RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 LRRC3BQ96PB8 259 aa4.46□□□□□ -1.7
UBR1-201ENST00000290650 OR5B2Q96R09 309 aa4.46□□□□□ -1.7
UBR1-201ENST00000290650 G6PC3Q9BUM1 346 aa4.46□□□□□ -1.7
UBR1-201ENST00000290650 DPCDQ9BVM2 203 aaPredicted RBP4.46□□□□□ -1.7
UBR1-201ENST00000290650 METTL8Q9H825 291 aaKnown RBP4.46□□□□□ -1.7
UBR1-201ENST00000290650 DKKL1Q9UK85 242 aa4.46□□□□□ -1.7
UBR1-201ENST00000290650 FOXE1O00358 373 aaPredicted RBP4.46□□□□□ -1.7
UBR1-201ENST00000290650 UCHL1P09936 223 aa4.46□□□□□ -1.7
UBR1-201ENST00000290650 F8A1P23610 371 aa4.46□□□□□ -1.7
UBR1-201ENST00000290650 GDI2P50395 445 aaKnown RBP4.46□□□□□ -1.7
UBR1-201ENST00000290650 PITPNAQ00169 270 aa4.46□□□□□ -1.7
UBR1-201ENST00000290650 NTRK2Q16620 822 aa4.46□□□□□ -1.7
UBR1-201ENST00000290650 GGTA1PQ4G0N0 100 aa4.46□□□□□ -1.7
UBR1-201ENST00000290650 CCDC58Q4VC31 144 aa4.46□□□□□ -1.7
UBR1-201ENST00000290650 ESPNLQ6ZVH7 1005 aa4.46□□□□□ -1.7
UBR1-201ENST00000290650 MCEMP1Q8IX19 187 aa4.46□□□□□ -1.7
UBR1-201ENST00000290650 SLC35F2Q8IXU6 374 aa4.46□□□□□ -1.7
UBR1-201ENST00000290650 LRRC18Q8N456 261 aa4.46□□□□□ -1.7
UBR1-201ENST00000290650 ASB12Q8WXK4 309 aa4.46□□□□□ -1.7
UBR1-201ENST00000290650 METTL2AQ96IZ6 378 aaKnown RBP4.46□□□□□ -1.7
UBR1-201ENST00000290650 CMKLR1Q99788 373 aa4.46□□□□□ -1.7
UBR1-201ENST00000290650 CHST8Q9H2A9 424 aa4.46□□□□□ -1.7
UBR1-201ENST00000290650 PSORS1C1Q9UIG5 152 aa4.46□□□□□ -1.7
UBR1-201ENST00000290650 ING1Q9UK53 422 aaPredicted RBP4.46□□□□□ -1.7
UBR1-201ENST00000290650 PTPRDP23468 1912 aa4.46□□□□□ -1.7
UBR1-201ENST00000290650 FER1L5A0AVI2 2057 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 GABRPO00591 440 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 GAPDHSO14556 408 aaPredicted RBP4.45□□□□□ -1.7
UBR1-201ENST00000290650 DUX1O43812 170 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 CHRM4P08173 479 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 OR8G3PP0DMU2 310 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 RAB3BP20337 219 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 C4BPBP20851 252 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 RORAP35398 523 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 PTH2RP49190 550 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 AKR1D1P51857 326 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 CTBP2P56545 445 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 PSMA6P60900 246 aaKnown RBP4.45□□□□□ -1.7
UBR1-201ENST00000290650 DEFA5Q01523 94 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 PRKCDQ05655 676 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 ACSM3Q53FZ2 586 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 FAM27D1Q5T7N8 215 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 TMEM184AQ6ZMB5 413 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 ZNF836Q6ZNA1 936 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 PAQR7Q86WK9 346 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 RIMKLAQ8IXN7 391 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 ZNF283Q8N7M2 679 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 SPERTQ8NA61 448 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 OR7G2Q8NG99 324 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 CNOT9Q92600 299 aaKnown RBP4.45□□□□□ -1.7
UBR1-201ENST00000290650 MOAP1Q96BY2 351 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 RSPRY1Q96DX4 576 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 PITX2Q99697 317 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 NEURL2Q9BR09 285 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 TTYH1Q9H313 450 aaPredicted RBP4.45□□□□□ -1.7
UBR1-201ENST00000290650 TRPV4Q9HBA0 871 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 FSCN3Q9NQT6 498 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 PRDM9Q9NQV7 894 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 PPP4R1LQ9P1A2 415 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 TMPRSS11EQ9UL52 423 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 CACNA1EQ15878 2313 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 SELENOFO60613 162 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 DNAJB5O75953 348 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 H2BFMP0C1H6 154 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 ENDOUP21128 410 aaKnown RBP4.45□□□□□ -1.7
UBR1-201ENST00000290650 APEX1P27695 318 aaKnown RBP4.45□□□□□ -1.7
UBR1-201ENST00000290650 CTHP32929 405 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 AQP2P41181 271 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 FOXL2P58012 376 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 AGERQ15109 404 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 VWA2Q5GFL6 755 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 VASNQ6EMK4 673 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 CFAP77Q6ZQR2 320 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 GDF7Q7Z4P5 450 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 ZER1Q7Z7L7 766 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 ALDH16A1Q8IZ83 802 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 ZNF511Q8NB15 262 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 OR4N2Q8NGD1 307 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 OR2L8Q8NGY9 312 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 UBTD2Q8WUN7 234 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 FCAMRQ8WWV6 532 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 ASB15Q8WXK1 588 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 GAL3ST3Q96A11 431 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 ITPKCQ96DU7 683 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 FAM71F1Q96KD3 344 aaPredicted RBP4.45□□□□□ -1.7
UBR1-201ENST00000290650 TSSK2Q96PF2 358 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 PDCD1LG2Q9BQ51 273 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 KATNB1Q9BVA0 655 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 SLC2A4RGQ9NR83 387 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 SDHAF3Q9NRP4 125 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 ZNF701Q9NV72 531 aaPredicted RBP4.45□□□□□ -1.7
UBR1-201ENST00000290650 VWA8A3KMH1 1905 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 SCN4AP35499 1836 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 POM121CA8CG34 1229 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 PDCD5O14737 125 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 KLK3P07288 261 aaPredicted RBP4.45□□□□□ -1.7
UBR1-201ENST00000290650 YES1P07947 543 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 EDN3P14138 238 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 GPX2P18283 190 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 RPS19P39019 145 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms