RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 TESMINQ9Y4I5 508 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 PRRC2CQ9Y520 2896 aaKnown RBP19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 SHISA8B8ZZ34 492 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 ETV2O00321 342 aaPredicted RBP19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 DPM1O60762 260 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 HOXB6P17509 224 aaKnown RBP19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 DPP4P27487 766 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 SLC1A3P43003 542 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 CDH12P55289 794 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 HYAL4Q2M3T9 481 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 PLPPR5Q32ZL2 321 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 SLC6A19Q695T7 634 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 WBP2NLQ6ICG8 309 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 OR2T5Q6IEZ7 315 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 PLEKHM3Q6ZWE6 761 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 GDF7Q7Z4P5 450 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 AMIGO2Q86SJ2 522 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 OR2T29Q8NH02 315 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 POC1BQ8TC44 478 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 C3orf49Q96BT1 292 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 TAAR6Q96RI8 345 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 ZNF703Q9H7S9 590 aaPredicted RBP19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 TMEM27Q9HBJ8 222 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 FAM32AQ9Y421 112 aaKnown RBP19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 TCEA1P23193 301 aaKnown RBP19.77■□□□□ 0.76
PDLIM3-203ENST00000284771 RRM2P31350 389 aa19.77■□□□□ 0.76
PDLIM3-203ENST00000284771 IST1P53990 364 aa19.77■□□□□ 0.76
PDLIM3-203ENST00000284771 DSCR4P56555 118 aaPredicted RBP19.77■□□□□ 0.76
PDLIM3-203ENST00000284771 TAS2R41P59536 307 aa19.77■□□□□ 0.76
PDLIM3-203ENST00000284771 COPZ1P61923 177 aa19.77■□□□□ 0.76
PDLIM3-203ENST00000284771 RCN1Q15293 331 aa19.77■□□□□ 0.76
PDLIM3-203ENST00000284771 ZNF613Q6PF04 617 aa19.77■□□□□ 0.76
PDLIM3-203ENST00000284771 WDR88Q6ZMY6 472 aa19.77■□□□□ 0.76
PDLIM3-203ENST00000284771 PIK3C3Q8NEB9 887 aa19.77■□□□□ 0.76
PDLIM3-203ENST00000284771 SLC41A3Q96GZ6 507 aa19.77■□□□□ 0.76
PDLIM3-203ENST00000284771 DHRS1Q96LJ7 313 aa19.77■□□□□ 0.76
PDLIM3-203ENST00000284771 ZNF347Q96SE7 839 aa19.77■□□□□ 0.76
PDLIM3-203ENST00000284771 PRSS27Q9BQR3 290 aa19.77■□□□□ 0.76
PDLIM3-203ENST00000284771 HHATLQ9HCP6 504 aa19.77■□□□□ 0.76
PDLIM3-203ENST00000284771 LUZP4Q9P127 313 aa19.77■□□□□ 0.76
PDLIM3-203ENST00000284771 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.76■□□□□ 0.75
PDLIM3-203ENST00000284771 TRAPPC13A5PLN9 417 aa19.76■□□□□ 0.75
PDLIM3-203ENST00000284771 FAM166BA8MTA8 275 aa19.76■□□□□ 0.75
PDLIM3-203ENST00000284771 CLOCKO15516 846 aa19.76■□□□□ 0.75
PDLIM3-203ENST00000284771 EFNA2O43921 213 aa19.76■□□□□ 0.75
PDLIM3-203ENST00000284771 WISP2O76076 250 aa19.76■□□□□ 0.75
PDLIM3-203ENST00000284771 CELA3AP09093 270 aa19.76■□□□□ 0.75
PDLIM3-203ENST00000284771 FASP25445 335 aa19.76■□□□□ 0.75
PDLIM3-203ENST00000284771 MAGEA5P43359 124 aa19.76■□□□□ 0.75
PDLIM3-203ENST00000284771 DLX5P56178 289 aa19.76■□□□□ 0.75
PDLIM3-203ENST00000284771 LSM11P83369 360 aaKnown RBP eCLIP19.76■□□□□ 0.75
PDLIM3-203ENST00000284771 NKAIN4Q8IVV8 208 aa19.76■□□□□ 0.75
PDLIM3-203ENST00000284771 OFCC1Q8IZS5 231 aa19.76■□□□□ 0.75
PDLIM3-203ENST00000284771 TMEM251Q8N6I4 163 aa19.76■□□□□ 0.75
PDLIM3-203ENST00000284771 OR5M1Q8NGP8 315 aa19.76■□□□□ 0.75
PDLIM3-203ENST00000284771 OR52J3Q8NH60 311 aa19.76■□□□□ 0.75
PDLIM3-203ENST00000284771 SEMA6AQ9H2E6 1030 aa19.76■□□□□ 0.75
PDLIM3-203ENST00000284771 YY1AP1Q9H869 796 aa19.76■□□□□ 0.75
PDLIM3-203ENST00000284771 NKX1-2Q9UD57 310 aaPredicted RBP19.76■□□□□ 0.75
PDLIM3-203ENST00000284771 SLC7A7Q9UM01 511 aa19.76■□□□□ 0.75
PDLIM3-203ENST00000284771 U3KQV3 271 aa19.76■□□□□ 0.75
PDLIM3-203ENST00000284771 ZNF407Q9C0G0 2248 aa19.76■□□□□ 0.75
PDLIM3-203ENST00000284771 EPG5Q9HCE0 2579 aa19.76■□□□□ 0.75
PDLIM3-203ENST00000284771 CACNA1BQ00975 2339 aa19.76■□□□□ 0.75
PDLIM3-203ENST00000284771 OR5F1O95221 314 aa19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 UQCRBP14927 111 aa19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 TACR3P29371 465 aa19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 SRD5A2P31213 254 aa19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 ATP6AP1Q15904 470 aa19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 ALG10BQ5I7T1 473 aa19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 ULK3Q6PHR2 472 aa19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 LINC00114Q6XXX2 140 aa19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 TMEM179BQ7Z7N9 219 aa19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 Q8NA96 180 aa19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 ST8SIA1Q92185 356 aa19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 UBL7Q96S82 380 aaPredicted RBP19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 FNDC11Q9BVV2 318 aa19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 DNAJB9Q9UBS3 223 aa19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 OSGIN1Q9UJX0 560 aa19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 RPH3AQ9Y2J0 694 aaPredicted RBP19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 LYVE1Q9Y5Y7 322 aa19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 IL11P20809 199 aa19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 GDF1P27539 372 aa19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 LIMS1P48059 325 aa19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 ZNF41P51814 821 aaPredicted RBP19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 HMGA2P52926 109 aa19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 PPIAP62937 165 aaKnown RBP19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 PLGLB1Q02325 96 aa19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 FOXF1Q12946 379 aa19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 TMEM44Q2T9K0 475 aa19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 SLC25A53Q5H9E4 307 aa19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 COLEC12Q5KU26 742 aa19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 ATG4DQ86TL0 474 aaPredicted RBP19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 CYP4Z1Q86W10 505 aa19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 ADGRG3Q86Y34 549 aa19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 FAM83FQ8NEG4 500 aaPredicted RBP19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 SLC7A13Q8TCU3 470 aa19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 SLC38A4Q969I6 547 aa19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 FUZQ9BT04 418 aa19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 POLR2J2Q9GZM3 115 aaKnown RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms