RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 NTN4Q9HB63 628 aa19.16■□□□□ 0.66
SMCO4-201ENST00000298966 CBLCQ9ULV8 474 aa19.16■□□□□ 0.66
SMCO4-201ENST00000298966 AGAP5A6NIR3 686 aa19.15■□□□□ 0.66
SMCO4-201ENST00000298966 GNGT2O14610 69 aa19.15■□□□□ 0.66
SMCO4-201ENST00000298966 ADAMDEC1O15204 470 aa19.15■□□□□ 0.66
SMCO4-201ENST00000298966 DNASE1P24855 282 aa19.15■□□□□ 0.66
SMCO4-201ENST00000298966 ARHGDIAP52565 204 aa19.15■□□□□ 0.66
SMCO4-201ENST00000298966 LIN52Q52LA3 116 aa19.15■□□□□ 0.66
SMCO4-201ENST00000298966 ZNF311Q5JNZ3 666 aa19.15■□□□□ 0.66
SMCO4-201ENST00000298966 OR2T5Q6IEZ7 315 aa19.15■□□□□ 0.66
SMCO4-201ENST00000298966 ZBTB49Q6ZSB9 765 aa19.15■□□□□ 0.66
SMCO4-201ENST00000298966 WDR53Q7Z5U6 358 aaPredicted RBP19.15■□□□□ 0.66
SMCO4-201ENST00000298966 CYP4Z1Q86W10 505 aa19.15■□□□□ 0.66
SMCO4-201ENST00000298966 OR5L2Q8NGL0 311 aa19.15■□□□□ 0.66
SMCO4-201ENST00000298966 OR5M3Q8NGP4 307 aa19.15■□□□□ 0.66
SMCO4-201ENST00000298966 OR2T29Q8NH02 315 aa19.15■□□□□ 0.66
SMCO4-201ENST00000298966 OR52P1PQ8NH57 321 aa19.15■□□□□ 0.66
SMCO4-201ENST00000298966 DOK4Q8TEW6 326 aa19.15■□□□□ 0.66
SMCO4-201ENST00000298966 PIK3R3Q92569 461 aa19.15■□□□□ 0.66
SMCO4-201ENST00000298966 SLC35B4Q969S0 331 aa19.15■□□□□ 0.66
SMCO4-201ENST00000298966 NRBF2Q96F24 287 aa19.15■□□□□ 0.66
SMCO4-201ENST00000298966 CIB1Q99828 191 aa19.15■□□□□ 0.66
SMCO4-201ENST00000298966 COQ10BQ9H8M1 238 aa19.15■□□□□ 0.66
SMCO4-201ENST00000298966 FAM32AQ9Y421 112 aaKnown RBP19.15■□□□□ 0.66
SMCO4-201ENST00000298966 ENPP4Q9Y6X5 453 aa19.15■□□□□ 0.66
SMCO4-201ENST00000298966 CTAG2O75638 210 aa19.14■□□□□ 0.65
SMCO4-201ENST00000298966 LGI1O95970 557 aa19.14■□□□□ 0.65
SMCO4-201ENST00000298966 RHCEP18577 417 aa19.14■□□□□ 0.65
SMCO4-201ENST00000298966 AQP4P55087 323 aa19.14■□□□□ 0.65
SMCO4-201ENST00000298966 DUSP7Q16829 419 aa19.14■□□□□ 0.65
SMCO4-201ENST00000298966 RNF220Q5VTB9 566 aa19.14■□□□□ 0.65
SMCO4-201ENST00000298966 NPSR1Q6W5P4 371 aa19.14■□□□□ 0.65
SMCO4-201ENST00000298966 HSDL2Q6YN16 418 aa19.14■□□□□ 0.65
SMCO4-201ENST00000298966 EPHX4Q8IUS5 362 aa19.14■□□□□ 0.65
SMCO4-201ENST00000298966 SMYD1Q8NB12 490 aa19.14■□□□□ 0.65
SMCO4-201ENST00000298966 OR10Q1Q8NGQ4 319 aa19.14■□□□□ 0.65
SMCO4-201ENST00000298966 ADIPOR1Q96A54 375 aa19.14■□□□□ 0.65
SMCO4-201ENST00000298966 RMND5BQ96G75 393 aaPredicted RBP19.14■□□□□ 0.65
SMCO4-201ENST00000298966 WWTR1Q9GZV5 400 aa19.14■□□□□ 0.65
SMCO4-201ENST00000298966 DLL4Q9NR61 685 aa19.14■□□□□ 0.65
SMCO4-201ENST00000298966 PLSCR2Q9NRY7 297 aa19.14■□□□□ 0.65
SMCO4-201ENST00000298966 OAZ3Q9UMX2 235 aa19.14■□□□□ 0.65
SMCO4-201ENST00000298966 SAC3D1A6NKF1 404 aa19.13■□□□□ 0.65
SMCO4-201ENST00000298966 IL33O95760 270 aa19.13■□□□□ 0.65
SMCO4-201ENST00000298966 IL7RP16871 459 aa19.13■□□□□ 0.65
SMCO4-201ENST00000298966 VLDLRP98155 873 aa19.13■□□□□ 0.65
SMCO4-201ENST00000298966 IQCCQ4KMZ1 466 aa19.13■□□□□ 0.65
SMCO4-201ENST00000298966 CMIPQ8IY22 773 aa19.13■□□□□ 0.65
SMCO4-201ENST00000298966 ZFP62Q8NB50 900 aaPredicted RBP19.13■□□□□ 0.65
SMCO4-201ENST00000298966 GPR32P1Q8NGA4 272 aa19.13■□□□□ 0.65
SMCO4-201ENST00000298966 TMBIM1Q969X1 311 aa19.13■□□□□ 0.65
SMCO4-201ENST00000298966 ZNF597Q96LX8 424 aa19.13■□□□□ 0.65
SMCO4-201ENST00000298966 ZNF300Q96RE9 604 aaPredicted RBP19.13■□□□□ 0.65
SMCO4-201ENST00000298966 DEFB126Q9BYW3 111 aa19.13■□□□□ 0.65
SMCO4-201ENST00000298966 POLR2J2Q9GZM3 115 aaKnown RBP19.13■□□□□ 0.65
SMCO4-201ENST00000298966 POLR2J3Q9H1A7 115 aaKnown RBP19.13■□□□□ 0.65
SMCO4-201ENST00000298966 LIME1Q9H400 295 aa19.13■□□□□ 0.65
SMCO4-201ENST00000298966 MKLN1Q9UL63 735 aa19.13■□□□□ 0.65
SMCO4-201ENST00000298966 ZNF443Q9Y2A4 671 aaPredicted RBP19.13■□□□□ 0.65
SMCO4-201ENST00000298966 DTX4Q9Y2E6 619 aa19.13■□□□□ 0.65
SMCO4-201ENST00000298966 RPH3AQ9Y2J0 694 aaPredicted RBP19.13■□□□□ 0.65
SMCO4-201ENST00000298966 LRCH1Q9Y2L9 728 aa19.13■□□□□ 0.65
SMCO4-201ENST00000298966 SH3GLB1Q9Y371 365 aa19.13■□□□□ 0.65
SMCO4-201ENST00000298966 GXYLT2A0PJZ3 443 aa19.12■□□□□ 0.65
SMCO4-201ENST00000298966 FCMRO60667 390 aa19.12■□□□□ 0.65
SMCO4-201ENST00000298966 NID1P14543 1247 aa19.12■□□□□ 0.65
SMCO4-201ENST00000298966 ENDOUP21128 410 aaKnown RBP19.12■□□□□ 0.65
SMCO4-201ENST00000298966 KRT20P35900 424 aa19.12■□□□□ 0.65
SMCO4-201ENST00000298966 NRG3P56975 720 aa19.12■□□□□ 0.65
SMCO4-201ENST00000298966 SMIM11AP58511 58 aa19.12■□□□□ 0.65
SMCO4-201ENST00000298966 RNF4P78317 190 aa19.12■□□□□ 0.65
SMCO4-201ENST00000298966 GPR68Q15743 365 aa19.12■□□□□ 0.65
SMCO4-201ENST00000298966 ZNF141Q15928 474 aa19.12■□□□□ 0.65
SMCO4-201ENST00000298966 FLYWCH1Q4VC44 716 aa19.12■□□□□ 0.65
SMCO4-201ENST00000298966 EMC4Q5J8M3 183 aa19.12■□□□□ 0.65
SMCO4-201ENST00000298966 CARM1Q86X55 608 aa19.12■□□□□ 0.65
SMCO4-201ENST00000298966 HIPK1Q86Z02 1210 aa19.12■□□□□ 0.65
SMCO4-201ENST00000298966 ZDHHC13Q8IUH4 622 aa19.12■□□□□ 0.65
SMCO4-201ENST00000298966 C9orf40Q8IXQ3 194 aa19.12■□□□□ 0.65
SMCO4-201ENST00000298966 CYP4Z2PQ8N1L4 340 aa19.12■□□□□ 0.65
SMCO4-201ENST00000298966 CBR4Q8N4T8 237 aa19.12■□□□□ 0.65
SMCO4-201ENST00000298966 ZNF441Q8N8Z8 693 aa19.12■□□□□ 0.65
SMCO4-201ENST00000298966 APCDD1LQ8NCL9 501 aa19.12■□□□□ 0.65
SMCO4-201ENST00000298966 OR5K1Q8NHB7 308 aa19.12■□□□□ 0.65
SMCO4-201ENST00000298966 ALPK1Q96QP1 1244 aa19.12■□□□□ 0.65
SMCO4-201ENST00000298966 ARHGDIGQ99819 225 aa19.12■□□□□ 0.65
SMCO4-201ENST00000298966 DEFB127Q9H1M4 99 aa19.12■□□□□ 0.65
SMCO4-201ENST00000298966 REEP1Q9H902 201 aa19.12■□□□□ 0.65
SMCO4-201ENST00000298966 NDUFAF4Q9P032 175 aa19.12■□□□□ 0.65
SMCO4-201ENST00000298966 ABCG2Q9UNQ0 655 aa19.12■□□□□ 0.65
SMCO4-201ENST00000298966 NSD1Q96L73 2696 aaPredicted RBP19.11■□□□□ 0.65
SMCO4-201ENST00000298966 ABCB7O75027 752 aa19.11■□□□□ 0.65
SMCO4-201ENST00000298966 NME6O75414 186 aaPredicted RBP19.11■□□□□ 0.65
SMCO4-201ENST00000298966 ZFAND5O76080 213 aa19.11■□□□□ 0.65
SMCO4-201ENST00000298966 ZNF23P17027 643 aa19.11■□□□□ 0.65
SMCO4-201ENST00000298966 NAGAP17050 411 aa19.11■□□□□ 0.65
SMCO4-201ENST00000298966 IFNA8P32881 189 aa19.11■□□□□ 0.65
SMCO4-201ENST00000298966 ATP12AP54707 1039 aa19.11■□□□□ 0.65
SMCO4-201ENST00000298966 LTBQ06643 244 aa19.11■□□□□ 0.65
SMCO4-201ENST00000298966 NRF1Q16656 503 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms