RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 PDZD2O15018 2839 aa18.34■□□□□ 0.53
RAB28-201ENST00000288723 POLQO75417 2590 aa18.34■□□□□ 0.53
RAB28-201ENST00000288723 A0A1W2PNR3 127 aa18.34■□□□□ 0.53
RAB28-201ENST00000288723 ETV2O00321 342 aaPredicted RBP18.34■□□□□ 0.53
RAB28-201ENST00000288723 SYNGR4O95473 234 aa18.34■□□□□ 0.53
RAB28-201ENST00000288723 RPS4Y1P22090 263 aaKnown RBP18.34■□□□□ 0.53
RAB28-201ENST00000288723 MAGEA8P43361 318 aa18.34■□□□□ 0.53
RAB28-201ENST00000288723 MERTKQ12866 999 aa18.34■□□□□ 0.53
RAB28-201ENST00000288723 HSP90B2PQ58FF3 399 aa18.34■□□□□ 0.53
RAB28-201ENST00000288723 PDSS1Q5T2R2 415 aa18.34■□□□□ 0.53
RAB28-201ENST00000288723 LRIF1Q5T3J3 769 aa18.34■□□□□ 0.53
RAB28-201ENST00000288723 VRK2Q86Y07 508 aa18.34■□□□□ 0.53
RAB28-201ENST00000288723 ARFGAP2Q8N6H7 521 aa18.34■□□□□ 0.53
RAB28-201ENST00000288723 LINC01560Q8TB33 94 aa18.34■□□□□ 0.53
RAB28-201ENST00000288723 WDR60Q8WVS4 1066 aa18.34■□□□□ 0.53
RAB28-201ENST00000288723 STON2Q8WXE9 905 aa18.34■□□□□ 0.53
RAB28-201ENST00000288723 ST8SIA1Q92185 356 aa18.34■□□□□ 0.53
RAB28-201ENST00000288723 TMEM19Q96HH6 336 aa18.34■□□□□ 0.53
RAB28-201ENST00000288723 ZNF385DQ9H6B1 395 aa18.34■□□□□ 0.53
RAB28-201ENST00000288723 RLIMQ9NVW2 624 aa18.34■□□□□ 0.53
RAB28-201ENST00000288723 PAQR5Q9NXK6 330 aaPredicted RBP18.34■□□□□ 0.53
RAB28-201ENST00000288723 DNAJB12Q9NXW2 375 aaKnown RBP18.34■□□□□ 0.53
RAB28-201ENST00000288723 VAPAQ9P0L0 249 aa18.34■□□□□ 0.53
RAB28-201ENST00000288723 AP3D1O14617 1153 aa18.33■□□□□ 0.53
RAB28-201ENST00000288723 FCGR2AP12318 317 aa18.33■□□□□ 0.53
RAB28-201ENST00000288723 CPOXP36551 454 aa18.33■□□□□ 0.53
RAB28-201ENST00000288723 SELENBP1Q13228 472 aa18.33■□□□□ 0.53
RAB28-201ENST00000288723 PEX5LQ8IYB4 626 aa18.33■□□□□ 0.53
RAB28-201ENST00000288723 C10orf111Q8N326 155 aa18.33■□□□□ 0.53
RAB28-201ENST00000288723 TMEM120AQ9BXJ8 343 aa18.33■□□□□ 0.53
RAB28-201ENST00000288723 RABEP2Q9H5N1 569 aa18.33■□□□□ 0.53
RAB28-201ENST00000288723 COQ10BQ9H8M1 238 aa18.33■□□□□ 0.53
RAB28-201ENST00000288723 ACER3Q9NUN7 267 aa18.33■□□□□ 0.53
RAB28-201ENST00000288723 TRIM33Q9UPN9 1127 aa18.33■□□□□ 0.53
RAB28-201ENST00000288723 A0A1W2PP18 115 aa18.33■□□□□ 0.52
RAB28-201ENST00000288723 GJE1A6NN92 205 aa18.33■□□□□ 0.52
RAB28-201ENST00000288723 PLGP00747 810 aaPredicted RBP18.33■□□□□ 0.52
RAB28-201ENST00000288723 DBIP07108 87 aaKnown RBP18.33■□□□□ 0.52
RAB28-201ENST00000288723 CRISP3P54108 245 aa18.33■□□□□ 0.52
RAB28-201ENST00000288723 EEF1A1P68104 462 aaKnown RBP18.33■□□□□ 0.52
RAB28-201ENST00000288723 GUSBP1Q15486 140 aa18.33■□□□□ 0.52
RAB28-201ENST00000288723 MRPL2Q5T653 305 aaKnown RBP18.33■□□□□ 0.52
RAB28-201ENST00000288723 EEF1A1P5Q5VTE0 462 aa18.33■□□□□ 0.52
RAB28-201ENST00000288723 PLEKHM3Q6ZWE6 761 aa18.33■□□□□ 0.52
RAB28-201ENST00000288723 OR52P1PQ8NH57 321 aa18.33■□□□□ 0.52
RAB28-201ENST00000288723 TMEM234Q8WY98 164 aa18.33■□□□□ 0.52
RAB28-201ENST00000288723 SIKE1Q9BRV8 207 aa18.33■□□□□ 0.52
RAB28-201ENST00000288723 EXOSC3Q9NQT5 275 aaKnown RBP18.33■□□□□ 0.52
RAB28-201ENST00000288723 TMEM45AQ9NWC5 275 aa18.33■□□□□ 0.52
RAB28-201ENST00000288723 DSPPQ9NZW4 1301 aa18.32■□□□□ 0.52
RAB28-201ENST00000288723 TUBAL3A6NHL2 446 aa18.32■□□□□ 0.52
RAB28-201ENST00000288723 CGAP01215 116 aa18.32■□□□□ 0.52
RAB28-201ENST00000288723 VIMP08670 466 aaKnown RBP18.32■□□□□ 0.52
RAB28-201ENST00000288723 NID1P14543 1247 aa18.32■□□□□ 0.52
RAB28-201ENST00000288723 SLC7A1P30825 629 aa18.32■□□□□ 0.52
RAB28-201ENST00000288723 IDH2P48735 452 aaKnown RBP18.32■□□□□ 0.52
RAB28-201ENST00000288723 IRX1P78414 480 aaPredicted RBP18.32■□□□□ 0.52
RAB28-201ENST00000288723 CGB2Q6NT52 195 aa18.32■□□□□ 0.52
RAB28-201ENST00000288723 ZNF474Q6S9Z5 364 aaPredicted RBP18.32■□□□□ 0.52
RAB28-201ENST00000288723 FAM214BQ7L5A3 538 aa18.32■□□□□ 0.52
RAB28-201ENST00000288723 KIF18BQ86Y91 864 aa18.32■□□□□ 0.52
RAB28-201ENST00000288723 CMIPQ8IY22 773 aa18.32■□□□□ 0.52
RAB28-201ENST00000288723 DNAJA3Q96EY1 480 aa18.32■□□□□ 0.52
RAB28-201ENST00000288723 SLC24A3Q9HC58 644 aa18.32■□□□□ 0.52
RAB28-201ENST00000288723 CTPS2Q9NRF8 586 aa18.32■□□□□ 0.52
RAB28-201ENST00000288723 CALML5Q9NZT1 146 aa18.32■□□□□ 0.52
RAB28-201ENST00000288723 ANKHD1Q8IWZ3 2542 aaKnown RBP18.32■□□□□ 0.52
RAB28-201ENST00000288723 IGHV3-15A0A0B4J1V0 119 aa18.31■□□□□ 0.52
RAB28-201ENST00000288723 MSTNO14793 375 aa18.31■□□□□ 0.52
RAB28-201ENST00000288723 FAM27E3Q08E93 113 aa18.31■□□□□ 0.52
RAB28-201ENST00000288723 GNA13Q14344 377 aa18.31■□□□□ 0.52
RAB28-201ENST00000288723 ZNF239Q16600 458 aaKnown RBP18.31■□□□□ 0.52
RAB28-201ENST00000288723 C3orf33Q6P1S2 294 aa18.31■□□□□ 0.52
RAB28-201ENST00000288723 ZNF836Q6ZNA1 936 aa18.31■□□□□ 0.52
RAB28-201ENST00000288723 TMEM200AQ86VY9 491 aa18.31■□□□□ 0.52
RAB28-201ENST00000288723 ZNF610Q8N9Z0 462 aa18.31■□□□□ 0.52
RAB28-201ENST00000288723 ABHD3Q8WU67 409 aa18.31■□□□□ 0.52
RAB28-201ENST00000288723 OR5B2Q96R09 309 aa18.31■□□□□ 0.52
RAB28-201ENST00000288723 IKZF5Q9H5V7 419 aa18.31■□□□□ 0.52
RAB28-201ENST00000288723 THUMPD1Q9NXG2 353 aaKnown RBP18.31■□□□□ 0.52
RAB28-201ENST00000288723 TRBV5-3A0A0A0MS03 114 aa18.3■□□□□ 0.52
RAB28-201ENST00000288723 TMEM247A6NEH6 219 aa18.3■□□□□ 0.52
RAB28-201ENST00000288723 GKN3PP0CG01 181 aa18.3■□□□□ 0.52
RAB28-201ENST00000288723 CCNA2P20248 432 aa18.3■□□□□ 0.52
RAB28-201ENST00000288723 ENPP1P22413 925 aa18.3■□□□□ 0.52
RAB28-201ENST00000288723 DLEU7Q6UYE1 221 aa18.3■□□□□ 0.52
RAB28-201ENST00000288723 PMM1Q92871 262 aa18.3■□□□□ 0.52
RAB28-201ENST00000288723 CPNE4Q96A23 557 aaPredicted RBP18.3■□□□□ 0.52
RAB28-201ENST00000288723 GMPPAQ96IJ6 420 aaPredicted RBP18.3■□□□□ 0.52
RAB28-201ENST00000288723 CCDC106Q9BWC9 280 aa18.3■□□□□ 0.52
RAB28-201ENST00000288723 RAD21L1Q9H4I0 556 aa18.3■□□□□ 0.52
RAB28-201ENST00000288723 A4GALTQ9NPC4 353 aa18.3■□□□□ 0.52
RAB28-201ENST00000288723 TIGARQ9NQ88 270 aa18.3■□□□□ 0.52
RAB28-201ENST00000288723 SERINC1Q9NRX5 453 aa18.3■□□□□ 0.52
RAB28-201ENST00000288723 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.3■□□□□ 0.52
RAB28-201ENST00000288723 CREBBPQ92793 2442 aa18.3■□□□□ 0.52
RAB28-201ENST00000288723 TROVE2P10155 538 aaKnown RBP eCLIP18.3■□□□□ 0.52
RAB28-201ENST00000288723 KLK2P20151 261 aa18.3■□□□□ 0.52
RAB28-201ENST00000288723 PEX19P40855 299 aa18.3■□□□□ 0.52
RAB28-201ENST00000288723 CTBP2P56545 445 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms