RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 GP1BBP13224 206 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 MYF6P23409 242 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 MSX1P28360 303 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 STARP49675 285 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 RNF144AP50876 292 aaPredicted RBP10.95□□□□□ -0.66
HMGB2-201ENST00000296503 ANXA11P50995 505 aaKnown RBP10.95□□□□□ -0.66
HMGB2-201ENST00000296503 SRYQ05066 204 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 SF3B4Q15427 424 aaKnown RBP eCLIP10.95□□□□□ -0.663e-8■■■■□ 23.6
HMGB2-201ENST00000296503 GPAT3Q53EU6 434 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 KRT80Q6KB66 452 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 HACD2Q6Y1H2 254 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 MSANTD1Q6ZTZ1 278 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 MISPQ8IVT2 679 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 CHDHQ8NE62 594 aaPredicted RBP10.95□□□□□ -0.66
HMGB2-201ENST00000296503 C12orf43Q96C57 262 aaKnown RBP10.95□□□□□ -0.66
HMGB2-201ENST00000296503 ARMC1Q9NVT9 282 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 MKLN1Q9UL63 735 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 FAM32AQ9Y421 112 aaKnown RBP10.95□□□□□ -0.66
HMGB2-201ENST00000296503 SPTAN1Q13813 2472 aaKnown RBP10.95□□□□□ -0.66
HMGB2-201ENST00000296503 PCNX3Q9H6A9 2034 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 PTPN13Q12923 2485 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 MED12Q93074 2177 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 A0A1W2PQD3 144 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 FCMRO60667 390 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 OCM2P0CE71 109 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 OCMP0CE72 109 aaPredicted RBP10.95□□□□□ -0.66
HMGB2-201ENST00000296503 PTGER4P35408 488 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 MRPL19P49406 292 aaKnown RBP10.95□□□□□ -0.66
HMGB2-201ENST00000296503 ATP4BP51164 291 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 RPS3AP61247 264 aaKnown RBP10.95□□□□□ -0.66
HMGB2-201ENST00000296503 ART3Q13508 389 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 SQLEQ14534 574 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 GANABQ14697 944 aaKnown RBP10.95□□□□□ -0.66
HMGB2-201ENST00000296503 MAPRE2Q15555 327 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 SPATS1Q496A3 300 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 KLHL26Q53HC5 615 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 RAET1LQ5VY80 246 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 RTL6Q6ICC9 239 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 SLC2A7Q6PXP3 512 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 BLOC1S3Q6QNY0 202 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 OLIG3Q7RTU3 272 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 SNX32Q86XE0 403 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 FUNDC1Q8IVP5 155 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 SLC15A3Q8IY34 581 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 TBC1D15Q8TC07 691 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 C17orf50Q8WW18 174 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 TMIGD2Q96BF3 282 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 ROPN1LQ96C74 230 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 C1GALT1C1Q96EU7 318 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 WDYHV1Q96HA8 205 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 NEURL2Q9BR09 285 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 TTYH2Q9BSA4 534 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 PRDM14Q9GZV8 571 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 COQ10BQ9H8M1 238 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 SLC6A13Q9NSD5 602 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 VDAC3Q9Y277 283 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 DOPEY1Q5JWR5 2465 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 UTP20O75691 2785 aaKnown RBP10.94□□□□□ -0.66
HMGB2-201ENST00000296503 IGLV3-32A0A0A0MS00 114 aa10.94□□□□□ -0.66
HMGB2-201ENST00000296503 FAM47E-STBD1D6RA91 191 aa10.94□□□□□ -0.66
HMGB2-201ENST00000296503 BOLA2-SMG1P6H3BVE0 249 aa10.94□□□□□ -0.66
HMGB2-201ENST00000296503 HMGN4O00479 90 aa10.94□□□□□ -0.66
HMGB2-201ENST00000296503 NR5A2O00482 541 aa10.94□□□□□ -0.66
HMGB2-201ENST00000296503 AIM2O14862 343 aa10.94□□□□□ -0.66
HMGB2-201ENST00000296503 HCRTR2O43614 444 aa10.94□□□□□ -0.66
HMGB2-201ENST00000296503 GLI4P10075 376 aa10.94□□□□□ -0.66
HMGB2-201ENST00000296503 AGAP20933 346 aa10.94□□□□□ -0.66
HMGB2-201ENST00000296503 CHMP24386 653 aa10.94□□□□□ -0.66
HMGB2-201ENST00000296503 COL8A1P27658 744 aa10.94□□□□□ -0.66
HMGB2-201ENST00000296503 CRATP43155 626 aa10.94□□□□□ -0.66
HMGB2-201ENST00000296503 GFRA1P56159 465 aa10.94□□□□□ -0.66
HMGB2-201ENST00000296503 CD226Q15762 336 aa10.94□□□□□ -0.66
HMGB2-201ENST00000296503 ZNF630Q2M218 657 aaPredicted RBP10.94□□□□□ -0.66
HMGB2-201ENST00000296503 DCST1Q5T197 706 aa10.94□□□□□ -0.66
HMGB2-201ENST00000296503 HEPHL1Q6MZM0 1159 aa10.94□□□□□ -0.66
HMGB2-201ENST00000296503 OR5M1Q8NGP8 315 aa10.94□□□□□ -0.66
HMGB2-201ENST00000296503 ZFP90Q8TF47 636 aa10.94□□□□□ -0.66
HMGB2-201ENST00000296503 CA5BP1Q8WTZ4 195 aa10.94□□□□□ -0.66
HMGB2-201ENST00000296503 GTF2H4Q92759 462 aa10.94□□□□□ -0.66
HMGB2-201ENST00000296503 TPT1P8Q9HAU6 139 aa10.94□□□□□ -0.66
HMGB2-201ENST00000296503 WDR45Q9Y484 360 aa10.94□□□□□ -0.66
HMGB2-201ENST00000296503 FAM215AQ9Y5M1 114 aa10.94□□□□□ -0.66
HMGB2-201ENST00000296503 PRSS44E7EML9 344 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 CLDN14O95500 239 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 NUDT14O95848 222 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 CPN1P15169 458 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 JUNBP17275 347 aaPredicted RBP10.93□□□□□ -0.66
HMGB2-201ENST00000296503 S100A1P23297 94 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 TMBIM6P55061 237 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 RCAN2Q14206 197 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 GLYR1Q49A26 553 aaPredicted RBP10.93□□□□□ -0.66
HMGB2-201ENST00000296503 GTDC1Q4AE62 458 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 COX20Q5RI15 118 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 PDZK1Q5T2W1 519 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 HIST2H2BCQ6DN03 193 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 ARSKQ6UWY0 536 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 CCDC71Q8IV32 467 aaPredicted RBP10.93□□□□□ -0.66
HMGB2-201ENST00000296503 GALNT4Q8N4A0 578 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 ASB5Q8WWX0 329 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 TRIB1Q96RU8 372 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms