RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 B3GNT9Q6UX72 402 aa6.47□□□□□ -1.37
GAPVD1-202ENST00000297933 FAM57BQ71RH2 274 aa6.47□□□□□ -1.37
GAPVD1-202ENST00000297933 IL1F10Q8WWZ1 152 aa6.47□□□□□ -1.37
GAPVD1-202ENST00000297933 FEVQ99581 238 aa6.47□□□□□ -1.37
GAPVD1-202ENST00000297933 ZPBPQ9BS86 351 aa6.47□□□□□ -1.37
GAPVD1-202ENST00000297933 ST6GALNAC5Q9BVH7 336 aa6.47□□□□□ -1.37
GAPVD1-202ENST00000297933 SLC6A20Q9NP91 592 aa6.47□□□□□ -1.37
GAPVD1-202ENST00000297933 NDRG3Q9UGV2 375 aa6.47□□□□□ -1.37
GAPVD1-202ENST00000297933 TBX21Q9UL17 535 aa6.47□□□□□ -1.37
GAPVD1-202ENST00000297933 STUB1Q9UNE7 303 aa6.47□□□□□ -1.37
GAPVD1-202ENST00000297933 C5P01031 1676 aa6.47□□□□□ -1.37
GAPVD1-202ENST00000297933 SNAP29O95721 258 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 SQSTM1Q13501 440 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 ZNF423Q2M1K9 1284 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 TBC1D28Q2M2D7 210 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 PIGGQ5H8A4 983 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 TMEM244Q5VVB8 128 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 GPR139Q6DWJ6 353 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 PNPLA1Q8N8W4 532 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 OR4N2Q8NGD1 307 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 TAMM41Q96BW9 452 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 MSI2Q96DH6 328 aaKnown RBP6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 PRRC1Q96M27 445 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 FOXN4Q96NZ1 517 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 PRMT8Q9NR22 394 aaPredicted RBP6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 MYH11P35749 1972 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 TRAV27A0A087WT01 109 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 DCDC2BA2VCK2 349 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 PRAMEF25A6NGN4 478 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 KLK10O43240 276 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 EIF1BO60739 113 aaKnown RBP6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 MT-CO2P00403 227 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 IFNA7P01567 189 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 IL2RAP01589 272 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 IL2RGP31785 369 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 SLC1A3P43003 542 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 TMBIM6P55061 237 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 CD83Q01151 205 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 GPR50Q13585 617 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 SPHARQ15513 63 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 ZNF791Q3KP31 576 aaPredicted RBP6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 KHDC1LQ5JSQ8 128 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 ZNF684Q5T5D7 378 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 HES5Q5TA89 166 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 PAQR9Q6ZVX9 377 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 CPOQ8IVL8 374 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 LSM14AQ8ND56 463 aaKnown RBP6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 OR5J2Q8NH18 312 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 MUS81Q96NY9 551 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 HES7Q9BYE0 225 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 LIN28AQ9H9Z2 209 aaKnown RBP6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 MBNL1Q9NR56 388 aaKnown RBP6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 TREX1Q9NSU2 369 aa6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 KLF13Q9Y2Y9 288 aaPredicted RBP6.46□□□□□ -1.37
GAPVD1-202ENST00000297933 PCDH17O14917 1159 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 STSP08842 583 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 KCNJ10P78508 379 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 HOXC5Q00444 222 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 REEP5Q00765 189 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 LTC4SQ16873 150 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 ZNF517Q6ZMY9 492 aaPredicted RBP6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 PXKQ7Z7A4 578 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 CLEC14AQ86T13 490 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 CPEB3Q8NE35 698 aaKnown RBP6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 CD300LFQ8TDQ1 290 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 GPR148Q8TDV2 347 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 SLC37A2Q8TED4 501 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 PSMF1Q92530 271 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 TOMM40LQ969M1 308 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 BORCS7Q96B45 105 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 CREB3L1Q96BA8 519 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 ELF4Q99607 663 aaPredicted RBP6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 PHB2Q99623 299 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 IER2Q9BTL4 223 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 EGLN1Q9GZT9 426 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 ELOVL3Q9HB03 270 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 PTTG2Q9NZH5 202 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 TESQ9UGI8 421 aaKnown RBP6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 ATP23Q9Y6H3 246 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 A0A1W2PQ09 198 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 TVP23AA6NH52 213 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 TBX10O75333 385 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 LCN1P31025 176 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 CNR2P34972 360 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 SEC61A1P61619 476 aaKnown RBP6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 GABREP78334 506 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 RHEBQ15382 184 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 GTDC1Q4AE62 458 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 NKAIN1Q4KMZ8 207 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 C9orf152Q5JTZ5 239 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 CPZQ66K79 652 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 RPS19BP1Q86WX3 136 aaKnown RBP6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 ASCC1Q8N9N2 400 aaKnown RBP6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 LMNTD1Q8N9Z9 388 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 OR1E3Q8WZA6 343 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 TRIB1Q96RU8 372 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 ALG8Q9BVK2 526 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 GSTO2Q9H4Y5 243 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 AGAP5A6NIR3 686 aa6.46□□□□□ -1.38
GAPVD1-202ENST00000297933 CSO75390 466 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms