RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 SLAMF8Q9P0V8 285 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 CCL26Q9Y258 94 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 NHSL1Q5SYE7 1610 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 MBLAC1A4D2B0 266 aaPredicted RBP11.32□□□□□ -0.6
COL8A1-201ENST00000261037 LILRB3O75022 631 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 SERPINE2P07093 398 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 NUDT7P0C024 238 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 ALDH3B1P43353 468 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 DPY19L2P1Q6NXN4 242 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 TLDC1Q6P9B6 456 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 RFLNAQ6ZTI6 216 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 TECPR1Q7Z6L1 1165 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 GDPD1Q8N9F7 314 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 OR13C2Q8NGS9 318 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 SLAMF9Q96A28 289 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 TBC1D20Q96BZ9 403 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 ZNF845Q96IR2 970 aaPredicted RBP11.32□□□□□ -0.6
COL8A1-201ENST00000261037 NTMT1Q9BV86 223 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 NUBP2Q9Y5Y2 271 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 GPR45Q9Y5Y3 372 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 KIR2DS5A0A0G2JLQ3 304 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 A0A0G2JNG1 304 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 KIR2DS3K7RE56 304 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 CSF1P09603 554 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 CRHBPP24387 322 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 AOAHP28039 575 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 EVI2BP34910 448 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 KIR2DS5Q14953 304 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 FBXW12Q6X9E4 464 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 MEPCEQ7L2J0 689 aaKnown RBP11.32□□□□□ -0.6
COL8A1-201ENST00000261037 NDUFAF7Q7L592 441 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 BPHLQ86WA6 291 aaPredicted RBP11.32□□□□□ -0.6
COL8A1-201ENST00000261037 ADGRG5Q8IZF4 528 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 OR2T35Q8NGX2 323 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 TMEM163Q8TC26 289 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 ISG20Q96AZ6 181 aaKnown RBP11.32□□□□□ -0.6
COL8A1-201ENST00000261037 TXNDC15Q96J42 360 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 HHIPL1Q96JK4 782 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 ARL5BQ96KC2 179 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 CNTNAP3BQ96NU0 1288 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 FKRPQ9H9S5 495 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 PPP1R14DQ9NXH3 145 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 LOC285095A0A1B0GVY8 99 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 FAM155AB1AL88 458 aaPredicted RBP11.32□□□□□ -0.6
COL8A1-201ENST00000261037 LILRB5O75023 590 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 CBX7O95931 251 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 PENKP01210 267 aaPredicted RBP11.32□□□□□ -0.6
COL8A1-201ENST00000261037 CDK1P06493 297 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 FGFBP1Q14512 234 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 LEXMQ3ZCV2 418 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 PRAMEF20Q5VT98 475 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 OR7E24Q6IFN5 339 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 ZNF679Q8IYX0 411 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 ZFP90Q8TF47 636 aa11.32□□□□□ -0.6
COL8A1-201ENST00000261037 NSG1A0A0A6YYJ2 146 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 WASH4PA8MWX3 477 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 H3BNC9 293 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 DHRS4L1P0CG22 281 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 GAAP10253 952 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 RAB6AP20340 208 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 CD79BP40259 229 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 CX3CR1P49238 355 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 LSAMPQ13449 338 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 NFATC4Q14934 902 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 EXOSC6Q5RKV6 272 aaKnown RBP11.31□□□□□ -0.6
COL8A1-201ENST00000261037 SBSNQ6UWP8 590 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 LANCL3Q6ZV70 420 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 SNX18Q96RF0 628 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 TRBV4-1A0A0J9YWV2 114 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 SRPX2O60687 465 aaPredicted RBP11.31□□□□□ -0.6
COL8A1-201ENST00000261037 ZNF44P15621 663 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 HIST1H1TP22492 207 aaPredicted RBP11.31□□□□□ -0.6
COL8A1-201ENST00000261037 CD38P28907 300 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 VASPP50552 380 aaPredicted RBP11.31□□□□□ -0.6
COL8A1-201ENST00000261037 VEZF1Q14119 521 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 WBP2NLQ6ICG8 309 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 OR5D14Q8NGL3 314 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 HYLS1Q96M11 299 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 OLAHQ9NV23 265 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 OR6C2Q9NZP2 312 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 RASD1Q9Y272 281 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 CHD4Q14839 1912 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 ZNF322Q6U7Q0 402 aaPredicted RBP11.31□□□□□ -0.6
COL8A1-201ENST00000261037 COX15Q7KZN9 410 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 SPARTQ8N0X7 666 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 MRPL43Q8N983 215 aaKnown RBP11.31□□□□□ -0.6
COL8A1-201ENST00000261037 OR8J2Q8NGG1 315 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 NT5C3BQ969T7 300 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 AGPAT4Q9NRZ5 378 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 RFXAPO00287 272 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 SUSD5O60279 629 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 SERPINA7P05543 415 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 ALDOCP09972 364 aaKnown RBP11.31□□□□□ -0.6
COL8A1-201ENST00000261037 T-ENOLP0DO92 83 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 MSR1P21757 451 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 TAS2R20P59543 309 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 POU4F3Q15319 338 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 BEX5Q5H9J7 111 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 AGAP7PQ5VUJ5 663 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 AGAP6Q5VW22 663 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms