RNA–Protein interactions for RNA: ENST00000259460.12

RABEPK-201, Transcript of Rab9 effector protein with kelch motifs, humanhuman

TSL 1 (best) BASIC

Gene RABEPK, Length 1,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABEPK-201ENST00000259460 USH1CQ9Y6N9 552 aa12.79□□□□□ -0.36
RABEPK-201ENST00000259460 SCAMP2O15127 329 aaKnown RBP12.78□□□□□ -0.36
RABEPK-201ENST00000259460 UGT2B11O75310 529 aa12.78□□□□□ -0.36
RABEPK-201ENST00000259460 ATP1B1P05026 303 aa12.78□□□□□ -0.36
RABEPK-201ENST00000259460 BMP4P12644 408 aa12.78□□□□□ -0.36
RABEPK-201ENST00000259460 MPIP34949 423 aa12.78□□□□□ -0.36
RABEPK-201ENST00000259460 CHN2P52757 468 aa12.78□□□□□ -0.36
RABEPK-201ENST00000259460 EMX2Q04743 252 aa12.78□□□□□ -0.36
RABEPK-201ENST00000259460 PLCXD2Q0VAA5 305 aa12.78□□□□□ -0.36
RABEPK-201ENST00000259460 EXOSC7Q15024 291 aaKnown RBP12.78□□□□□ -0.36
RABEPK-201ENST00000259460 SMU1Q2TAY7 513 aa12.78□□□□□ -0.36
RABEPK-201ENST00000259460 ZNF385BQ569K4 471 aa12.78□□□□□ -0.36
RABEPK-201ENST00000259460 FAM111BQ6SJ93 734 aa12.78□□□□□ -0.36
RABEPK-201ENST00000259460 SLC22A25Q6T423 547 aa12.78□□□□□ -0.36
RABEPK-201ENST00000259460 ZFP28Q8NHY6 868 aa12.78□□□□□ -0.36
RABEPK-201ENST00000259460 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.78□□□□□ -0.36
RABEPK-201ENST00000259460 SORCS2Q96PQ0 1159 aa12.78□□□□□ -0.36
RABEPK-201ENST00000259460 WDR55Q9H6Y2 383 aaPredicted RBP12.78□□□□□ -0.36
RABEPK-201ENST00000259460 ESM1Q9NQ30 184 aa12.78□□□□□ -0.36
RABEPK-201ENST00000259460 MAT2BQ9NZL9 334 aa12.78□□□□□ -0.36
RABEPK-201ENST00000259460 NPAP1Q9NZP6 1156 aa12.78□□□□□ -0.36
RABEPK-201ENST00000259460 ZNF337Q9Y3M9 751 aa12.78□□□□□ -0.36
RABEPK-201ENST00000259460 PMF1-BGLAPU3KQ54 211 aa12.78□□□□□ -0.36
RABEPK-201ENST00000259460 B4DXG7 233 aa12.77□□□□□ -0.37
RABEPK-201ENST00000259460 NTN1O95631 604 aa12.77□□□□□ -0.37
RABEPK-201ENST00000259460 G6PDP11413 515 aa12.77□□□□□ -0.37
RABEPK-201ENST00000259460 AGTR1P30556 359 aa12.77□□□□□ -0.37
RABEPK-201ENST00000259460 GPC1P35052 558 aa12.77□□□□□ -0.37
RABEPK-201ENST00000259460 UBA52P62987 128 aaKnown RBP12.77□□□□□ -0.37
RABEPK-201ENST00000259460 MRPS35P82673 323 aaKnown RBP12.77□□□□□ -0.37
RABEPK-201ENST00000259460 CHRNB3Q05901 458 aa12.77□□□□□ -0.37
RABEPK-201ENST00000259460 HSPB3Q12988 150 aa12.77□□□□□ -0.37
RABEPK-201ENST00000259460 PPA1Q15181 289 aa12.77□□□□□ -0.37
RABEPK-201ENST00000259460 PRICKLE4Q2TBC4 344 aa12.77□□□□□ -0.37
RABEPK-201ENST00000259460 SLC9B1Q4ZJI4 515 aa12.77□□□□□ -0.37
RABEPK-201ENST00000259460 SZRD1Q7Z422 152 aa12.77□□□□□ -0.37
RABEPK-201ENST00000259460 GLCCI1Q86VQ1 547 aa12.77□□□□□ -0.37
RABEPK-201ENST00000259460 OR4K17Q8NGC6 315 aa12.77□□□□□ -0.37
RABEPK-201ENST00000259460 OR5M1Q8NGP8 315 aa12.77□□□□□ -0.37
RABEPK-201ENST00000259460 CIDECQ96AQ7 238 aaPredicted RBP12.77□□□□□ -0.37
RABEPK-201ENST00000259460 MTERF3Q96E29 417 aa12.77□□□□□ -0.37
RABEPK-201ENST00000259460 RADILQ96JH8 1075 aa12.77□□□□□ -0.37
RABEPK-201ENST00000259460 ZNF681Q96N22 645 aa12.77□□□□□ -0.37
RABEPK-201ENST00000259460 SNX18Q96RF0 628 aa12.77□□□□□ -0.37
RABEPK-201ENST00000259460 DPY30Q9C005 99 aa12.77□□□□□ -0.37
RABEPK-201ENST00000259460 OR10A5Q9H207 317 aa12.77□□□□□ -0.37
RABEPK-201ENST00000259460 ASIC5Q9NY37 505 aa12.77□□□□□ -0.37
RABEPK-201ENST00000259460 C17orf51A8MQB3 221 aa12.76□□□□□ -0.37
RABEPK-201ENST00000259460 MYO1GB0I1T2 1018 aa12.76□□□□□ -0.37
RABEPK-201ENST00000259460 POLR3GO15318 223 aaPredicted RBP12.76□□□□□ -0.37
RABEPK-201ENST00000259460 PCSK2P16519 638 aa12.76□□□□□ -0.37
RABEPK-201ENST00000259460 NAGAP17050 411 aa12.76□□□□□ -0.37
RABEPK-201ENST00000259460 EFNA1P20827 205 aaPredicted RBP12.76□□□□□ -0.37
RABEPK-201ENST00000259460 GPX3P22352 226 aa12.76□□□□□ -0.37
RABEPK-201ENST00000259460 EIF1AXP47813 144 aaKnown RBP12.76□□□□□ -0.37
RABEPK-201ENST00000259460 ZSWIM7Q19AV6 140 aa12.76□□□□□ -0.37
RABEPK-201ENST00000259460 PRSS53Q2L4Q9 553 aa12.76□□□□□ -0.37
RABEPK-201ENST00000259460 TMEM107Q6UX40 140 aa12.76□□□□□ -0.37
RABEPK-201ENST00000259460 LARP4Q71RC2 724 aaKnown RBP eCLIP12.76□□□□□ -0.372e-7■□□□□ 11.1
RABEPK-201ENST00000259460 MAVSQ7Z434 540 aa12.76□□□□□ -0.37
RABEPK-201ENST00000259460 LRRC34Q8IZ02 419 aa12.76□□□□□ -0.37
RABEPK-201ENST00000259460 KRTCAP2Q8N6L1 136 aa12.76□□□□□ -0.37
RABEPK-201ENST00000259460 ZDHHC22Q8N966 263 aa12.76□□□□□ -0.37
RABEPK-201ENST00000259460 ZNF540Q8NDQ6 660 aa12.76□□□□□ -0.37
RABEPK-201ENST00000259460 C17orf47Q8NEP4 570 aa12.76□□□□□ -0.37
RABEPK-201ENST00000259460 OR7A2PQ8NGA2 310 aa12.76□□□□□ -0.37
RABEPK-201ENST00000259460 ZNF675Q8TD23 568 aa12.76□□□□□ -0.37
RABEPK-201ENST00000259460 HPS1Q92902 700 aa12.76□□□□□ -0.37
RABEPK-201ENST00000259460 THOC1Q96FV9 657 aaKnown RBP12.76□□□□□ -0.37
RABEPK-201ENST00000259460 PRPF18Q99633 342 aaKnown RBP12.76□□□□□ -0.37
RABEPK-201ENST00000259460 SUCNR1Q9BXA5 334 aa12.76□□□□□ -0.37
RABEPK-201ENST00000259460 GLIPR2Q9H4G4 154 aa12.76□□□□□ -0.37
RABEPK-201ENST00000259460 MYOZ1Q9NP98 299 aaPredicted RBP12.76□□□□□ -0.37
RABEPK-201ENST00000259460 ATAD3AQ9NVI7 634 aa12.76□□□□□ -0.37
RABEPK-201ENST00000259460 CFL2Q9Y281 166 aa12.76□□□□□ -0.37
RABEPK-201ENST00000259460 NPIPA5A0A0B4J1W7 369 aa12.75□□□□□ -0.37
RABEPK-201ENST00000259460 NPIPA7E9PJI5 369 aa12.75□□□□□ -0.37
RABEPK-201ENST00000259460 PIN1P1O15428 100 aa12.75□□□□□ -0.37
RABEPK-201ENST00000259460 TBX19O60806 448 aa12.75□□□□□ -0.37
RABEPK-201ENST00000259460 ALDOCP09972 364 aaKnown RBP12.75□□□□□ -0.37
RABEPK-201ENST00000259460 NPIPA8P0DM63 369 aa12.75□□□□□ -0.37
RABEPK-201ENST00000259460 HK1P19367 917 aa12.75□□□□□ -0.37
RABEPK-201ENST00000259460 PRPS1L1P21108 318 aa12.75□□□□□ -0.37
RABEPK-201ENST00000259460 MANFP55145 182 aaKnown RBP12.75□□□□□ -0.37
RABEPK-201ENST00000259460 DSCR4P56555 118 aaPredicted RBP12.75□□□□□ -0.37
RABEPK-201ENST00000259460 NME5P56597 212 aa12.75□□□□□ -0.37
RABEPK-201ENST00000259460 GUCY1A3Q02108 690 aa12.75□□□□□ -0.37
RABEPK-201ENST00000259460 MAP4K2Q12851 820 aa12.75□□□□□ -0.37
RABEPK-201ENST00000259460 ZNF155Q12901 538 aaPredicted RBP12.75□□□□□ -0.37
RABEPK-201ENST00000259460 PDE7AQ13946 482 aa12.75□□□□□ -0.37
RABEPK-201ENST00000259460 CCNIQ14094 377 aa12.75□□□□□ -0.37
RABEPK-201ENST00000259460 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.75□□□□□ -0.37
RABEPK-201ENST00000259460 PGS1Q32NB8 556 aa12.75□□□□□ -0.37
RABEPK-201ENST00000259460 ZNF628Q5EBL2 1059 aa12.75□□□□□ -0.37
RABEPK-201ENST00000259460 CPTPQ5TA50 214 aa12.75□□□□□ -0.37
RABEPK-201ENST00000259460 OGFOD2Q6N063 350 aa12.75□□□□□ -0.37
RABEPK-201ENST00000259460 ZNF544Q6NX49 715 aa12.75□□□□□ -0.37
RABEPK-201ENST00000259460 TFAP2EQ6VUC0 442 aa12.75□□□□□ -0.37
RABEPK-201ENST00000259460 BHLHA15Q7RTS1 189 aaPredicted RBP12.75□□□□□ -0.37
RABEPK-201ENST00000259460 SPATA19Q7Z5L4 167 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms