RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 RAB19A4D1S5 217 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 CPSF4LA6NMK7 179 aaKnown RBP6.71□□□□□ -1.33
CSDE1-201ENST00000261443 PYCARD-AS1I3L0S3 204 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 TO15178 435 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 B4GALT2O60909 372 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 ZNF821O75541 412 aaPredicted RBP6.71□□□□□ -1.33
CSDE1-201ENST00000261443 OAZ2O95190 189 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 EPPINO95925 133 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 PAK4O96013 591 aaPredicted RBP6.71□□□□□ -1.33
CSDE1-201ENST00000261443 KLKB1P03952 638 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 RLN1P04808 185 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 RB1P06400 928 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 VSIG10L2P0DP72 767 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 IRF1P10914 325 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 IMPA1P29218 277 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 NOS3P29474 1203 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 DCTDP32321 178 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 GPR4P46093 362 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 OMPP47874 163 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 SLC16A1P53985 500 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 PNLIPRP1P54315 467 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 SNTB1Q13884 538 aaKnown RBP6.71□□□□□ -1.33
CSDE1-201ENST00000261443 TRAM2Q15035 370 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 HENMT1Q5T8I9 393 aaKnown RBP6.71□□□□□ -1.33
CSDE1-201ENST00000261443 PIP5KL1Q5T9C9 394 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 TSSK4Q6SA08 328 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 ADCK2Q7Z695 626 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 ZNF467Q7Z7K2 595 aaPredicted RBP6.71□□□□□ -1.33
CSDE1-201ENST00000261443 GPRC5AQ8NFJ5 357 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 DMBX1Q8NFW5 382 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 OR2T33Q8NG76 320 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 OR2AK2Q8NG84 335 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 RXFP4Q8TDU9 374 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 SMAP2Q8WU79 429 aaPredicted RBP6.71□□□□□ -1.33
CSDE1-201ENST00000261443 SMPDL3AQ92484 453 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 WNT2BQ93097 391 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 VOPP1Q96AW1 172 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 TMEM169Q96HH4 297 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 ZNF285Q96NJ3 590 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 UTP23Q9BRU9 249 aaKnown RBP6.71□□□□□ -1.33
CSDE1-201ENST00000261443 PCOLCE2Q9UKZ9 415 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 TRPV2Q9Y5S1 764 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 IGLV3-16A0A075B6K0 115 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-201ENST00000261443 PRAMEF27A3QJZ7 478 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 OR2W5A6NFC9 320 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 NEDD8-MDP1E9PL57 170 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 SCAMP1O15126 338 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 AKR7A3O95154 331 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 GJB5O95377 273 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 CATP04040 527 aaKnown RBP6.71□□□□□ -1.34
CSDE1-201ENST00000261443 CBR1P16152 277 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 CENPAP49450 140 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 NRG3P56975 720 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 TAS2R43P59537 309 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 STXBP1P61764 594 aaKnown RBP6.71□□□□□ -1.34
CSDE1-201ENST00000261443 BLOC1S1P78537 153 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 STX4Q12846 297 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 PDZK1IP1Q13113 114 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 IL10RAQ13651 578 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 ZNF697Q5TEC3 545 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 OLFML2AQ68BL7 652 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 MEPCEQ7L2J0 689 aaKnown RBP6.71□□□□□ -1.34
CSDE1-201ENST00000261443 ZNF546Q86UE3 836 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 TEX19Q8NA77 164 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 DNAAF1Q8NEP3 725 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 OR56A3Q8NH54 315 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 ELP5Q8TE02 316 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 SETD7Q8WTS6 366 aaKnown RBP6.71□□□□□ -1.34
CSDE1-201ENST00000261443 TNFAIP8L1Q8WVP5 186 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 PTPN18Q99952 460 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 SLC38A1Q9H2H9 487 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 OR51M1Q9H341 326 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 MIOXQ9UGB7 285 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 CD84Q9UIB8 345 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 DTX4Q9Y2E6 619 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 KANTRA0A1W2PQU2 76 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 ANTXRLA6NF34 631 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 TMEM200CA6NKL6 621 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 EIF4E2O60573 245 aaKnown RBP6.71□□□□□ -1.34
CSDE1-201ENST00000261443 ARL6IP5O75915 188 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 MRPL3P09001 348 aaKnown RBP6.71□□□□□ -1.34
CSDE1-201ENST00000261443 ZDHHC11BP0C7U3 371 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 PTHLHP12272 177 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 S100PP25815 95 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 PYCR1P32322 319 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 MECP2P51608 486 aaKnown RBP6.71□□□□□ -1.34
CSDE1-201ENST00000261443 GPR143P51810 404 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 PRR5P85299 388 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 BEX3Q00994 111 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 CTXN3Q4LDR2 81 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 SLC6A19Q695T7 634 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-201ENST00000261443 LRRTM4Q86VH4 590 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 EID2Q8N6I1 236 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 C1orf216Q8TAB5 229 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 PGLYRP3Q96LB9 341 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 SAMD8Q96LT4 415 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 CAMK1GQ96NX5 476 aa6.71□□□□□ -1.34
CSDE1-201ENST00000261443 DERL3Q96Q80 235 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms