RNA–Protein interactions for RNA: ENST00000292510.5

VPS28-201, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-201ENST00000292510 ME2P23368 584 aa12.02□□□□□ -0.49
VPS28-201ENST00000292510 SLC6A2P23975 617 aa12.02□□□□□ -0.49
VPS28-201ENST00000292510 ADH6P28332 368 aa12.02□□□□□ -0.49
VPS28-201ENST00000292510 HTR1EP28566 365 aa12.02□□□□□ -0.49
VPS28-201ENST00000292510 CEACAM8P31997 349 aaPredicted RBP12.02□□□□□ -0.49
VPS28-201ENST00000292510 EIF1AXP47813 144 aaKnown RBP12.02□□□□□ -0.49
VPS28-201ENST00000292510 IDH2P48735 452 aaKnown RBP12.02□□□□□ -0.49
VPS28-201ENST00000292510 GZMMP51124 257 aa12.02□□□□□ -0.49
VPS28-201ENST00000292510 AGFG1P52594 562 aaKnown RBP12.02□□□□□ -0.49
VPS28-201ENST00000292510 ZNF136P52737 540 aa12.02□□□□□ -0.49
VPS28-201ENST00000292510 LARS2Q15031 903 aaKnown RBP12.02□□□□□ -0.49
VPS28-201ENST00000292510 CTU2Q2VPK5 515 aaKnown RBP12.02□□□□□ -0.49
VPS28-201ENST00000292510 ZNF311Q5JNZ3 666 aa12.02□□□□□ -0.49
VPS28-201ENST00000292510 PRAMEF8Q5VWM4 474 aa12.02□□□□□ -0.49
VPS28-201ENST00000292510 PRAMEF7Q5VXH5 474 aa12.02□□□□□ -0.49
VPS28-201ENST00000292510 REEP3Q6NUK4 255 aa12.02□□□□□ -0.49
VPS28-201ENST00000292510 CHMP1BQ7LBR1 199 aa12.02□□□□□ -0.49
VPS28-201ENST00000292510 NET1Q7Z628 596 aaPredicted RBP12.02□□□□□ -0.49
VPS28-201ENST00000292510 PIGWQ7Z7B1 504 aa12.02□□□□□ -0.49
VPS28-201ENST00000292510 COMTD1Q86VU5 262 aa12.02□□□□□ -0.49
VPS28-201ENST00000292510 GRAMD2AQ8IUY3 354 aa12.02□□□□□ -0.49
VPS28-201ENST00000292510 ZZZ3Q8IYH5 903 aa12.02□□□□□ -0.49
VPS28-201ENST00000292510 LILRA2Q8N149 483 aa12.02□□□□□ -0.49
VPS28-201ENST00000292510 METTL25Q8N6Q8 603 aa12.02□□□□□ -0.49
VPS28-201ENST00000292510 HIPK4Q8NE63 616 aa12.02□□□□□ -0.49
VPS28-201ENST00000292510 MBD3L2Q8NHZ7 208 aaPredicted RBP12.02□□□□□ -0.49
VPS28-201ENST00000292510 RP9Q8TA86 221 aaKnown RBP12.02□□□□□ -0.49
VPS28-201ENST00000292510 ASB5Q8WWX0 329 aa12.02□□□□□ -0.49
VPS28-201ENST00000292510 ST8SIA1Q92185 356 aa12.02□□□□□ -0.49
VPS28-201ENST00000292510 ADGRG7Q96K78 797 aa12.02□□□□□ -0.49
VPS28-201ENST00000292510 CACYBPQ9HB71 228 aaKnown RBP12.02□□□□□ -0.49
VPS28-201ENST00000292510 ACER3Q9NUN7 267 aa12.02□□□□□ -0.49
VPS28-201ENST00000292510 USP22Q9UPT9 525 aa12.02□□□□□ -0.49
VPS28-201ENST00000292510 IFT52Q9Y366 437 aa12.02□□□□□ -0.49
VPS28-201ENST00000292510 CENPEQ02224 2701 aa12.02□□□□□ -0.49
VPS28-201ENST00000292510 ARHGAP21Q5T5U3 1957 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 CFAP73A6NFT4 308 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 C19orf84I3L1E1 186 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 CXCL13O43927 109 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 IL2RAP01589 272 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 PRG2P13727 222 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 ETS2P15036 469 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 ELK4P28324 431 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 TIMP3P35625 211 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 SLC6A8P48029 635 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 EEFSECP57772 596 aaKnown RBP12.01□□□□□ -0.49
VPS28-201ENST00000292510 MERTKQ12866 999 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 EPS8Q12929 822 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 FOXF2Q12947 444 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 ART3Q13508 389 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 PON3Q15166 354 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 SGCBQ16585 318 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 TMEM176BQ3YBM2 270 aaPredicted RBP12.01□□□□□ -0.49
VPS28-201ENST00000292510 RNF220Q5VTB9 566 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 PPP4R4Q6NUP7 873 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 PLEKHM3Q6ZWE6 761 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 P4HA3Q7Z4N8 544 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 SERPINA11Q86U17 422 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 GCNT2Q8N0V5 402 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 PCYOX1LQ8NBM8 494 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 C11orf65Q8NCR3 313 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 OR8J3Q8NGG0 315 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 OR10D3Q8NH80 312 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 OR2V1Q8NHB1 315 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 LILRB4Q8NHJ6 448 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 FNDC9Q8TBE3 224 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 WNT2BQ93097 391 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 KLHL15Q96M94 604 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 UCN2Q96RP3 112 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 CCT8L2Q96SF2 557 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 SPATA9Q9BWV2 254 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 CTPS2Q9NRF8 586 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 GID8Q9NWU2 228 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 ZNF232Q9UNY5 417 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 ANGPT4Q9Y264 503 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 CACNA1CQ13936 2221 aa12.01□□□□□ -0.49
VPS28-201ENST00000292510 A0A1W2PNR3 127 aa12□□□□□ -0.49
VPS28-201ENST00000292510 SLC22A20A6NK97 555 aa12□□□□□ -0.49
VPS28-201ENST00000292510 CCT8L1PA6NM43 557 aa12□□□□□ -0.49
VPS28-201ENST00000292510 HSPB2A8KAH6 182 aa12□□□□□ -0.49
VPS28-201ENST00000292510 ADAMDEC1O15204 470 aa12□□□□□ -0.49
VPS28-201ENST00000292510 TPST1O60507 370 aa12□□□□□ -0.49
VPS28-201ENST00000292510 GCM2O75603 506 aaPredicted RBP12□□□□□ -0.49
VPS28-201ENST00000292510 NPPAP01160 153 aa12□□□□□ -0.49
VPS28-201ENST00000292510 OPN1SWP03999 348 aa12□□□□□ -0.49
VPS28-201ENST00000292510 GP1BBP13224 206 aa12□□□□□ -0.49
VPS28-201ENST00000292510 BMP5P22003 454 aa12□□□□□ -0.49
VPS28-201ENST00000292510 ACAA2P42765 397 aaKnown RBP12□□□□□ -0.49
VPS28-201ENST00000292510 RPS3AP61247 264 aaKnown RBP12□□□□□ -0.49
VPS28-201ENST00000292510 HOXC5Q00444 222 aa12□□□□□ -0.49
VPS28-201ENST00000292510 DMTNQ08495 405 aa12□□□□□ -0.49
VPS28-201ENST00000292510 RBBP4Q09028 425 aa12□□□□□ -0.49
VPS28-201ENST00000292510 SELENBP1Q13228 472 aa12□□□□□ -0.49
VPS28-201ENST00000292510 HSPB2Q16082 182 aa12□□□□□ -0.49
VPS28-201ENST00000292510 GLIPR1L2Q4G1C9 344 aa12□□□□□ -0.49
VPS28-201ENST00000292510 HBMQ6B0K9 141 aa12□□□□□ -0.49
VPS28-201ENST00000292510 ESPNLQ6ZVH7 1005 aa12□□□□□ -0.49
VPS28-201ENST00000292510 KRT73Q86Y46 540 aa12□□□□□ -0.49
VPS28-201ENST00000292510 RELL2Q8NC24 303 aaPredicted RBP12□□□□□ -0.49
VPS28-201ENST00000292510 TMEM234Q8WY98 164 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms