RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 CACNG2Q9Y698 323 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 TRBV4-1A0A0J9YWV2 114 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 SERPINE2P07093 398 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 UGT2B7P16662 529 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 SERPINA2P20848 420 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 ADRA1AP35348 466 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 NFATC4Q14934 902 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 LILRA3Q8N6C8 439 aaPredicted RBP10.73□□□□□ -0.69
USP53-201ENST00000274030 TMEM269A0A1B0GVZ9 245 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 EDN3P14138 238 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 GAB1Q13480 694 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 LTB4RQ15722 352 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 FAM198BQ6UWH4 519 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 GPR149Q86SP6 731 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 CNTN4Q8IWV2 1026 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 SMIM3Q9BZL3 60 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 MCTS1Q9ULC4 181 aaKnown RBP10.72□□□□□ -0.69
USP53-201ENST00000274030 H3BNC9 293 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 UPK1BO75841 260 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 PTTG1O95997 202 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 IFNA1P01562 189 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 CRHBPP24387 322 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 AKR1C8PQ5T2L2 129 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 TBPL2Q6SJ96 375 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 SLC35D2Q76EJ3 337 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 GPR155Q7Z3F1 870 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 PPP1R3BQ86XI6 285 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 SGPP2Q8IWX5 399 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 COQ10AQ96MF6 247 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 NUMBLQ9Y6R0 609 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 NSG1A0A0A6YYJ2 146 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 FUOMA2VDF0 154 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 PAHP00439 452 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 KLKB1P03952 638 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 ZNF44P15621 663 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 ZNF136P52737 540 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 PKDCCQ504Y2 493 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 FAM43BQ6ZT52 329 aaPredicted RBP10.72□□□□□ -0.69
USP53-201ENST00000274030 OLIG3Q7RTU3 272 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 CMTM1Q8IZ96 169 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 ACBD4Q8NC06 268 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 OR51Q1Q8NH59 317 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 OR1S1Q8NH92 325 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 PIGCQ92535 297 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 SLC39A13Q96H72 371 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 BTBD2Q9BX70 525 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 CUTCQ9NTM9 273 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 SRPK3Q9UPE1 567 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 TCRBV3S1A0A5B6 114 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 RAB40BQ12829 278 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 PGGHGQ32M88 737 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 COX15Q7KZN9 410 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 RETREG3Q86VR2 466 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 VRK3Q8IV63 474 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 OR5K2Q8NHB8 316 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 ARRDC3Q96B67 414 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 ZNF597Q96LX8 424 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 ELOVL3Q9HB03 270 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 HHATLQ9HCP6 504 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 UBQLN4Q9NRR5 601 aa10.72□□□□□ -0.69
USP53-201ENST00000274030 F5H5P2 479 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 GAAP10253 952 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 CDK2P24941 298 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 IMPA1P29218 277 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 VASPP50552 380 aaPredicted RBP10.71□□□□□ -0.69
USP53-201ENST00000274030 CXADRP78310 365 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 NKAIN2Q5VXU1 208 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 C18orf63Q68DL7 685 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 GAREM2Q75VX8 874 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 COMMD7Q86VX2 200 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 OR2T11Q8NH01 316 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 GGHQ92820 318 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 NAA50Q9GZZ1 169 aaKnown RBP10.71□□□□□ -0.69
USP53-201ENST00000274030 KLHL13Q9P2N7 655 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 DHCR7Q9UBM7 475 aaKnown RBP10.71□□□□□ -0.69
USP53-201ENST00000274030 MYH7BA7E2Y1 1941 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 ANKRD30BLA7E2S9 258 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 OR7A17O14581 309 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 ZNF254O75437 659 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 B3GALT4O96024 378 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 GASTP01350 101 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 GIFP27352 417 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 IDUAP35475 653 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 TMEM53Q6P2H8 277 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 MEPCEQ7L2J0 689 aaKnown RBP10.71□□□□□ -0.69
USP53-201ENST00000274030 OR5D14Q8NGL3 314 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 ZIC5Q96T25 663 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 SULT4A1Q9BR01 284 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 ENKD1Q9H0I2 346 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 PCDHGA1Q9Y5H4 931 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 V9GY05 133 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 TSPAN15O95858 294 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 TMEM176BQ3YBM2 270 aaPredicted RBP10.71□□□□□ -0.69
USP53-201ENST00000274030 PLCXD3Q63HM9 321 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 STK35Q8TDR2 534 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 DUSP19Q8WTR2 217 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 RSC1A1Q92681 617 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 TIMM29Q9BSF4 260 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 OR10A5Q9H207 317 aa10.71□□□□□ -0.69
USP53-201ENST00000274030 OR10A2Q9H208 303 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms