RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 TRIM46Q7Z4K8 759 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 TMEM156Q8N614 296 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 OR7G3Q8NG95 312 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 GPR148Q8TDV2 347 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 CIDECQ96AQ7 238 aaPredicted RBP11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 PGAM5Q96HS1 289 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 ACTRT3Q9BYD9 372 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 SLC17A9Q9BYT1 436 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 DUSP15Q9H1R2 295 aaPredicted RBP11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 SYNPO2LQ9H987 977 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 INPP5EQ9NRR6 644 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 C19orf25Q9UFG5 118 aaPredicted RBP11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 ZDBF2Q9HCK1 2354 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 ZNF860A6NHJ4 632 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 NUPL2O15504 423 aaKnown RBP11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 BPIP17213 487 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 RABIFP47224 123 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 PRRT3Q5FWE3 981 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 GPR157Q5UAW9 335 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 COMTD1Q86VU5 262 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 TPRA1Q86W33 373 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 SVBPQ8N300 66 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 OR56B4Q8NH76 319 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 GGHQ92820 318 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 DPH7Q9BTV6 452 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 NTMT1Q9BV86 223 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 SLC6A5Q9Y345 797 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 C2orf74A8MZ97 194 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 LCMT2O60294 686 aaKnown RBP11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 LRP3O75074 770 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 RNH1P13489 461 aaKnown RBP11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 ZNF35P13682 527 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 ZNF84P51523 738 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 MFSD13AQ14CX5 517 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 PPA1Q15181 289 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 PMS2CLQ68D20 193 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 HMGN2P46Q86SG4 172 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 FAM83FQ8NEG4 500 aaPredicted RBP11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 BMFQ96LC9 184 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 PINK1Q9BXM7 581 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 SLC6A17Q9H1V8 727 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 ZNF736B4DX44 427 aaPredicted RBP11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 GIFP27352 417 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 GABRB3P28472 473 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 CD38P28907 300 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 ETV6P41212 452 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 SPINT3P49223 89 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 RPS15AP62244 130 aaKnown RBP11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 ELOAQ14241 798 aaKnown RBP11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 C14orf28Q4W4Y0 310 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 ACSM3Q53FZ2 586 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 PARS2Q7L3T8 475 aaKnown RBP11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 LRRC56Q8IYG6 542 aaPredicted RBP11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 LILRA2Q8N149 483 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 CBARPQ8N350 705 aaPredicted RBP11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 ZBTB44Q8NCP5 570 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 OLIG1Q8TAK6 271 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 STK35Q8TDR2 534 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 OR2M4Q96R27 311 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 RANGRFQ9HD47 186 aaPredicted RBP11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 RBFOX1Q9NWB1 397 aaKnown RBP11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 AK6Q9Y3D8 172 aaKnown RBP11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 PCDHA9Q9Y5H5 950 aa11.08□□□□□ -0.64
SYNGAP1-201ENST00000293748 K7ESF4 209 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 POLR2CP19387 275 aaPredicted RBP11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 BDKRB2P30411 391 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 GRPRP30550 384 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 RPS27AP62979 156 aaKnown RBP11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 UBA52P62987 128 aaKnown RBP11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 MEF2DQ14814 521 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 AFMIDQ63HM1 303 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 SFTPA1Q8IWL2 248 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 FAM160A2Q8N612 972 aaPredicted RBP11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 NAXEQ8NCW5 288 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 ARRDC3Q96B67 414 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 PRRT1Q99946 306 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 RPS10P5Q9NQ39 176 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 IL17CQ9P0M4 197 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 I6L893 689 aaPredicted RBP11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 M0R3H8 397 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 HPGDSO60760 199 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 GABARAPO95166 117 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 ADPRHP54922 357 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 C18orf21Q32NC0 220 aaPredicted RBP11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 LEG1Q6P5S2 330 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 LACC1Q8IV20 430 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 DNAJC22Q8N4W6 341 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 C12orf45Q8N5I9 185 aaPredicted RBP11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 SPRYD4Q8WW59 207 aaPredicted RBP11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 ELP4Q96EB1 424 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 PRRC1Q96M27 445 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 C3orf30Q96M34 536 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 IL17FQ96PD4 163 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 ARNT2Q9HBZ2 717 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 ALKBH4Q9NXW9 302 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 USP36Q9P275 1121 aaKnown RBP11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 KLHL42Q9P2K6 505 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 RASD1Q9Y272 281 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 THEGLP0DJG4 465 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 PLP2Q04941 152 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms