RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 CCDC71Q8IV32 467 aaPredicted RBP7.18□□□□□ -1.26
SF3B3-201ENST00000302516 RNF141Q8WVD5 230 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 TMIGD2Q96BF3 282 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 TSSK2Q96PF2 358 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 SMCO4Q9NRQ5 59 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 MOKQ9UQ07 419 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 USP54Q70EL1 1684 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 C2orf78A6NCI8 922 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 K7EPK0 472 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 SLC16A6O15403 523 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 RNGTTO60942 597 aaKnown RBP7.17□□□□□ -1.26
SF3B3-201ENST00000302516 HTR3BO95264 441 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 TNFSF8P32971 234 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 FASLGP48023 281 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 FAM71E2Q8N5Q1 922 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 ACVR1CQ8NER5 493 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 OR7G3Q8NG95 312 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 CREB3L4Q8TEY5 395 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 LMF1Q96S06 567 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 VAPAQ9P0L0 249 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 FBXL4Q9UKA2 621 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF705FA8MVS1 300 aaPredicted RBP7.17□□□□□ -1.26
SF3B3-201ENST00000302516 FOXD2O60548 495 aaPredicted RBP7.17□□□□□ -1.26
SF3B3-201ENST00000302516 DPM1O60762 260 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 CDC123O75794 336 aaPredicted RBP7.17□□□□□ -1.26
SF3B3-201ENST00000302516 CNOT4O95628 575 aaKnown RBP7.17□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF705DP0CH99 300 aaPredicted RBP7.17□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF705BP0CI00 300 aaPredicted RBP7.17□□□□□ -1.26
SF3B3-201ENST00000302516 PRKAR1BP31321 381 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 MC3RP41968 323 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 SHC2P98077 582 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 POU4F3Q15319 338 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 ARSJQ5FYB0 599 aaPredicted RBP7.17□□□□□ -1.26
SF3B3-201ENST00000302516 TRAPPC6BQ86SZ2 158 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 PXT1Q8NFP0 134 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 TAAR8Q969N4 342 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 SDC3O75056 442 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 FAM199XQ6PEV8 388 aaPredicted RBP7.17□□□□□ -1.26
SF3B3-201ENST00000302516 METTL4Q8N3J2 472 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 LRFN5Q96NI6 719 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 MICU1Q9BPX6 476 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 WASH6PQ9NQA3 447 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 EMCNQ9ULC0 261 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 HOXC13P31276 330 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 AHRP35869 848 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 VASH1Q7L8A9 365 aaPredicted RBP7.17□□□□□ -1.26
SF3B3-201ENST00000302516 TMEM200AQ86VY9 491 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 FRZBQ92765 325 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 RBMXL1Q96E39 390 aaKnown RBP7.17□□□□□ -1.26
SF3B3-201ENST00000302516 ARNT2Q9HBZ2 717 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 INIPQ9NRY2 104 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 IL37Q9NZH6 218 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 CACNG4Q9UBN1 327 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 SCN7AQ01118 1682 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 AIPO00170 330 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 ONECUT3O60422 494 aaPredicted RBP7.17□□□□□ -1.26
SF3B3-201ENST00000302516 PTNP21246 168 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 SSTR4P31391 388 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 SLC5A2P31639 672 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF133P52736 654 aaPredicted RBP7.17□□□□□ -1.26
SF3B3-201ENST00000302516 UBE2NP61088 152 aaKnown RBP7.17□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF266Q14584 549 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 NSDHLQ15738 373 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 TECPR1Q7Z6L1 1165 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 SLC30A7Q8NEW0 376 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 ZFYVE21Q9BQ24 234 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 NMNAT2Q9BZQ4 307 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 PIGMQ9H3S5 423 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 IL21RQ9HBE5 538 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 TIMM8BQ9Y5J9 83 aaPredicted RBP7.17□□□□□ -1.26
SF3B3-201ENST00000302516 TMEM200CA6NKL6 621 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 B4DXG7 233 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 EFNA3P52797 238 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 YIF1BQ5BJH7 314 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 CGB2Q6NT52 195 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF280BQ86YH2 543 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 Q8N9G6 341 aaPredicted RBP7.17□□□□□ -1.26
SF3B3-201ENST00000302516 LRRC15Q8TF66 581 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 UQCC2Q9BRT2 126 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 SAP130Q9H0E3 1048 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF286AQ9HBT8 521 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 TXNL4BQ9NX01 149 aaKnown RBP7.17□□□□□ -1.26
SF3B3-201ENST00000302516 SUSD2Q9UGT4 822 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 PGAP2Q9UHJ9 254 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 PCYT1BQ9Y5K3 369 aaPredicted RBP7.17□□□□□ -1.26
SF3B3-201ENST00000302516 ATAD5Q96QE3 1844 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 DDX60LQ5H9U9 1706 aaKnown RBP7.17□□□□□ -1.26
SF3B3-201ENST00000302516 IGKV6-21A0A0C4DH24 114 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 A0A0J9YY10 115 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 TUBAL3A6NHL2 446 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 IMPA2O14732 288 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 TMEM127O75204 238 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 PMS2P2O95744 297 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 IGHG1P01857 330 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF888P0CJ79 500 aaPredicted RBP7.17□□□□□ -1.26
SF3B3-201ENST00000302516 APLNRP35414 380 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 DHPSP49366 369 aaPredicted RBP7.17□□□□□ -1.26
SF3B3-201ENST00000302516 OR9A2Q8NGT5 310 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 FAM174AQ8TBP5 190 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 HRASLS5Q96KN8 279 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms