RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 HS6ST2Q96MM7 605 aa13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 TEAD3Q99594 435 aa13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 ZNF649Q9BS31 505 aa13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 DUXAA6NLW8 204 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 OR5F1O95221 314 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 MT-ND5P03915 603 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 FAM157BP0CG42 384 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 COL9A1P20849 921 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 STOMP27105 288 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 CMPK1P30085 196 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 DGCR2P98153 550 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 EXOSC7Q15024 291 aaKnown RBP13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 POU4F3Q15319 338 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 OR1Q1Q15612 314 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 MFSD12Q6NUT3 480 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 NIPAL3Q6P499 406 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 LUZP2Q86TE4 346 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 RANBP3LQ86VV4 465 aaPredicted RBP13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 SERPINA12Q8IW75 414 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 LRRC25Q8N386 305 aaPredicted RBP13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 ZNF655Q8N720 491 aaPredicted RBP13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 SFXN5Q8TD22 340 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 KCNJ15Q99712 375 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 CYSLTR2Q9NS75 346 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 CES1P1Q9UKY3 287 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 BDP1A6H8Y1 2624 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 CFAP54Q96N23 3096 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 TBC1D3DA0A087WVF3 549 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 TBC1D3IA0A087WXS9 549 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 TBC1D3EA0A087X179 549 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 TBC1D3KA0A087X1G2 549 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 CDHR4A6H8M9 788 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 TBC1D3FA6NER0 549 aaPredicted RBP13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 TBC1D3LB9A6J9 549 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 TBC1D3HP0C7X1 549 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 SLC6A1P30531 599 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 TBC1D3GQ6DHY5 549 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 TBC1D3CQ6IPX1 549 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 TBC1D3Q8IZP1 549 aaPredicted RBP13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 COX18Q8N8Q8 333 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 SRFBP1Q8NEF9 429 aaKnown RBP13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 C1QTNF2Q9BXJ5 285 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 TPSD1Q9BZJ3 242 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 SLC27A6Q9Y2P4 619 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 KIF26AQ9ULI4 1882 aaPredicted RBP13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 CHP2O43745 196 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 IGHA1P01876 353 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 FCER2P06734 321 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 HOXB2P14652 356 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 F8A1P23610 371 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 FOXK2Q01167 660 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 FZD5Q13467 585 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 SUZ12Q15022 739 aaKnown RBP13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 TMEM196Q5HYL7 178 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 SIAH3Q8IW03 269 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 FAM160A2Q8N612 972 aaPredicted RBP13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 OR4K14Q8NGD5 310 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 OR5J2Q8NH18 312 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 CREB3L1Q96BA8 519 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 BPIFA2Q96DR5 249 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 PTCHD1Q96NR3 888 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 GTPBP2Q9BX10 602 aaKnown RBP13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 DPAGT1Q9H3H5 408 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 NT5DC2Q9H857 520 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 KRCC1Q9NPI7 259 aaPredicted RBP13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 TMEM74BQ9NUR3 256 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 EIF3KQ9UBQ5 218 aaKnown RBP13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 FBXL21Q9UKT6 434 aa13.41□□□□□ -0.26
SFSWAP-201ENST00000261674 RIIAD1A6NNX1 92 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 SGK494L7N484 410 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 AHCYP23526 432 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 GRPRP30550 384 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 PRKAR1BP31321 381 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 MAGEB1P43366 347 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 ZNF81P51508 661 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 FGL2Q14314 439 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 TMEM44Q2T9K0 475 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 GXYLT1Q4G148 440 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 MRM1Q6IN84 353 aaKnown RBP13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 GID4Q8IVV7 300 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 FAM109AQ8N4B1 249 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 FAM98AQ8NCA5 519 aaKnown RBP13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 OR4K13Q8NH42 304 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 ZC3HAV1LQ96H79 300 aaKnown RBP13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 CCDC120Q96HB5 630 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 ZNF681Q96N22 645 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 SDF2Q99470 211 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 TMEM5Q9Y2B1 443 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 EXOGQ9Y2C4 368 aaKnown RBP13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 ARHGEF17Q96PE2 2063 aaPredicted RBP13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 TRAPPC13A5PLN9 417 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 TCRBP04435 133 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 PSMB10P40306 273 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 MTNR1BP49286 362 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 RPL6Q02878 288 aaKnown RBP13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 CST6Q15828 149 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 TIGD3Q6B0B8 471 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 TRILQ7L0X0 811 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 BMP8AQ7Z5Y6 402 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 MRGPREQ86SM8 312 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms