RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 GIFP27352 417 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 EIF2DP41214 584 aaKnown RBP16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 PGGT1BP53609 377 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 FCRLBQ6BAA4 426 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 MFSD6LQ8IWD5 586 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 ZNF679Q8IYX0 411 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 KDM1BQ8NB78 822 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 OR4D6Q8NGJ1 314 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 OR51L1Q8NGJ5 315 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 GPX3P22352 226 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 MAP4K2Q12851 820 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 OR4K15Q8NH41 348 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 CHTF18Q8WVB6 975 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 MUL1Q969V5 352 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 OR2M2Q96R28 347 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 DCDC2BA2VCK2 349 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 MAMDC4Q6UXC1 1216 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 TOMM40LQ969M1 308 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 STRCQ7RTU9 1775 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 TCRBV3S1A0A5B6 114 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 WDR5P61964 334 aaKnown RBP16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 PIP5KL1Q5T9C9 394 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 SMCO4Q9NRQ5 59 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 GPR45Q9Y5Y3 372 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 FER1L5A0AVI2 2057 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 CD63P08962 238 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 TSFMP43897 325 aaKnown RBP16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 TAS2R30P59541 319 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 ZXDBP98169 803 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 GPR19Q15760 415 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 FAM180BQ6P0A1 224 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 KCTD12Q96CX2 325 aaKnown RBP16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 HIF1ANQ9NWT6 349 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 A0A087WUU8 490 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 A0A0J9YY10 115 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 K7ERQ8 282 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 SEC14L5O43304 696 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 EPHA1P21709 976 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 TLE1Q04724 770 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 TMEM201Q5SNT2 666 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 C1orf220Q5T0J3 134 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 RAP2BP61225 183 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 TGFBR3Q03167 851 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 ZCWPW2A0A1B0GU75 182 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 DPM1O60762 260 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 ETV4P43268 484 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 NEIL2Q969S2 332 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 ZNF75AQ96N20 296 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 NICN1Q9BSH3 213 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 C17orf105B2RV13 164 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 ZNF852Q6ZMS4 543 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 TMEM185AQ8NFB2 350 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 BPIFA2Q96DR5 249 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 HCAR1Q9BXC0 346 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 GPR62Q9BZJ7 368 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 ZDHHC7Q9NXF8 308 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 SLCO3A1Q9UIG8 710 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 IER3IP1Q9Y5U9 82 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 FOXE1O00358 373 aaPredicted RBP16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 ADAMTS4O75173 837 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 WBP2NLQ6ICG8 309 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 ZNF546Q86UE3 836 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 PRR18Q8N4B5 295 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 RBMXL1Q96E39 390 aaKnown RBP16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 PRR11Q96HE9 360 aaPredicted RBP16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 DHRS4Q9BTZ2 278 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 A6NCN8 305 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 H3BML4 177 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 GPR137BO60478 399 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 TK1P04183 234 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 PRPH2P23942 346 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 PCBD1P61457 104 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 ACTBL2Q562R1 376 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 ZNF322Q6U7Q0 402 aaPredicted RBP16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 CRTC1Q6UUV9 634 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 CPEB1Q9BZB8 566 aaKnown RBP16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 SLC38A1Q9H2H9 487 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 YARS2Q9Y2Z4 477 aaKnown RBP16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 IVDP26440 423 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 C18orf21Q32NC0 220 aaPredicted RBP16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 ACOT4Q8N9L9 421 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 MITD1Q8WV92 249 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 CLMPQ9H6B4 373 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 PROS1P07225 676 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 ADARB1P78563 741 aaKnown RBP16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 RUNX3Q13761 415 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 HABP2Q14520 560 aaPredicted RBP16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 MPEG1Q2M385 716 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 TMEM244Q5VVB8 128 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 SLC22A25Q6T423 547 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 IL17RDQ8NFM7 739 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 OR9K2Q8NGE7 335 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 PAQR8Q8TEZ7 354 aa16.4■□□□□ 0.22
NOTCH3-201ENST00000263388 RNF212BA8MTL3 300 aa16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 CD70P32970 193 aa16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 MAGEB1P43366 347 aa16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 ADGRG5Q8IZF4 528 aa16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 ACOT11Q8WXI4 607 aaPredicted RBP16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 UHRF1Q96T88 793 aaPredicted RBP16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 ALOXE3Q9BYJ1 711 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms