RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 TRAV17A0A0B4J275 112 aa13.78□□□□□ -0.2
CCDC140-201ENST00000295226 CPSF4LA6NMK7 179 aaKnown RBP13.78□□□□□ -0.2
CCDC140-201ENST00000295226 SNPHO15079 494 aa13.78□□□□□ -0.2
CCDC140-201ENST00000295226 CLOCKO15516 846 aa13.78□□□□□ -0.2
CCDC140-201ENST00000295226 EIF4E2O60573 245 aaKnown RBP13.78□□□□□ -0.2
CCDC140-201ENST00000295226 PRSS23O95084 383 aa13.78□□□□□ -0.2
CCDC140-201ENST00000295226 RPL5P46777 297 aaKnown RBP13.78□□□□□ -0.2
CCDC140-201ENST00000295226 P2RX1P51575 399 aa13.78□□□□□ -0.2
CCDC140-201ENST00000295226 EPS8Q12929 822 aa13.78□□□□□ -0.2
CCDC140-201ENST00000295226 PLEKHN1Q494U1 663 aaPredicted RBP13.78□□□□□ -0.2
CCDC140-201ENST00000295226 NADK2Q4G0N4 442 aa13.78□□□□□ -0.2
CCDC140-201ENST00000295226 IQCCQ4KMZ1 466 aa13.78□□□□□ -0.2
CCDC140-201ENST00000295226 TIGD3Q6B0B8 471 aa13.78□□□□□ -0.2
CCDC140-201ENST00000295226 PLCZ1Q86YW0 608 aa13.78□□□□□ -0.2
CCDC140-201ENST00000295226 ZDHHC21Q8IVQ6 265 aa13.78□□□□□ -0.2
CCDC140-201ENST00000295226 MISPQ8IVT2 679 aa13.78□□□□□ -0.2
CCDC140-201ENST00000295226 OR4K17Q8NGC6 315 aa13.78□□□□□ -0.2
CCDC140-201ENST00000295226 OR5W2Q8NH69 310 aa13.78□□□□□ -0.2
CCDC140-201ENST00000295226 C9orf43Q8TAL5 461 aaPredicted RBP13.78□□□□□ -0.2
CCDC140-201ENST00000295226 OIT3Q8WWZ8 545 aa13.78□□□□□ -0.2
CCDC140-201ENST00000295226 MCHR1Q99705 422 aa13.78□□□□□ -0.2
CCDC140-201ENST00000295226 NDUFAF4Q9P032 175 aa13.78□□□□□ -0.2
CCDC140-201ENST00000295226 RHCGQ9UBD6 479 aa13.78□□□□□ -0.2
CCDC140-201ENST00000295226 CACNA1BQ00975 2339 aa13.77□□□□□ -0.2
CCDC140-201ENST00000295226 SAC3D1A6NKF1 404 aa13.77□□□□□ -0.21
CCDC140-201ENST00000295226 FAM166BA8MTA8 275 aa13.77□□□□□ -0.21
CCDC140-201ENST00000295226 SHISA8B8ZZ34 492 aa13.77□□□□□ -0.21
CCDC140-201ENST00000295226 SOCS2O14508 198 aa13.77□□□□□ -0.21
CCDC140-201ENST00000295226 CDK2AP1O14519 115 aa13.77□□□□□ -0.21
CCDC140-201ENST00000295226 NTN1O95631 604 aa13.77□□□□□ -0.21
CCDC140-201ENST00000295226 CLPTM1O96005 669 aa13.77□□□□□ -0.21
CCDC140-201ENST00000295226 IFNW1P05000 195 aa13.77□□□□□ -0.21
CCDC140-201ENST00000295226 IDH2P48735 452 aaKnown RBP13.77□□□□□ -0.21
CCDC140-201ENST00000295226 PIN1Q13526 163 aaPredicted RBP13.77□□□□□ -0.21
CCDC140-201ENST00000295226 ZNF169Q14929 603 aaPredicted RBP13.77□□□□□ -0.21
CCDC140-201ENST00000295226 Q6ZS92 163 aa13.77□□□□□ -0.21
CCDC140-201ENST00000295226 ZNF550Q7Z398 422 aa13.77□□□□□ -0.21
CCDC140-201ENST00000295226 CADM2Q8N3J6 435 aa13.77□□□□□ -0.21
CCDC140-201ENST00000295226 FADS6Q8N9I5 356 aa13.77□□□□□ -0.21
CCDC140-201ENST00000295226 TMEM178AQ8NBL3 297 aa13.77□□□□□ -0.21
CCDC140-201ENST00000295226 OR5M1Q8NGP8 315 aa13.77□□□□□ -0.21
CCDC140-201ENST00000295226 GPR119Q8TDV5 335 aa13.77□□□□□ -0.21
CCDC140-201ENST00000295226 TMEM41AQ96HV5 264 aa13.77□□□□□ -0.21
CCDC140-201ENST00000295226 RDH12Q96NR8 316 aa13.77□□□□□ -0.21
CCDC140-201ENST00000295226 IL1RAPQ9NPH3 570 aa13.77□□□□□ -0.21
CCDC140-201ENST00000295226 VDAC3Q9Y277 283 aa13.77□□□□□ -0.21
CCDC140-201ENST00000295226 ATRXP46100 2492 aa13.76□□□□□ -0.21
CCDC140-201ENST00000295226 IGLV3-32A0A0A0MS00 114 aa13.76□□□□□ -0.21
CCDC140-201ENST00000295226 KLRC4-KLRK1H3BQV0 150 aa13.76□□□□□ -0.21
CCDC140-201ENST00000295226 FFAR1O14842 300 aa13.76□□□□□ -0.21
CCDC140-201ENST00000295226 HPRP00739 348 aa13.76□□□□□ -0.21
CCDC140-201ENST00000295226 FABP3P05413 133 aa13.76□□□□□ -0.21
CCDC140-201ENST00000295226 MYBPC1Q00872 1141 aa13.76□□□□□ -0.21
CCDC140-201ENST00000295226 PLGLB1Q02325 96 aa13.76□□□□□ -0.21
CCDC140-201ENST00000295226 KCNC4Q03721 635 aa13.76□□□□□ -0.21
CCDC140-201ENST00000295226 LY6DQ14210 128 aa13.76□□□□□ -0.21
CCDC140-201ENST00000295226 GANABQ14697 944 aaKnown RBP13.76□□□□□ -0.21
CCDC140-201ENST00000295226 TOMM20Q15388 145 aa13.76□□□□□ -0.21
CCDC140-201ENST00000295226 RNFT1Q5M7Z0 435 aa13.76□□□□□ -0.21
CCDC140-201ENST00000295226 ENTPD8Q5MY95 495 aa13.76□□□□□ -0.21
CCDC140-201ENST00000295226 RELTQ969Z4 430 aa13.76□□□□□ -0.21
CCDC140-201ENST00000295226 SDCCAG3Q96C92 435 aa13.76□□□□□ -0.21
CCDC140-201ENST00000295226 ADI1Q9BV57 179 aa13.76□□□□□ -0.21
CCDC140-201ENST00000295226 ZFP64Q9NPA5 681 aa13.76□□□□□ -0.21
CCDC140-201ENST00000295226 EXOSC3Q9NQT5 275 aaKnown RBP13.76□□□□□ -0.21
CCDC140-201ENST00000295226 SMPD3Q9NY59 655 aaPredicted RBP13.76□□□□□ -0.21
CCDC140-201ENST00000295226 DNAJB9Q9UBS3 223 aa13.76□□□□□ -0.21
CCDC140-201ENST00000295226 OAZ3Q9UMX2 235 aa13.76□□□□□ -0.21
CCDC140-201ENST00000295226 MYRFQ9Y2G1 1151 aa13.76□□□□□ -0.21
CCDC140-201ENST00000295226 PCDHGB7Q9Y5F8 929 aa13.76□□□□□ -0.21
CCDC140-201ENST00000295226 ANKUB1A6NFN9 424 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 H0YAE9 185 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 DPM1O60762 260 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 SMIM18P0DKX4 95 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 ENDOUP21128 410 aaKnown RBP13.75□□□□□ -0.21
CCDC140-201ENST00000295226 PTNP21246 168 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 MYF6P23409 242 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 MST1P26927 711 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 MERTKQ12866 999 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 PPP1R8Q12972 351 aaKnown RBP13.75□□□□□ -0.21
CCDC140-201ENST00000295226 CBFBQ13951 182 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 QPRTQ15274 297 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 OR1Q1Q15612 314 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 ZSWIM7Q19AV6 140 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 SLC6A19Q695T7 634 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 EPHX4Q8IUS5 362 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 SVOPLQ8N434 492 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 TOR1AIP2Q8NFQ8 470 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 ZNF563Q8TA94 476 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 PHF10Q8WUB8 498 aaKnown RBP13.75□□□□□ -0.21
CCDC140-201ENST00000295226 ZNF300Q96RE9 604 aaPredicted RBP13.75□□□□□ -0.21
CCDC140-201ENST00000295226 TTTY12Q9BZ98 90 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 BOKQ9UMX3 212 aaPredicted RBP13.75□□□□□ -0.21
CCDC140-201ENST00000295226 LHX6Q9UPM6 363 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 B3GNT3Q9Y2A9 372 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 RPH3AQ9Y2J0 694 aaPredicted RBP13.75□□□□□ -0.21
CCDC140-201ENST00000295226 ENPP4Q9Y6X5 453 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 TLN1Q9Y490 2541 aaKnown RBP13.75□□□□□ -0.21
CCDC140-201ENST00000295226 SPENQ96T58 3664 aaKnown RBP13.75□□□□□ -0.21
CCDC140-201ENST00000295226 TRAPPC6AO75865 159 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms