307859 TP53INP1Q96A56 240 aa10.9□□□□□ -0.66
TRIM40-205ENST00000307859 LRFN5Q96NI6 719 aa10.9□□□□□ -0.66
TRIM40-205ENST00000307859 SLC38A2Q96QD8 506 aa10.9□□□□□ -0.66
TRIM40-205ENST00000307859 WDR77Q9BQA1 342 aaPredicted RBP10.9□□□□□ -0.66
TRIM40-205ENST00000307859 TSSK6Q9BXA6 273 aa10.9□□□□□ -0.66
TRIM40-205ENST00000307859 PRRG3Q9BZD7 231 aa10.9□□□□□ -0.66
TRIM40-205ENST00000307859 NRSN2Q9GZP1 204 aa10.9□□□□□ -0.66
TRIM40-205ENST00000307859 NAA50Q9GZZ1 169 aaKnown RBP10.9□□□□□ -0.66
TRIM40-205ENST00000307859 MEPEQ9NQ76 525 aaPredicted RBP10.9□□□□□ -0.66
TRIM40-205ENST00000307859 DNAJC27Q9NZQ0 273 aa10.9□□□□□ -0.66
TRIM40-205ENST00000307859 SELENONQ9NZV5 590 aa10.9□□□□□ -0.66
TRIM40-205ENST00000307859 KLK13Q9UKR3 277 aa10.9□□□□□ -0.66
TRIM40-205ENST00000307859 IGHV3-20A0A0C4DH32 117 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 A0A1W2PQD3 144 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 TLX2O43763 284 aaPredicted RBP10.89□□□□□ -0.67
TRIM40-205ENST00000307859 ICOSLGO75144 302 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 DBTP11182 482 aaKnown RBP10.89□□□□□ -0.67
TRIM40-205ENST00000307859 UBL4AP11441 157 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 HPGDP15428 266 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 PTNP21246 168 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 ABCD3P28288 659 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 IL12BP29460 328 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 CCKBRP32239 447 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 PNLIPRP2P54317 469 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 FXYD6P3P58550 94 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 PLCXD2Q0VAA5 305 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 SNAPC1Q16533 368 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 PGGHGQ32M88 737 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 LCN10Q6JVE6 187 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 RPL13AP3Q6NVV1 102 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 TMEM205Q6UW68 189 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 SLC16A12Q6ZSM3 486 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 ANKRD13BQ86YJ7 626 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 PRR22Q8IZ63 422 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 CADM2Q8N3J6 435 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 STX19Q8N4C7 294 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 APCDD1LQ8NCL9 501 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 RNF217Q8TC41 542 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 RHBDD1Q8TEB9 315 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 DNAJA4Q8WW22 397 aaPredicted RBP10.89□□□□□ -0.67
TRIM40-205ENST00000307859 METTL21AQ8WXB1 218 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 BPIFA2Q96DR5 249 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 OMA1Q96E52 524 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 YIPF6Q96EC8 236 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 CCNL2Q96S94 520 aaPredicted RBP10.89□□□□□ -0.67
TRIM40-205ENST00000307859 ADOQ96SZ5 270 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 CTRCQ99895 268 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 FUNDC2Q9BWH2 189 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 CDCA4Q9BXL8 241 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 DPH1Q9BZG8 443 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 WDR54Q9H977 334 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 ATP13A2Q9NQ11 1180 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 MED17Q9NVC6 651 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 ENPP5Q9UJA9 477 aa10.89□□□□□ -0.67
TRIM40-205ENST00000307859 RPL36Q9Y3U8 105 aaKnown RBP10.89□□□□□ -0.67
TRIM40-205ENST00000307859 A0A087WUJ7 227 aa10.88□□□□□ -0.67
TRIM40-205ENST00000307859 CDC14CA4D256 554 aa10.88□□□□□ -0.67
TRIM40-205ENST00000307859 SURF4O15260 269 aa10.88□□□□□ -0.67
TRIM40-205ENST00000307859 ZNF264O43296 627 aa10.88□□□□□ -0.67
TRIM40-205ENST00000307859 OIP5O43482 229 aa10.88□□□□□ -0.67
TRIM40-205ENST00000307859 AHCYL1O43865 530 aa10.88□□□□□ -0.67
TRIM40-205ENST00000307859 NOL3O60936 208 aaKnown RBP10.88□□□□□ -0.67
TRIM40-205ENST00000307859 REM1O75628 298 aa10.88□□□□□ -0.67
TRIM40-205ENST00000307859 RFPL3O75679 317 aa10.88□□□□□ -0.67
TRIM40-205ENST00000307859 ATE1O95260 518 aa10.88□□□□□ -0.67
TRIM40-205ENST00000307859 LCKP06239 509 aa10.88□□□□□ -0.67
TRIM40-205ENST00000307859 CCL4P13236 92 aa10.88□□□□□ -0.67
TRIM40-205ENST00000307859 ZNF28P17035 718 aa10.88□□□□□ -0.67
TRIM40-205ENST00000307859 RNF4P78317 190 aa10.88□□□□□ -0.67
TRIM40-205ENST00000307859 ZNF91Q05481 1191 aa10.88□□□□□ -0.67
TRIM40-205ENST00000307859 PLAG1Q6DJT9 500 aa10.88□□□□□ -0.67
TRIM40-205ENST00000307859 SLC30A6Q6NXT4 461 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms