RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 ELAVL4P26378 380 aaKnown RBP8.56□□□□□ -1.04
PTPRE-202ENST00000306042 MAPK3P27361 379 aaPredicted RBP8.56□□□□□ -1.04
PTPRE-202ENST00000306042 P2RX1P51575 399 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 IL18R1Q13478 541 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 GAB1Q13480 694 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 NKG7Q16617 165 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 SLC25A25Q6KCM7 469 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 QSOX2Q6ZRP7 698 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 SHFQ7M4L6 423 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 KIF18BQ86Y91 864 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 PSD4Q8NDX1 1056 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 OR7G2Q8NG99 324 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 OR2Y1Q8NGV0 311 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 ENKURQ8TC29 256 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 RDH12Q96NR8 316 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 CNN2Q99439 309 aaKnown RBP8.56□□□□□ -1.04
PTPRE-202ENST00000306042 MND1Q9BWT6 205 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 PCDHGA1Q9Y5H4 931 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 CENPBD1B2RD01 187 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 P2RX6O15547 441 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 KDM4BO94953 1096 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 SERPINA7P05543 415 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 CHRM4P08173 479 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 CLDN17P56750 224 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 COL28A1Q2UY09 1125 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 TRIM16LQ309B1 348 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 XKR7Q5GH72 579 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 RBM48Q5RL73 367 aaKnown RBP8.56□□□□□ -1.04
PTPRE-202ENST00000306042 FCRL6Q6DN72 434 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 NIPAL3Q6P499 406 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 LANCL3Q6ZV70 420 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 CLIP4Q8N3C7 705 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 BCORP1Q8N888 145 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 HMGCLL1Q8TB92 370 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 CPPED1Q9BRF8 314 aaPredicted RBP8.56□□□□□ -1.04
PTPRE-202ENST00000306042 B3GNT4Q9C0J1 378 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 NMNAT1Q9HAN9 279 aaPredicted RBP8.56□□□□□ -1.04
PTPRE-202ENST00000306042 SLAMF8Q9P0V8 285 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 PHYHO14832 338 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 PTHP01270 115 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 TNFSF4P23510 183 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 FKBP2P26885 142 aaKnown RBP8.56□□□□□ -1.04
PTPRE-202ENST00000306042 PRKXP51817 358 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 PCBD1P61457 104 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 ERVK-25P63136 954 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 YBX1P67809 324 aaKnown RBP8.56□□□□□ -1.04
PTPRE-202ENST00000306042 MXD1Q05195 221 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 C19orf57Q0VDD7 668 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 FAM189A2Q15884 450 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 PIGGQ5H8A4 983 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 ZNF766Q5HY98 468 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 GALNTL5Q7Z4T8 443 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 C1orf216Q8TAB5 229 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 SPACA9Q96E40 222 aaPredicted RBP8.56□□□□□ -1.04
PTPRE-202ENST00000306042 TMEM80Q96HE8 168 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 TMEM121BQ9BXQ6 578 aaPredicted RBP8.56□□□□□ -1.04
PTPRE-202ENST00000306042 GHRLQ9UBU3 117 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 TMPRSS11EQ9UL52 423 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 EXOSC1Q9Y3B2 195 aaKnown RBP8.56□□□□□ -1.04
PTPRE-202ENST00000306042 SAGE2PA6NJ88 616 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 B4E171 279 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 AIREO43918 545 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 MMP11P24347 488 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 TSPAN7P41732 249 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 ZNF829Q3KNS6 432 aaPredicted RBP8.56□□□□□ -1.04
PTPRE-202ENST00000306042 PYDC2Q56P42 97 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 JMJD6Q6NYC1 403 aaPredicted RBP8.56□□□□□ -1.04
PTPRE-202ENST00000306042 C3orf33Q6P1S2 294 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 GRINAQ7Z429 371 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 IGFN1Q86VF2 1251 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 LRR1Q96L50 414 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 LRFN3Q9BTN0 628 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 APMAPQ9HDC9 416 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 TMEM9Q9P0T7 183 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 NOP16Q9Y3C1 178 aaKnown RBP8.56□□□□□ -1.04
PTPRE-202ENST00000306042 GRIP1Q9Y3R0 1128 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 CORINQ9Y5Q5 1042 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 KCNE1BA0A087WTH5 132 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 A0A087WV62 115 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 AGAP14A8MT82 685 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 ETHE1O95571 254 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 PNLIPRP2P54317 469 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 PDE7AQ13946 482 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 ACER2Q5QJU3 275 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 GPR139Q6DWJ6 353 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 PLBD1Q6P4A8 553 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 WWTR1Q9GZV5 400 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 NXF5Q9H1B4 397 aaKnown RBP8.55□□□□□ -1.04
PTPRE-202ENST00000306042 KAT8Q9H7Z6 458 aaKnown RBP8.55□□□□□ -1.04
PTPRE-202ENST00000306042 MCUBQ9NWR8 336 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 ING3Q9NXR8 418 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 TMEM181Q9P2C4 612 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 SH2B3Q9UQQ2 575 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 BTBD3Q9Y2F9 522 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 GPC6Q9Y625 555 aaPredicted RBP8.55□□□□□ -1.04
PTPRE-202ENST00000306042 TRAV36DV7A0A075B6V5 113 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 A0A1W2PPW3 197 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 A0A1W2PRQ8 180 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 A8MVM7 634 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 LCKP06239 509 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms